RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 E7EQ34 232 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 GOSR2O14653 212 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 GGCTO75223 188 aaKnown RBP11.14□□□□□ -0.63
NPHP4-202ENST00000378161 DFFBO76075 338 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 IGHV2-70P01814 119 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 MMP3P08254 477 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 OR4E1P0C645 316 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 HOXD8P13378 290 aaPredicted RBP11.14□□□□□ -0.63
NPHP4-202ENST00000378161 RAC1P63000 192 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 MRPS6P82932 125 aaKnown RBP11.14□□□□□ -0.63
NPHP4-202ENST00000378161 USP39Q53GS9 565 aaKnown RBP11.14□□□□□ -0.63
NPHP4-202ENST00000378161 SYT12Q8IV01 421 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 SLC43A2Q8N370 569 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 JAGN1Q8N5M9 183 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 KCTD13Q8WZ19 329 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 MRPS24Q96EL2 167 aaKnown RBP11.14□□□□□ -0.63
NPHP4-202ENST00000378161 AUP1Q9Y679 476 aa11.14□□□□□ -0.63
NPHP4-202ENST00000378161 CFAP20Q9Y6A4 193 aaKnown RBP11.14□□□□□ -0.63
NPHP4-202ENST00000378161 COL2A1P02458 1487 aaPredicted RBP11.13□□□□□ -0.63
NPHP4-202ENST00000378161 HYKKA2RU49 373 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 TVP23AA6NH52 213 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 VEGFDO43915 354 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 FMO6PO60774 539 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 FZD7O75084 574 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 SCG5P05408 212 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 EBLN1P0CF75 366 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 CHI3L1P36222 383 aaPredicted RBP11.13□□□□□ -0.63
NPHP4-202ENST00000378161 TMEM35AQ53FP2 167 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 CLEC20AQ6ZU45 233 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 OR56A3Q8NH54 315 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 HAPLN2Q9GZV7 340 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 HRH4Q9H3N8 390 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 GORASP2Q9H8Y8 452 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 TRPV4Q9HBA0 871 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 TP53TG5Q9Y2B4 290 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 SNX10Q9Y5X0 201 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 ANKRD36CQ5JPF3 1778 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 A0A1B0GUL6 1792 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 COL18A1P39060 1754 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 AGPAT2O15120 278 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 SIX3O95343 332 aaPredicted RBP11.13□□□□□ -0.63
NPHP4-202ENST00000378161 ADRB3P13945 408 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 AKR1A1P14550 325 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 AQP1P29972 269 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 BMI1P35226 326 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 LUMP51884 338 aaPredicted RBP11.13□□□□□ -0.63
NPHP4-202ENST00000378161 BCL2L1Q07817 233 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 HEPACAMQ14CZ8 416 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 DMRTA1Q5VZB9 504 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 C16orf59Q7L2K0 433 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 RAB42Q8N4Z0 105 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 OR5M9Q8NGP3 310 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 TMEM163Q8TC26 289 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 UBE2FQ969M7 185 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 SULT4A1Q9BR01 284 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 PARD6AQ9NPB6 346 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 MRPS23Q9Y3D9 190 aaKnown RBP11.13□□□□□ -0.63
NPHP4-202ENST00000378161 ADAM18Q9Y3Q7 739 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 TCRBV5S2A0A599 114 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 GABRDO14764 452 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 AQP8O94778 261 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 MT-ND4P03905 459 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 EPCAMP16422 314 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 CTSCP53634 463 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 FAM69AQ5T7M9 428 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 TAPT1Q6NXT6 567 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 DPPA4Q7L190 304 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 OR6V1Q8N148 313 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 DBF4BQ8NFT6 615 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 OR52P1PQ8NH57 321 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 L3HYPDHQ96EM0 354 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 ASB8Q9H765 288 aa11.13□□□□□ -0.63
NPHP4-202ENST00000378161 NLE1Q9NVX2 485 aaPredicted RBP11.13□□□□□ -0.63
NPHP4-202ENST00000378161 GDF2Q9UK05 429 aaPredicted RBP11.13□□□□□ -0.63
NPHP4-202ENST00000378161 SEC14L6B5MCN3 397 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 SGK494L7N484 410 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 ARVCFO00192 962 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 STBD1O95210 358 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 SMPD1P17405 629 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 TBXA2RP21731 343 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 CAV3P56539 151 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 SORDQ00796 357 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 ZNF79Q15937 498 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 HYAL4Q2M3T9 481 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 NHLRC3Q5JS37 347 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 LARP4Q71RC2 724 aaKnown RBP eCLIP11.12□□□□□ -0.63
NPHP4-202ENST00000378161 TMEM135Q86UB9 458 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 LDLRAD3Q86YD5 345 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 VRK3Q8IV63 474 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 MFSD8Q8NHS3 518 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 AUTS2Q8WXX7 1259 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 HGDQ93099 445 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 SPACA7Q96KW9 195 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 NOL4LQ96MY1 436 aaPredicted RBP11.12□□□□□ -0.63
NPHP4-202ENST00000378161 OR14A2Q96R54 314 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 PCYT2Q99447 389 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 ZPBPQ9BS86 351 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 FBXL4Q9UKA2 621 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 V9GYS6 101 aa11.12□□□□□ -0.63
NPHP4-202ENST00000378161 RRP8O43159 456 aaKnown RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms