RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 CHTF18Q8WVB6 975 aa16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 WDR77Q9BQA1 342 aaPredicted RBP16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 PRR14Q9BWN1 585 aa16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 KIR3DX1Q9H7L2 352 aa16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 CD93Q9NPY3 652 aa16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 TMEM9Q9P0T7 183 aa16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 SRPX2O60687 465 aaPredicted RBP16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 FAUP35544 74 aaKnown RBP16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 NCS1P62166 190 aa16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 TRA2BP62995 288 aaKnown RBP16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 HNRNPA0Q13151 305 aaKnown RBP16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 TUBA3CQ13748 450 aa16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 SGCAQ16586 387 aa16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 LRFN4Q6PJG9 635 aa16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 ZNF101Q8IZC7 436 aa16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 ZNF597Q96LX8 424 aa16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 COMMD9Q9P000 198 aa16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 WDR37Q9Y2I8 494 aa16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 COL11A1P12107 1806 aaPredicted RBP16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 FAM183AA6NL82 134 aa16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 MCCD1P59942 119 aaPredicted RBP16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 RACK1P63244 317 aaKnown RBP16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 ZNF627Q7L945 461 aa16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 GID4Q8IVV7 300 aa16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 OR51Q1Q8NH59 317 aa16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 ORAI3Q9BRQ5 295 aa16.88■□□□□ 0.29
PTPDC1-202ENST00000375360 PPP1R3DO95685 299 aa16.87■□□□□ 0.29
PTPDC1-202ENST00000375360 REEP5Q00765 189 aa16.87■□□□□ 0.29
PTPDC1-202ENST00000375360 ANKDD1AQ495B1 522 aa16.87■□□□□ 0.29
PTPDC1-202ENST00000375360 CCDC92Q53HC0 331 aaPredicted RBP16.87■□□□□ 0.29
PTPDC1-202ENST00000375360 NEIL3Q8TAT5 605 aa16.87■□□□□ 0.29
PTPDC1-202ENST00000375360 EXOSC1Q9Y3B2 195 aaKnown RBP16.87■□□□□ 0.29
PTPDC1-202ENST00000375360 FMO6PO60774 539 aa16.87■□□□□ 0.29
PTPDC1-202ENST00000375360 WBP4O75554 376 aaKnown RBP16.87■□□□□ 0.29
PTPDC1-202ENST00000375360 CD160O95971 181 aa16.87■□□□□ 0.29
PTPDC1-202ENST00000375360 AGBL4Q5VU57 503 aa16.87■□□□□ 0.29
PTPDC1-202ENST00000375360 ZNF619Q8N2I2 560 aa16.87■□□□□ 0.29
PTPDC1-202ENST00000375360 C1QTNF2Q9BXJ5 285 aa16.87■□□□□ 0.29
PTPDC1-202ENST00000375360 A8MVJ9 347 aa16.87■□□□□ 0.29
PTPDC1-202ENST00000375360 PSKH1P11801 424 aa16.87■□□□□ 0.29
PTPDC1-202ENST00000375360 SLC6A12P48065 614 aa16.87■□□□□ 0.29
PTPDC1-202ENST00000375360 TRIM61Q5EBN2 209 aa16.87■□□□□ 0.29
PTPDC1-202ENST00000375360 PODNL1Q6PEZ8 512 aa16.87■□□□□ 0.29
PTPDC1-202ENST00000375360 TMEM239Q8WW34 195 aa16.87■□□□□ 0.29
PTPDC1-202ENST00000375360 ZNF559Q9BR84 538 aa16.87■□□□□ 0.29
PTPDC1-202ENST00000375360 SEC14L4Q9UDX3 406 aa16.87■□□□□ 0.29
PTPDC1-202ENST00000375360 UNC13CQ8NB66 2214 aa16.87■□□□□ 0.29
PTPDC1-202ENST00000375360 ZNFX1Q9P2E3 1918 aaKnown RBP16.87■□□□□ 0.29
PTPDC1-202ENST00000375360 VSTM2BA6NLU5 285 aa16.86■□□□□ 0.29
PTPDC1-202ENST00000375360 CD27P26842 260 aa16.86■□□□□ 0.29
PTPDC1-202ENST00000375360 ZP2Q05996 745 aa16.86■□□□□ 0.29
PTPDC1-202ENST00000375360 FRMPD2BQ6IN97 320 aa16.86■□□□□ 0.29
PTPDC1-202ENST00000375360 SLC22A8Q8TCC7 542 aa16.86■□□□□ 0.29
PTPDC1-202ENST00000375360 TAMM41Q96BW9 452 aa16.86■□□□□ 0.29
PTPDC1-202ENST00000375360 ST14Q9Y5Y6 855 aa16.86■□□□□ 0.29
PTPDC1-202ENST00000375360 FAM172BPA6NC97 362 aa16.86■□□□□ 0.29
PTPDC1-202ENST00000375360 LCMT2O60294 686 aaKnown RBP16.86■□□□□ 0.29
PTPDC1-202ENST00000375360 IL33O95760 270 aa16.86■□□□□ 0.29
PTPDC1-202ENST00000375360 SLC2A2P11168 524 aaPredicted RBP16.86■□□□□ 0.29
PTPDC1-202ENST00000375360 GDI2P50395 445 aaKnown RBP16.86■□□□□ 0.29
PTPDC1-202ENST00000375360 PER3P56645 1201 aa16.86■□□□□ 0.29
PTPDC1-202ENST00000375360 BICRALQ6AI39 1079 aa16.86■□□□□ 0.29
PTPDC1-202ENST00000375360 PPP1R3BQ86XI6 285 aa16.86■□□□□ 0.29
PTPDC1-202ENST00000375360 PSD4Q8NDX1 1056 aa16.86■□□□□ 0.29
PTPDC1-202ENST00000375360 TOR1AIP2Q8NFQ8 470 aa16.86■□□□□ 0.29
PTPDC1-202ENST00000375360 PINK1Q9BXM7 581 aa16.86■□□□□ 0.29
PTPDC1-202ENST00000375360 PCDHGB5Q9Y5G0 923 aa16.86■□□□□ 0.29
PTPDC1-202ENST00000375360 WASHC1A8K0Z3 465 aa16.86■□□□□ 0.29
PTPDC1-202ENST00000375360 ACPPP15309 386 aa16.86■□□□□ 0.29
PTPDC1-202ENST00000375360 YBX1P67809 324 aaKnown RBP16.86■□□□□ 0.29
PTPDC1-202ENST00000375360 WASH2PQ6VEQ5 465 aa16.86■□□□□ 0.29
PTPDC1-202ENST00000375360 AKAP14Q86UN6 197 aa16.86■□□□□ 0.29
PTPDC1-202ENST00000375360 SLC16A11Q8NCK7 471 aa16.86■□□□□ 0.29
PTPDC1-202ENST00000375360 GAREM1Q9H706 876 aa16.86■□□□□ 0.29
PTPDC1-202ENST00000375360 PAK1IP1Q9NWT1 392 aaPredicted RBP16.86■□□□□ 0.29
PTPDC1-202ENST00000375360 PADI2Q9Y2J8 665 aa16.86■□□□□ 0.29
PTPDC1-202ENST00000375360 CD8B2A6NJW9 211 aa16.86■□□□□ 0.29
PTPDC1-202ENST00000375360 ZNF879B4DU55 563 aa16.86■□□□□ 0.29
PTPDC1-202ENST00000375360 PDCD5O14737 125 aa16.86■□□□□ 0.29
PTPDC1-202ENST00000375360 CD8BP10966 210 aa16.86■□□□□ 0.29
PTPDC1-202ENST00000375360 FUT1P19526 365 aa16.86■□□□□ 0.29
PTPDC1-202ENST00000375360 OR1D5P58170 312 aa16.86■□□□□ 0.29
PTPDC1-202ENST00000375360 KCNJ10P78508 379 aa16.86■□□□□ 0.29
PTPDC1-202ENST00000375360 TSSK4Q6SA08 328 aa16.86■□□□□ 0.29
PTPDC1-202ENST00000375360 ARL14Q8N4G2 192 aa16.86■□□□□ 0.29
PTPDC1-202ENST00000375360 TCTN2Q96GX1 697 aa16.86■□□□□ 0.29
PTPDC1-202ENST00000375360 HIST1H2AAQ96QV6 131 aa16.86■□□□□ 0.29
PTPDC1-202ENST00000375360 LHPPQ9H008 270 aa16.86■□□□□ 0.29
PTPDC1-202ENST00000375360 RBMX2Q9Y388 322 aaKnown RBP16.86■□□□□ 0.29
PTPDC1-202ENST00000375360 LRIT2A6NDA9 550 aa16.85■□□□□ 0.29
PTPDC1-202ENST00000375360 JRKO75564 520 aa16.85■□□□□ 0.29
PTPDC1-202ENST00000375360 ETHE1O95571 254 aa16.85■□□□□ 0.29
PTPDC1-202ENST00000375360 GYPBP06028 91 aa16.85■□□□□ 0.29
PTPDC1-202ENST00000375360 PKLRP30613 574 aa16.85■□□□□ 0.29
PTPDC1-202ENST00000375360 NKX3-2P78367 333 aa16.85■□□□□ 0.29
PTPDC1-202ENST00000375360 APOFQ13790 326 aa16.85■□□□□ 0.29
PTPDC1-202ENST00000375360 ARFRP1Q13795 201 aa16.85■□□□□ 0.29
PTPDC1-202ENST00000375360 TNFAIP8L1Q8WVP5 186 aa16.85■□□□□ 0.29
PTPDC1-202ENST00000375360 GATA6Q92908 595 aa16.85■□□□□ 0.29
PTPDC1-202ENST00000375360 NAT6Q93015 286 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms