RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 NKX2-5P52952 324 aaPredicted RBP12.62□□□□□ -0.39
HIPK3-202ENST00000379016 POU4F2Q12837 409 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 GGNBP1Q5YKI7 109 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 ZNF662Q6ZS27 426 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 FAM43BQ6ZT52 329 aaPredicted RBP12.62□□□□□ -0.39
HIPK3-202ENST00000379016 NRROSQ86YC3 692 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 PLD5Q8N7P1 536 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 CANT1Q8WVQ1 401 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 NELL2Q99435 816 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 SLC25A31Q9H0C2 315 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 CD300AQ9UGN4 299 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 RNF11Q9Y3C5 154 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 TMEM14AQ9Y6G1 99 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 CEMIPQ8WUJ3 1361 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 A0A0D9SG52 128 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 ADAM12O43184 909 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 CD48P09326 243 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 ZNF468Q5VIY5 522 aaPredicted RBP12.62□□□□□ -0.39
HIPK3-202ENST00000379016 FAM217AQ8IXS0 508 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 LRRC52Q8N7C0 313 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 OR4K13Q8NH42 304 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 WDR18Q9BV38 432 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 CHRNA9Q9UGM1 479 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 LOC102723971A0A1B0GUV8 181 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 MSTNO14793 375 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 NTF3P20783 257 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 CYCSP99999 105 aaKnown RBP12.62□□□□□ -0.39
HIPK3-202ENST00000379016 DNAJB8Q8NHS0 232 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 CNTNAP3Q9BZ76 1288 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 KCNK12Q9HB15 430 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 SACM1LQ9NTJ5 587 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 KIF25Q9UIL4 384 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 ASGR2P07307 311 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 METTL15P1P0C7V9 234 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 ACPPP15309 386 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 HADHBP55084 474 aaKnown RBP12.62□□□□□ -0.39
HIPK3-202ENST00000379016 SF3B4Q15427 424 aaKnown RBP eCLIP12.62□□□□□ -0.39
HIPK3-202ENST00000379016 NADK2Q4G0N4 442 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 ZFP57Q9NU63 452 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 SLC17A6Q9P2U8 582 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 POMPQ9Y244 141 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 VDAC3Q9Y277 283 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 AGAP14A8MT82 685 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 C17orf112F2Z3M2 114 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 TRAPPC2LH3BP13 241 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 NFYBP25208 207 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 PRDX3P30048 256 aaKnown RBP12.62□□□□□ -0.39
HIPK3-202ENST00000379016 EVX2Q03828 476 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 RBMS3Q6XE24 437 aaKnown RBP12.62□□□□□ -0.39
HIPK3-202ENST00000379016 C19orf35Q6ZS72 473 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 KDM8Q8N371 416 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 LNX1Q8TBB1 728 aaPredicted RBP12.62□□□□□ -0.39
HIPK3-202ENST00000379016 CPNE4Q96A23 557 aaPredicted RBP12.62□□□□□ -0.39
HIPK3-202ENST00000379016 PKP2Q99959 881 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 TUBA1CQ9BQE3 449 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 STEAP1Q9UHE8 339 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 CNTNAP4Q9C0A0 1308 aa12.62□□□□□ -0.39
HIPK3-202ENST00000379016 ALOX15BO15296 676 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 AOC2O75106 756 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 CFHP08603 1231 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 PPP2CBP62714 309 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 SLC35G1Q2M3R5 365 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 CTC1Q2NKJ3 1217 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 ARHGAP11BQ3KRB8 267 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 KHDC1Q4VXA5 237 aaKnown RBP12.61□□□□□ -0.39
HIPK3-202ENST00000379016 NHSL2Q5HYW2 709 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 GOLGA7Q7Z5G4 137 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 AGXT2Q9BYV1 514 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 MCTS1Q9ULC4 181 aaKnown RBP12.61□□□□□ -0.39
HIPK3-202ENST00000379016 PIGFQ07326 219 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 TEAD2Q15562 447 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 UPP1Q16831 310 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 SLC27A4Q6P1M0 643 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 BANPQ8N9N5 519 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 PPTC7Q8NI37 304 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 CAPNS2Q96L46 248 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 PITHD1Q9GZP4 211 aaPredicted RBP12.61□□□□□ -0.39
HIPK3-202ENST00000379016 MYH15Q9Y2K3 1946 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 PRAMEF27A3QJZ7 478 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 F6UZH7 168 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 GDF1P27539 372 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 PRDX6P30041 224 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 HTR3AP46098 478 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 SOX9P48436 509 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 PRAMEF9Q5VWM5 478 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 RNLSQ5VYX0 342 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 REEP3Q6NUK4 255 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 CELF5Q8N6W0 485 aaKnown RBP12.61□□□□□ -0.39
HIPK3-202ENST00000379016 OR51L1Q8NGJ5 315 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 HLA-CQ95604 372 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 TVP23CQ96ET8 276 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 ZNF597Q96LX8 424 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 FBXL18Q96ME1 805 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 FOXN4Q96NZ1 517 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 OR10A5Q9H207 317 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 OR10A2Q9H208 303 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 PCDHA9Q9Y5H5 950 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 TPT1P13693 172 aaKnown RBP12.61□□□□□ -0.39
HIPK3-202ENST00000379016 CES4AQ5XG92 561 aa12.61□□□□□ -0.39
HIPK3-202ENST00000379016 TAC4Q86UU9 113 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms