RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 GLCCI1Q86VQ1 547 aa13.08□□□□□ -0.31
MSH5-202ENST00000375740 ZCCHC10Q8TBK6 192 aa13.08□□□□□ -0.31
MSH5-202ENST00000375740 ZG16BQ96DA0 208 aa13.08□□□□□ -0.31
MSH5-202ENST00000375740 OMA1Q96E52 524 aa13.08□□□□□ -0.31
MSH5-202ENST00000375740 C10orf90Q96M02 699 aa13.08□□□□□ -0.31
MSH5-202ENST00000375740 C8orf33Q9H7E9 229 aaPredicted RBP13.08□□□□□ -0.31
MSH5-202ENST00000375740 CTPS2Q9NRF8 586 aa13.08□□□□□ -0.31
MSH5-202ENST00000375740 A0A1W2PRQ8 180 aa13.08□□□□□ -0.32
MSH5-202ENST00000375740 SH3D21A4FU49 640 aa13.08□□□□□ -0.32
MSH5-202ENST00000375740 LEUTXA8MZ59 168 aa13.08□□□□□ -0.32
MSH5-202ENST00000375740 B8ZZF3 427 aa13.08□□□□□ -0.32
MSH5-202ENST00000375740 H3BN98 237 aa13.08□□□□□ -0.32
MSH5-202ENST00000375740 P2RX6O15547 441 aa13.08□□□□□ -0.32
MSH5-202ENST00000375740 TNFSF14O43557 240 aa13.08□□□□□ -0.32
MSH5-202ENST00000375740 SLC35G6P0C7Q6 338 aa13.08□□□□□ -0.32
MSH5-202ENST00000375740 CPN2P22792 545 aa13.08□□□□□ -0.32
MSH5-202ENST00000375740 AKT2P31751 481 aa13.08□□□□□ -0.32
MSH5-202ENST00000375740 MAN2A2P49641 1150 aa13.08□□□□□ -0.32
MSH5-202ENST00000375740 RUNX2Q13950 521 aa13.08□□□□□ -0.32
MSH5-202ENST00000375740 DEFB134Q4QY38 66 aa13.08□□□□□ -0.32
MSH5-202ENST00000375740 C6orf132Q5T0Z8 1188 aa13.08□□□□□ -0.32
MSH5-202ENST00000375740 FIGLAQ6QHK4 219 aa13.08□□□□□ -0.32
MSH5-202ENST00000375740 FAM92BQ6ZTR7 304 aa13.08□□□□□ -0.32
MSH5-202ENST00000375740 WDR53Q7Z5U6 358 aaPredicted RBP13.08□□□□□ -0.32
MSH5-202ENST00000375740 ESX1Q8N693 406 aa13.08□□□□□ -0.32
MSH5-202ENST00000375740 PATE1Q8WXA2 126 aa13.08□□□□□ -0.32
MSH5-202ENST00000375740 PRR14Q9BWN1 585 aa13.08□□□□□ -0.32
MSH5-202ENST00000375740 GON7Q9BXV9 100 aa13.08□□□□□ -0.32
MSH5-202ENST00000375740 ACTR10Q9NZ32 417 aa13.08□□□□□ -0.32
MSH5-202ENST00000375740 KCMF1Q9P0J7 381 aa13.08□□□□□ -0.32
MSH5-202ENST00000375740 GPX5O75715 221 aa13.07□□□□□ -0.32
MSH5-202ENST00000375740 CCNYL3P0C7X3 344 aa13.07□□□□□ -0.32
MSH5-202ENST00000375740 SMIM10L1P0DMW3 83 aa13.07□□□□□ -0.32
MSH5-202ENST00000375740 SOX6P35712 828 aa13.07□□□□□ -0.32
MSH5-202ENST00000375740 RPS19P39019 145 aaKnown RBP13.07□□□□□ -0.32
MSH5-202ENST00000375740 XKP51811 444 aa13.07□□□□□ -0.32
MSH5-202ENST00000375740 YPEL5P62699 121 aa13.07□□□□□ -0.32
MSH5-202ENST00000375740 LSM11P83369 360 aaKnown RBP eCLIP13.07□□□□□ -0.32
MSH5-202ENST00000375740 OR4N5Q8IXE1 308 aa13.07□□□□□ -0.32
MSH5-202ENST00000375740 SLC44A3Q8N4M1 653 aa13.07□□□□□ -0.32
MSH5-202ENST00000375740 FRMD1Q8N878 549 aa13.07□□□□□ -0.32
MSH5-202ENST00000375740 FLCNQ8NFG4 579 aa13.07□□□□□ -0.32
MSH5-202ENST00000375740 ZFAND1Q8TCF1 268 aa13.07□□□□□ -0.32
MSH5-202ENST00000375740 HMGB4Q8WW32 186 aa13.07□□□□□ -0.32
MSH5-202ENST00000375740 KLHL6Q8WZ60 621 aa13.07□□□□□ -0.32
MSH5-202ENST00000375740 COL26A1Q96A83 441 aa13.07□□□□□ -0.32
MSH5-202ENST00000375740 SMIM10Q96HG1 83 aa13.07□□□□□ -0.32
MSH5-202ENST00000375740 PINK1Q9BXM7 581 aa13.07□□□□□ -0.32
MSH5-202ENST00000375740 HDHD5Q9BXW7 423 aa13.07□□□□□ -0.32
MSH5-202ENST00000375740 MAN2C1Q9NTJ4 1040 aa13.07□□□□□ -0.32
MSH5-202ENST00000375740 COL4A2P08572 1712 aa13.07□□□□□ -0.32
MSH5-202ENST00000375740 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.07□□□□□ -0.32
MSH5-202ENST00000375740 LOC105369274A0A096LPK9 316 aa13.07□□□□□ -0.32
MSH5-202ENST00000375740 LOC102723532A0A0G2JNH3 316 aa13.07□□□□□ -0.32
MSH5-202ENST00000375740 ENTPD6O75354 484 aa13.07□□□□□ -0.32
MSH5-202ENST00000375740 M6PRP20645 277 aa13.07□□□□□ -0.32
MSH5-202ENST00000375740 TSTQ16762 297 aaKnown RBP13.07□□□□□ -0.32
MSH5-202ENST00000375740 ZNF311Q5JNZ3 666 aa13.07□□□□□ -0.32
MSH5-202ENST00000375740 SFTPA2Q8IWL1 248 aa13.07□□□□□ -0.32
MSH5-202ENST00000375740 OR4N4Q8N0Y3 316 aa13.07□□□□□ -0.32
MSH5-202ENST00000375740 OR13H1Q8NG92 308 aa13.07□□□□□ -0.32
MSH5-202ENST00000375740 GIMAP5Q96F15 307 aa13.07□□□□□ -0.32
MSH5-202ENST00000375740 TWSG1Q9GZX9 223 aa13.07□□□□□ -0.32
MSH5-202ENST00000375740 C11orf54Q9H0W9 315 aaPredicted RBP13.07□□□□□ -0.32
MSH5-202ENST00000375740 SLC38A1Q9H2H9 487 aa13.07□□□□□ -0.32
MSH5-202ENST00000375740 SMURF1Q9HCE7 757 aa13.07□□□□□ -0.32
MSH5-202ENST00000375740 TEKT2Q9UIF3 430 aa13.07□□□□□ -0.32
MSH5-202ENST00000375740 TRAPPC4Q9Y296 219 aa13.07□□□□□ -0.32
MSH5-202ENST00000375740 ARHGEF17Q96PE2 2063 aaPredicted RBP13.07□□□□□ -0.32
MSH5-202ENST00000375740 EFCAB10A6NFE3 127 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 B4DXG7 233 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 SEMA4FO95754 770 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 TP53P04637 393 aaPredicted RBP13.06□□□□□ -0.32
MSH5-202ENST00000375740 TNNI3P19429 210 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 SIM1P81133 766 aaPredicted RBP13.06□□□□□ -0.32
MSH5-202ENST00000375740 TNFRSF17Q02223 184 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 SUZ12Q15022 739 aaKnown RBP13.06□□□□□ -0.32
MSH5-202ENST00000375740 IDO2Q6ZQW0 420 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 ABI3BPQ7Z7G0 1075 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 ZER1Q7Z7L7 766 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 VRK2Q86Y07 508 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 CACTIN-AS1Q8N1I8 211 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 SMRP1Q8NCR6 262 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 OR7G2Q8NG99 324 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 OR4K5Q8NGD3 323 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 TTC9Q92623 222 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 SLC35A4Q96G79 324 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 SERINC2Q96SA4 455 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 CNPPD1Q9BV87 410 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 ACTRT3Q9BYD9 372 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 TCEAL2Q9H3H9 227 aaPredicted RBP13.06□□□□□ -0.32
MSH5-202ENST00000375740 TMEM74BQ9NUR3 256 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 PILRAQ9UKJ1 303 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 HS3ST3A1Q9Y663 406 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 CASC3O15234 703 aaKnown RBP13.06□□□□□ -0.32
MSH5-202ENST00000375740 MMP11P24347 488 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 MYL9P24844 172 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 SNRPGP62308 76 aaKnown RBP13.06□□□□□ -0.32
MSH5-202ENST00000375740 OLR1P78380 273 aa13.06□□□□□ -0.32
MSH5-202ENST00000375740 ILF3Q12906 894 aaKnown RBP eCLIP13.06□□□□□ -0.328e-7■■□□□ 11.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms