RNA–Protein interactions for RNA: ENST00000376492.3

CLCN6-205, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 1,062 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-205ENST00000376492 ZCCHC23Q6ZST2 131 aa11.91□□□□□ -0.5
CLCN6-205ENST00000376492 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.91□□□□□ -0.5
CLCN6-205ENST00000376492 NANOS1Q8WY41 292 aaKnown RBP11.91□□□□□ -0.5
CLCN6-205ENST00000376492 PIGTQ969N2 578 aa11.91□□□□□ -0.5
CLCN6-205ENST00000376492 NTNG2Q96CW9 530 aa11.91□□□□□ -0.5
CLCN6-205ENST00000376492 ZNF681Q96N22 645 aa11.91□□□□□ -0.5
CLCN6-205ENST00000376492 CCL19Q99731 98 aa11.91□□□□□ -0.5
CLCN6-205ENST00000376492 CCT7Q99832 543 aa11.91□□□□□ -0.5
CLCN6-205ENST00000376492 PIGQQ9BRB3 760 aa11.91□□□□□ -0.5
CLCN6-205ENST00000376492 BDH2Q9BUT1 245 aa11.91□□□□□ -0.5
CLCN6-205ENST00000376492 TUBB1Q9H4B7 451 aa11.91□□□□□ -0.5
CLCN6-205ENST00000376492 UBTD1Q9HAC8 227 aa11.91□□□□□ -0.5
CLCN6-205ENST00000376492 KLHL28Q9NXS3 571 aa11.91□□□□□ -0.5
CLCN6-205ENST00000376492 HEY2Q9UBP5 337 aa11.91□□□□□ -0.5
CLCN6-205ENST00000376492 NINQ8N4C6 2090 aa11.91□□□□□ -0.5
CLCN6-205ENST00000376492 ANK3Q12955 4377 aaKnown RBP11.91□□□□□ -0.5
CLCN6-205ENST00000376492 MED12Q93074 2177 aa11.91□□□□□ -0.5
CLCN6-205ENST00000376492 A8MXE2 369 aa11.9□□□□□ -0.5
CLCN6-205ENST00000376492 SNPHO15079 494 aa11.9□□□□□ -0.5
CLCN6-205ENST00000376492 RGS14O43566 566 aa11.9□□□□□ -0.5
CLCN6-205ENST00000376492 RCBTB2O95199 551 aa11.9□□□□□ -0.5
CLCN6-205ENST00000376492 ACTL6AO96019 429 aa11.9□□□□□ -0.5
CLCN6-205ENST00000376492 ATP1B1P05026 303 aa11.9□□□□□ -0.5
CLCN6-205ENST00000376492 IL3P08700 152 aa11.9□□□□□ -0.5
CLCN6-205ENST00000376492 BGNP21810 368 aa11.9□□□□□ -0.5
CLCN6-205ENST00000376492 SLC1A6P48664 564 aa11.9□□□□□ -0.5
CLCN6-205ENST00000376492 TMED10P49755 219 aaKnown RBP11.9□□□□□ -0.5
CLCN6-205ENST00000376492 ABCE1P61221 599 aaKnown RBP11.9□□□□□ -0.5
CLCN6-205ENST00000376492 FAM27E3Q08E93 113 aa11.9□□□□□ -0.5
CLCN6-205ENST00000376492 ZNF763Q0D2J5 394 aa11.9□□□□□ -0.5
CLCN6-205ENST00000376492 BST1Q10588 318 aa11.9□□□□□ -0.5
CLCN6-205ENST00000376492 MAP4K2Q12851 820 aa11.9□□□□□ -0.5
CLCN6-205ENST00000376492 NNATQ16517 81 aa11.9□□□□□ -0.5
CLCN6-205ENST00000376492 HLA-DQA1Q5Y7H0 255 aa11.9□□□□□ -0.5
CLCN6-205ENST00000376492 NOXRED1Q6NXP6 359 aa11.9□□□□□ -0.5
CLCN6-205ENST00000376492 PIGWQ7Z7B1 504 aa11.9□□□□□ -0.5
CLCN6-205ENST00000376492 CPLX4Q7Z7G2 160 aa11.9□□□□□ -0.5
CLCN6-205ENST00000376492 ADGRE4PQ86SQ3 457 aa11.9□□□□□ -0.5
CLCN6-205ENST00000376492 GALNT12Q8IXK2 581 aa11.9□□□□□ -0.5
CLCN6-205ENST00000376492 ANKS4BQ8N8V4 417 aa11.9□□□□□ -0.5
CLCN6-205ENST00000376492 PIWIL2Q8TC59 973 aaKnown RBP11.9□□□□□ -0.5
CLCN6-205ENST00000376492 ADIPOR1Q96A54 375 aa11.9□□□□□ -0.5
CLCN6-205ENST00000376492 TP53INP1Q96A56 240 aa11.9□□□□□ -0.5
CLCN6-205ENST00000376492 CCT8L2Q96SF2 557 aa11.9□□□□□ -0.5
CLCN6-205ENST00000376492 SECISBP2Q96T21 854 aaKnown RBP11.9□□□□□ -0.5
CLCN6-205ENST00000376492 TM9SF2Q99805 663 aa11.9□□□□□ -0.5
CLCN6-205ENST00000376492 METTL7AQ9H8H3 244 aa11.9□□□□□ -0.5
CLCN6-205ENST00000376492 GALNT9Q9HCQ5 603 aa11.9□□□□□ -0.5
CLCN6-205ENST00000376492 SERHLQ9NQF3 203 aa11.9□□□□□ -0.5
CLCN6-205ENST00000376492 MRGBPQ9NV56 204 aa11.9□□□□□ -0.5
CLCN6-205ENST00000376492 C1orf109Q9NX04 203 aa11.9□□□□□ -0.5
CLCN6-205ENST00000376492 EHD3Q9NZN3 535 aa11.9□□□□□ -0.5
CLCN6-205ENST00000376492 CLCF1Q9UBD9 225 aa11.9□□□□□ -0.5
CLCN6-205ENST00000376492 PACSIN3Q9UKS6 424 aa11.9□□□□□ -0.5
CLCN6-205ENST00000376492 MAPRE3Q9UPY8 281 aa11.9□□□□□ -0.5
CLCN6-205ENST00000376492 DTX4Q9Y2E6 619 aa11.9□□□□□ -0.5
CLCN6-205ENST00000376492 RAP2CQ9Y3L5 183 aa11.9□□□□□ -0.5
CLCN6-205ENST00000376492 ZNF780BQ9Y6R6 833 aa11.9□□□□□ -0.5
CLCN6-205ENST00000376492 FREM3P0C091 2139 aa11.9□□□□□ -0.5
CLCN6-205ENST00000376492 DOCK7Q96N67 2140 aa11.9□□□□□ -0.5
CLCN6-205ENST00000376492 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.89□□□□□ -0.51
CLCN6-205ENST00000376492 SEC22BO75396 215 aa11.89□□□□□ -0.51
CLCN6-205ENST00000376492 ERAL1O75616 437 aaKnown RBP11.89□□□□□ -0.51
CLCN6-205ENST00000376492 TNFSF13O75888 250 aa11.89□□□□□ -0.51
CLCN6-205ENST00000376492 VIMP08670 466 aaKnown RBP11.89□□□□□ -0.51
CLCN6-205ENST00000376492 LINC00032P0C843 101 aa11.89□□□□□ -0.51
CLCN6-205ENST00000376492 TROVE2P10155 538 aaKnown RBP eCLIP11.89□□□□□ -0.51
CLCN6-205ENST00000376492 CPN1P15169 458 aa11.89□□□□□ -0.51
CLCN6-205ENST00000376492 DDCP20711 480 aa11.89□□□□□ -0.51
CLCN6-205ENST00000376492 S1PR1P21453 382 aa11.89□□□□□ -0.51
CLCN6-205ENST00000376492 DRD4P21917 467 aa11.89□□□□□ -0.51
CLCN6-205ENST00000376492 ABCD3P28288 659 aa11.89□□□□□ -0.51
CLCN6-205ENST00000376492 FEN1P39748 380 aaKnown RBP11.89□□□□□ -0.51
CLCN6-205ENST00000376492 ALDH9A1P49189 494 aa11.89□□□□□ -0.51
CLCN6-205ENST00000376492 NRG3P56975 720 aa11.89□□□□□ -0.51
CLCN6-205ENST00000376492 MGAT2Q10469 447 aa11.89□□□□□ -0.51
CLCN6-205ENST00000376492 ACKR1Q16570 336 aa11.89□□□□□ -0.51
CLCN6-205ENST00000376492 PRICKLE4Q2TBC4 344 aa11.89□□□□□ -0.51
CLCN6-205ENST00000376492 SH2D4BQ5SQS7 431 aa11.89□□□□□ -0.51
CLCN6-205ENST00000376492 GKAP1Q5VSY0 366 aaPredicted RBP11.89□□□□□ -0.51
CLCN6-205ENST00000376492 FAM71E1Q6IPT2 247 aa11.89□□□□□ -0.51
CLCN6-205ENST00000376492 PRSS57Q6UWY2 283 aa11.89□□□□□ -0.51
CLCN6-205ENST00000376492 WDR75Q8IWA0 830 aaKnown RBP11.89□□□□□ -0.51
CLCN6-205ENST00000376492 LRRC34Q8IZ02 419 aa11.89□□□□□ -0.51
CLCN6-205ENST00000376492 SAMD14Q8IZD0 417 aaPredicted RBP11.89□□□□□ -0.51
CLCN6-205ENST00000376492 ZNF615Q8N8J6 731 aa11.89□□□□□ -0.51
CLCN6-205ENST00000376492 OR7G1Q8NGA0 311 aa11.89□□□□□ -0.51
CLCN6-205ENST00000376492 OR1J4Q8NGS1 313 aa11.89□□□□□ -0.51
CLCN6-205ENST00000376492 OR2T11Q8NH01 316 aa11.89□□□□□ -0.51
CLCN6-205ENST00000376492 TWIST2Q8WVJ9 160 aa11.89□□□□□ -0.51
CLCN6-205ENST00000376492 CTHRC1Q96CG8 243 aa11.89□□□□□ -0.51
CLCN6-205ENST00000376492 KLHL29Q96CT2 875 aa11.89□□□□□ -0.51
CLCN6-205ENST00000376492 CNRIP1Q96F85 164 aaPredicted RBP11.89□□□□□ -0.51
CLCN6-205ENST00000376492 PIK3IP1Q96FE7 263 aa11.89□□□□□ -0.51
CLCN6-205ENST00000376492 FCRL1Q96LA6 429 aa11.89□□□□□ -0.51
CLCN6-205ENST00000376492 ZFP3Q96NJ6 502 aa11.89□□□□□ -0.51
CLCN6-205ENST00000376492 WFIKKN1Q96NZ8 548 aa11.89□□□□□ -0.51
CLCN6-205ENST00000376492 HS3ST6Q96QI5 342 aa11.89□□□□□ -0.51
CLCN6-205ENST00000376492 NODALQ96S42 347 aa11.89□□□□□ -0.51
CLCN6-205ENST00000376492 EBPLQ9BY08 206 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms