RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 CEP70Q8NHQ1 597 aa13.33□□□□□ -0.28
HDAC6-204ENST00000376643 ZNF845Q96IR2 970 aaPredicted RBP13.33□□□□□ -0.28
HDAC6-204ENST00000376643 LMF2Q9BU23 707 aaKnown RBP13.33□□□□□ -0.28
HDAC6-204ENST00000376643 MED18Q9BUE0 208 aa13.33□□□□□ -0.28
HDAC6-204ENST00000376643 G6PC3Q9BUM1 346 aa13.33□□□□□ -0.28
HDAC6-204ENST00000376643 GSTO2Q9H4Y5 243 aa13.33□□□□□ -0.28
HDAC6-204ENST00000376643 ANKRA2Q9H9E1 313 aa13.33□□□□□ -0.28
HDAC6-204ENST00000376643 DLL4Q9NR61 685 aa13.33□□□□□ -0.28
HDAC6-204ENST00000376643 A0A087WZY1 265 aa13.32□□□□□ -0.28
HDAC6-204ENST00000376643 GOLGA8RI6L899 631 aa13.32□□□□□ -0.28
HDAC6-204ENST00000376643 UPK1AO00322 258 aa13.32□□□□□ -0.28
HDAC6-204ENST00000376643 SLC28A1O00337 649 aa13.32□□□□□ -0.28
HDAC6-204ENST00000376643 RGS14O43566 566 aa13.32□□□□□ -0.28
HDAC6-204ENST00000376643 FADS1O60427 444 aa13.32□□□□□ -0.28
HDAC6-204ENST00000376643 PSMG1O95456 288 aa13.32□□□□□ -0.28
HDAC6-204ENST00000376643 HSPA4LO95757 839 aa13.32□□□□□ -0.28
HDAC6-204ENST00000376643 POU2F1P14859 743 aa13.32□□□□□ -0.28
HDAC6-204ENST00000376643 PPP3CBP16298 524 aa13.32□□□□□ -0.28
HDAC6-204ENST00000376643 ZNF17P17021 662 aa13.32□□□□□ -0.28
HDAC6-204ENST00000376643 GCAP28676 217 aa13.32□□□□□ -0.28
HDAC6-204ENST00000376643 GPC1P35052 558 aa13.32□□□□□ -0.28
HDAC6-204ENST00000376643 KCNJ5P48544 419 aa13.32□□□□□ -0.28
HDAC6-204ENST00000376643 B3GALT5-AS1P59052 145 aa13.32□□□□□ -0.28
HDAC6-204ENST00000376643 SGCBQ16585 318 aa13.32□□□□□ -0.28
HDAC6-204ENST00000376643 NOXRED1Q6NXP6 359 aa13.32□□□□□ -0.28
HDAC6-204ENST00000376643 C20orf204Q6ZNR8 217 aa13.32□□□□□ -0.28
HDAC6-204ENST00000376643 FRMD7Q6ZUT3 714 aa13.32□□□□□ -0.28
HDAC6-204ENST00000376643 P3H2Q8IVL5 708 aa13.32□□□□□ -0.28
HDAC6-204ENST00000376643 MISPQ8IVT2 679 aa13.32□□□□□ -0.28
HDAC6-204ENST00000376643 METTL25Q8N6Q8 603 aa13.32□□□□□ -0.28
HDAC6-204ENST00000376643 CCDC63Q8NA47 563 aa13.32□□□□□ -0.28
HDAC6-204ENST00000376643 ELP4Q96EB1 424 aa13.32□□□□□ -0.28
HDAC6-204ENST00000376643 C1GALT1C1Q96EU7 318 aa13.32□□□□□ -0.28
HDAC6-204ENST00000376643 ZBED6CLQ96FA7 236 aaPredicted RBP13.32□□□□□ -0.28
HDAC6-204ENST00000376643 PGM2Q96G03 612 aa13.32□□□□□ -0.28
HDAC6-204ENST00000376643 C18orf12Q96KH6 178 aa13.32□□□□□ -0.28
HDAC6-204ENST00000376643 AMDHD1Q96NU7 426 aa13.32□□□□□ -0.28
HDAC6-204ENST00000376643 PINK1Q9BXM7 581 aa13.32□□□□□ -0.28
HDAC6-204ENST00000376643 GLIPR2Q9H4G4 154 aa13.32□□□□□ -0.28
HDAC6-204ENST00000376643 RNF122Q9H9V4 155 aa13.32□□□□□ -0.28
HDAC6-204ENST00000376643 PROCRQ9UNN8 238 aa13.32□□□□□ -0.28
HDAC6-204ENST00000376643 EMC9Q9Y3B6 208 aa13.32□□□□□ -0.28
HDAC6-204ENST00000376643 ZFHX3Q15911 3703 aa13.31□□□□□ -0.28
HDAC6-204ENST00000376643 IGLV3-32A0A0A0MS00 114 aa13.31□□□□□ -0.28
HDAC6-204ENST00000376643 NPIPB8E9PQR5 432 aa13.31□□□□□ -0.28
HDAC6-204ENST00000376643 C16orf97H3BN30 126 aa13.31□□□□□ -0.28
HDAC6-204ENST00000376643 CTIFO43310 598 aaKnown RBP13.31□□□□□ -0.28
HDAC6-204ENST00000376643 SMPD2O60906 423 aa13.31□□□□□ -0.28
HDAC6-204ENST00000376643 TGM6O95932 706 aa13.31□□□□□ -0.28
HDAC6-204ENST00000376643 PRPS2P11908 318 aa13.31□□□□□ -0.28
HDAC6-204ENST00000376643 HPGDP15428 266 aa13.31□□□□□ -0.28
HDAC6-204ENST00000376643 CD53P19397 219 aa13.31□□□□□ -0.28
HDAC6-204ENST00000376643 CRYGSP22914 178 aa13.31□□□□□ -0.28
HDAC6-204ENST00000376643 PRPH2P23942 346 aa13.31□□□□□ -0.28
HDAC6-204ENST00000376643 ADSLP30566 484 aaPredicted RBP13.31□□□□□ -0.28
HDAC6-204ENST00000376643 HOXC12P31275 282 aa13.31□□□□□ -0.28
HDAC6-204ENST00000376643 NKX6-1P78426 367 aaPredicted RBP13.31□□□□□ -0.28
HDAC6-204ENST00000376643 PRR5P85299 388 aa13.31□□□□□ -0.28
HDAC6-204ENST00000376643 STX5Q13190 355 aa13.31□□□□□ -0.28
HDAC6-204ENST00000376643 SLC29A2Q14542 456 aa13.31□□□□□ -0.28
HDAC6-204ENST00000376643 POU4F3Q15319 338 aa13.31□□□□□ -0.28
HDAC6-204ENST00000376643 PDSS1Q5T2R2 415 aa13.31□□□□□ -0.28
HDAC6-204ENST00000376643 EIF1ADQ8N9N8 165 aaKnown RBP13.31□□□□□ -0.28
HDAC6-204ENST00000376643 CDRT4Q8N9R6 151 aa13.31□□□□□ -0.28
HDAC6-204ENST00000376643 OR4N2Q8NGD1 307 aa13.31□□□□□ -0.28
HDAC6-204ENST00000376643 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.31□□□□□ -0.28
HDAC6-204ENST00000376643 STARD4Q96DR4 205 aa13.31□□□□□ -0.28
HDAC6-204ENST00000376643 KCNA7Q96RP8 456 aa13.31□□□□□ -0.28
HDAC6-204ENST00000376643 CCT7Q99832 543 aa13.31□□□□□ -0.28
HDAC6-204ENST00000376643 TRMOQ9BU70 441 aa13.31□□□□□ -0.28
HDAC6-204ENST00000376643 PRRG4Q9BZD6 226 aa13.31□□□□□ -0.28
HDAC6-204ENST00000376643 GLRX2Q9NS18 164 aa13.31□□□□□ -0.28
HDAC6-204ENST00000376643 C1orf109Q9NX04 203 aa13.31□□□□□ -0.28
HDAC6-204ENST00000376643 MED11Q9P086 117 aa13.31□□□□□ -0.28
HDAC6-204ENST00000376643 MCTS1Q9ULC4 181 aaKnown RBP13.31□□□□□ -0.28
HDAC6-204ENST00000376643 TMED5Q9Y3A6 229 aa13.31□□□□□ -0.28
HDAC6-204ENST00000376643 POLR3HQ9Y535 204 aaPredicted RBP13.31□□□□□ -0.28
HDAC6-204ENST00000376643 MPDZO75970 2070 aa13.31□□□□□ -0.28
HDAC6-204ENST00000376643 OR2M5A3KFT3 312 aa13.3□□□□□ -0.28
HDAC6-204ENST00000376643 H3BML4 177 aa13.3□□□□□ -0.28
HDAC6-204ENST00000376643 PDPK1O15530 556 aa13.3□□□□□ -0.28
HDAC6-204ENST00000376643 SEC14L5O43304 696 aa13.3□□□□□ -0.28
HDAC6-204ENST00000376643 TMCC2O75069 709 aa13.3□□□□□ -0.28
HDAC6-204ENST00000376643 SEC22BO75396 215 aa13.3□□□□□ -0.28
HDAC6-204ENST00000376643 SOX30O94993 753 aa13.3□□□□□ -0.28
HDAC6-204ENST00000376643 UTS2O95399 124 aa13.3□□□□□ -0.28
HDAC6-204ENST00000376643 PLGP00747 810 aaPredicted RBP13.3□□□□□ -0.28
HDAC6-204ENST00000376643 NGFRP08138 427 aa13.3□□□□□ -0.28
HDAC6-204ENST00000376643 TCEA1P23193 301 aaKnown RBP13.3□□□□□ -0.28
HDAC6-204ENST00000376643 ME2P23368 584 aa13.3□□□□□ -0.28
HDAC6-204ENST00000376643 UGT2B10P36537 528 aa13.3□□□□□ -0.28
HDAC6-204ENST00000376643 RPL3P39023 403 aaKnown RBP13.3□□□□□ -0.28
HDAC6-204ENST00000376643 RFX3P48380 749 aa13.3□□□□□ -0.28
HDAC6-204ENST00000376643 PON3Q15166 354 aa13.3□□□□□ -0.28
HDAC6-204ENST00000376643 GTF2IRD2BQ6EKJ0 949 aa13.3□□□□□ -0.28
HDAC6-204ENST00000376643 ZCCHC12Q6PEW1 402 aa13.3□□□□□ -0.28
HDAC6-204ENST00000376643 RNF165Q6ZSG1 346 aa13.3□□□□□ -0.28
HDAC6-204ENST00000376643 R3HCC1LQ7Z5L2 792 aaKnown RBP13.3□□□□□ -0.28
HDAC6-204ENST00000376643 GTF2IRD2Q86UP8 949 aa13.3□□□□□ -0.28
HDAC6-204ENST00000376643 WDR75Q8IWA0 830 aaKnown RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms