RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 MALT1Q9UDY8 824 aa23.65■■□□□ 1.38
C9orf40-201ENST00000376854 GPSM3Q9Y4H4 160 aa23.65■■□□□ 1.38
C9orf40-201ENST00000376854 PRR23AA6NEV1 266 aa23.65■■□□□ 1.38
C9orf40-201ENST00000376854 CHST10O43529 356 aa23.65■■□□□ 1.38
C9orf40-201ENST00000376854 PIP5K1CO60331 668 aa23.65■■□□□ 1.38
C9orf40-201ENST00000376854 THY1P04216 161 aa23.65■■□□□ 1.38
C9orf40-201ENST00000376854 HLA-DPB1P04440 258 aa23.65■■□□□ 1.38
C9orf40-201ENST00000376854 CEACAM5P06731 702 aa23.65■■□□□ 1.38
C9orf40-201ENST00000376854 TSFMP43897 325 aaKnown RBP23.65■■□□□ 1.38
C9orf40-201ENST00000376854 BTN3A2P78410 334 aa23.65■■□□□ 1.38
C9orf40-201ENST00000376854 CDK10Q15131 360 aa23.65■■□□□ 1.38
C9orf40-201ENST00000376854 QPRTQ15274 297 aa23.65■■□□□ 1.38
C9orf40-201ENST00000376854 ZNF791Q3KP31 576 aaPredicted RBP23.65■■□□□ 1.38
C9orf40-201ENST00000376854 C6orf132Q5T0Z8 1188 aa23.65■■□□□ 1.38
C9orf40-201ENST00000376854 JPH3Q8WXH2 748 aaPredicted RBP23.65■■□□□ 1.38
C9orf40-201ENST00000376854 COQ7Q99807 217 aa23.65■■□□□ 1.38
C9orf40-201ENST00000376854 ATF6BQ99941 703 aa23.65■■□□□ 1.38
C9orf40-201ENST00000376854 SARGQ9BW04 601 aa23.65■■□□□ 1.38
C9orf40-201ENST00000376854 C6orf106Q9H6K1 298 aaPredicted RBP23.65■■□□□ 1.38
C9orf40-201ENST00000376854 MED17Q9NVC6 651 aa23.65■■□□□ 1.38
C9orf40-201ENST00000376854 EXOGQ9Y2C4 368 aaKnown RBP23.65■■□□□ 1.38
C9orf40-201ENST00000376854 A0A0B4J293 547 aa23.64■■□□□ 1.38
C9orf40-201ENST00000376854 GABRPO00591 440 aa23.64■■□□□ 1.38
C9orf40-201ENST00000376854 SCAMP1O15126 338 aa23.64■■□□□ 1.38
C9orf40-201ENST00000376854 NCR1O76036 304 aa23.64■■□□□ 1.38
C9orf40-201ENST00000376854 CA3P07451 260 aa23.64■■□□□ 1.38
C9orf40-201ENST00000376854 TEAD1P28347 426 aa23.64■■□□□ 1.38
C9orf40-201ENST00000376854 CMPK1P30085 196 aa23.64■■□□□ 1.38
C9orf40-201ENST00000376854 ATP6V1E1P36543 226 aa23.64■■□□□ 1.38
C9orf40-201ENST00000376854 STXBP1P61764 594 aaKnown RBP23.64■■□□□ 1.38
C9orf40-201ENST00000376854 TRIQKQ629K1 86 aa23.64■■□□□ 1.38
C9orf40-201ENST00000376854 ZNF620Q6ZNG0 422 aa23.64■■□□□ 1.38
C9orf40-201ENST00000376854 NRROSQ86YC3 692 aa23.64■■□□□ 1.38
C9orf40-201ENST00000376854 Q8N402 240 aa23.64■■□□□ 1.38
C9orf40-201ENST00000376854 ASCC1Q8N9N2 400 aaKnown RBP23.64■■□□□ 1.38
C9orf40-201ENST00000376854 NEIL3Q8TAT5 605 aa23.64■■□□□ 1.38
C9orf40-201ENST00000376854 UBASH3BQ8TF42 649 aa23.64■■□□□ 1.38
C9orf40-201ENST00000376854 SPRYD4Q8WW59 207 aaPredicted RBP23.64■■□□□ 1.38
C9orf40-201ENST00000376854 RNF31Q96EP0 1072 aa23.64■■□□□ 1.38
C9orf40-201ENST00000376854 ZNF649Q9BS31 505 aa23.64■■□□□ 1.38
C9orf40-201ENST00000376854 PPP1R3EQ9H7J1 279 aa23.64■■□□□ 1.38
C9orf40-201ENST00000376854 RANGRFQ9HD47 186 aaPredicted RBP23.64■■□□□ 1.38
C9orf40-201ENST00000376854 KLF4O43474 513 aa23.64■■□□□ 1.37
C9orf40-201ENST00000376854 HCN1O60741 890 aa23.64■■□□□ 1.37
C9orf40-201ENST00000376854 KAT7O95251 611 aa23.64■■□□□ 1.37
C9orf40-201ENST00000376854 SLC2A10O95528 541 aa23.64■■□□□ 1.37
C9orf40-201ENST00000376854 HTR1FP30939 366 aa23.64■■□□□ 1.37
C9orf40-201ENST00000376854 GJA4P35212 333 aa23.64■■□□□ 1.37
C9orf40-201ENST00000376854 INSL4Q14641 139 aa23.64■■□□□ 1.37
C9orf40-201ENST00000376854 MBOAT2Q6ZWT7 520 aa23.64■■□□□ 1.37
C9orf40-201ENST00000376854 C19orf18Q8NEA5 215 aa23.64■■□□□ 1.37
C9orf40-201ENST00000376854 SECISBP2Q96T21 854 aaKnown RBP23.64■■□□□ 1.37
C9orf40-201ENST00000376854 SOSTQ9BQB4 213 aa23.64■■□□□ 1.37
C9orf40-201ENST00000376854 CSNK1G3Q9Y6M4 447 aa23.64■■□□□ 1.37
C9orf40-201ENST00000376854 STON1Q9Y6Q2 735 aa23.64■■□□□ 1.37
C9orf40-201ENST00000376854 IGHA1P01876 353 aa23.63■■□□□ 1.37
C9orf40-201ENST00000376854 ERVK-21P61565 698 aa23.63■■□□□ 1.37
C9orf40-201ENST00000376854 GPM6BQ13491 265 aa23.63■■□□□ 1.37
C9orf40-201ENST00000376854 FAM214AQ32MH5 1076 aa23.63■■□□□ 1.37
C9orf40-201ENST00000376854 VITQ6UXI7 678 aa23.63■■□□□ 1.37
C9orf40-201ENST00000376854 SLC16A11Q8NCK7 471 aa23.63■■□□□ 1.37
C9orf40-201ENST00000376854 LYARQ9NX58 379 aaKnown RBP23.63■■□□□ 1.37
C9orf40-201ENST00000376854 H2AFY2Q9P0M6 372 aaPredicted RBP23.63■■□□□ 1.37
C9orf40-201ENST00000376854 CBLCQ9ULV8 474 aa23.63■■□□□ 1.37
C9orf40-201ENST00000376854 SHISA3A0PJX4 238 aa23.62■■□□□ 1.37
C9orf40-201ENST00000376854 GSAPA4D1B5 854 aa23.62■■□□□ 1.37
C9orf40-201ENST00000376854 ACSM1Q08AH1 577 aa23.62■■□□□ 1.37
C9orf40-201ENST00000376854 RPE65Q16518 533 aa23.62■■□□□ 1.37
C9orf40-201ENST00000376854 TJAP1Q5JTD0 557 aa23.62■■□□□ 1.37
C9orf40-201ENST00000376854 FAM111BQ6SJ93 734 aa23.62■■□□□ 1.37
C9orf40-201ENST00000376854 FRRS1Q6ZNA5 592 aa23.62■■□□□ 1.37
C9orf40-201ENST00000376854 TRIM48Q8IWZ4 208 aa23.62■■□□□ 1.37
C9orf40-201ENST00000376854 OR2T33Q8NG76 320 aa23.62■■□□□ 1.37
C9orf40-201ENST00000376854 OR52N1Q8NH53 320 aa23.62■■□□□ 1.37
C9orf40-201ENST00000376854 FYTTD1Q96QD9 318 aaKnown RBP23.62■■□□□ 1.37
C9orf40-201ENST00000376854 RSPH9Q9H1X1 276 aaPredicted RBP23.62■■□□□ 1.37
C9orf40-201ENST00000376854 ZNF443Q9Y2A4 671 aaPredicted RBP23.62■■□□□ 1.37
C9orf40-201ENST00000376854 BOLA1Q9Y3E2 137 aa23.62■■□□□ 1.37
C9orf40-201ENST00000376854 CDH10Q9Y6N8 788 aa23.62■■□□□ 1.37
C9orf40-201ENST00000376854 OR5F1O95221 314 aa23.62■■□□□ 1.37
C9orf40-201ENST00000376854 HLA-DQB1P01920 261 aa23.62■■□□□ 1.37
C9orf40-201ENST00000376854 PTNP21246 168 aa23.62■■□□□ 1.37
C9orf40-201ENST00000376854 MAP2K3P46734 347 aa23.62■■□□□ 1.37
C9orf40-201ENST00000376854 RACK1P63244 317 aaKnown RBP23.62■■□□□ 1.37
C9orf40-201ENST00000376854 SGCGQ13326 291 aa23.62■■□□□ 1.37
C9orf40-201ENST00000376854 P2RY14Q15391 338 aa23.62■■□□□ 1.37
C9orf40-201ENST00000376854 HEPHL1Q6MZM0 1159 aa23.62■■□□□ 1.37
C9orf40-201ENST00000376854 PLET1Q6UQ28 207 aa23.62■■□□□ 1.37
C9orf40-201ENST00000376854 MTSS1LQ765P7 747 aa23.62■■□□□ 1.37
C9orf40-201ENST00000376854 KCT2Q8NC54 265 aa23.62■■□□□ 1.37
C9orf40-201ENST00000376854 LILRB4Q8NHJ6 448 aa23.62■■□□□ 1.37
C9orf40-201ENST00000376854 CDS1Q92903 461 aa23.62■■□□□ 1.37
C9orf40-201ENST00000376854 WBP1LQ9NX94 342 aa23.62■■□□□ 1.37
C9orf40-201ENST00000376854 PAQR5Q9NXK6 330 aaPredicted RBP23.62■■□□□ 1.37
C9orf40-201ENST00000376854 NLGN3Q9NZ94 848 aa23.62■■□□□ 1.37
C9orf40-201ENST00000376854 SLC17A4Q9Y2C5 497 aa23.62■■□□□ 1.37
C9orf40-201ENST00000376854 GOLGA4Q13439 2230 aaKnown RBP23.62■■□□□ 1.37
C9orf40-201ENST00000376854 PRR19A6NJB7 356 aa23.61■■□□□ 1.37
C9orf40-201ENST00000376854 CD8B2A6NJW9 211 aa23.61■■□□□ 1.37
C9orf40-201ENST00000376854 DUXAA6NLW8 204 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms