RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 CACNG6Q9BXT2 260 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 EVA1AQ9H8M9 152 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 TPT1P8Q9HAU6 139 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 DNAJC11Q9NVH1 559 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 GPN3Q9UHW5 284 aaPredicted RBP11.42□□□□□ -0.58
C9orf3-203ENST00000375315 FZD4Q9ULV1 537 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 CORO2BQ9UQ03 480 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 TRDV1A0A1B0GX56 115 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 EEF1E1O43324 174 aaKnown RBP11.42□□□□□ -0.58
C9orf3-203ENST00000375315 SOD1P00441 154 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 ASGR2P07307 311 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 EBLN1P0CF75 366 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 UGT2B7P16662 529 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 RAB3BP20337 219 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 PTSQ03393 145 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 BOP1Q14137 746 aaKnown RBP11.42□□□□□ -0.58
C9orf3-203ENST00000375315 FGL2Q14314 439 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 ZNF234Q14588 700 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 HEPACAMQ14CZ8 416 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 ZSWIM7Q19AV6 140 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 TMEM31Q5JXX7 168 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 BEST4Q8NFU0 473 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 LKAAEAR1Q8TD35 194 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 MRPS24Q96EL2 167 aaKnown RBP11.42□□□□□ -0.58
C9orf3-203ENST00000375315 LMLNQ96KR4 655 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 PIP5K1AQ99755 562 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 ACTR6Q9GZN1 396 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 ZNF768Q9H5H4 540 aaKnown RBP11.42□□□□□ -0.58
C9orf3-203ENST00000375315 IMP3Q9NV31 184 aaKnown RBP11.42□□□□□ -0.58
C9orf3-203ENST00000375315 CLEC1BQ9P126 229 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 GPR160Q9UJ42 338 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 CLCA2Q9UQC9 943 aa11.42□□□□□ -0.58
C9orf3-203ENST00000375315 SF3B6Q9Y3B4 125 aaKnown RBP11.42□□□□□ -0.58
C9orf3-203ENST00000375315 SDC3O75056 442 aa11.41□□□□□ -0.58
C9orf3-203ENST00000375315 RP2O75695 350 aa11.41□□□□□ -0.58
C9orf3-203ENST00000375315 NCR1O76036 304 aa11.41□□□□□ -0.58
C9orf3-203ENST00000375315 SLC25A14O95258 325 aaPredicted RBP11.41□□□□□ -0.58
C9orf3-203ENST00000375315 OPN1SWP03999 348 aa11.41□□□□□ -0.58
C9orf3-203ENST00000375315 S100A9P06702 114 aaKnown RBP11.41□□□□□ -0.58
C9orf3-203ENST00000375315 PPIBP23284 216 aaKnown RBP11.41□□□□□ -0.58
C9orf3-203ENST00000375315 SRSF11Q05519 484 aaKnown RBP11.41□□□□□ -0.58
C9orf3-203ENST00000375315 IER5LQ5T953 404 aa11.41□□□□□ -0.58
C9orf3-203ENST00000375315 HSD11B1LQ7Z5J1 315 aa11.41□□□□□ -0.58
C9orf3-203ENST00000375315 CAMKVQ8NCB2 501 aa11.41□□□□□ -0.58
C9orf3-203ENST00000375315 OR6S1Q8NH40 331 aa11.41□□□□□ -0.58
C9orf3-203ENST00000375315 MRGPRX3Q96LB0 322 aa11.41□□□□□ -0.58
C9orf3-203ENST00000375315 UBL7Q96S82 380 aaPredicted RBP11.41□□□□□ -0.58
C9orf3-203ENST00000375315 ISYNA1Q9NPH2 558 aa11.41□□□□□ -0.58
C9orf3-203ENST00000375315 THSD1Q9NS62 852 aa11.41□□□□□ -0.58
C9orf3-203ENST00000375315 WWOXQ9NZC7 414 aa11.41□□□□□ -0.58
C9orf3-203ENST00000375315 ERVK-19Q9WJR5 959 aa11.41□□□□□ -0.58
C9orf3-203ENST00000375315 PCDHB11Q9Y5F2 797 aa11.41□□□□□ -0.58
C9orf3-203ENST00000375315 SPEGQ15772 3267 aa11.41□□□□□ -0.58
C9orf3-203ENST00000375315 SLC28A2O43868 658 aa11.41□□□□□ -0.58
C9orf3-203ENST00000375315 GASTP01350 101 aa11.41□□□□□ -0.58
C9orf3-203ENST00000375315 NUDT7P0C024 238 aa11.41□□□□□ -0.58
C9orf3-203ENST00000375315 CISD3P0C7P0 127 aa11.41□□□□□ -0.58
C9orf3-203ENST00000375315 SDC1P18827 310 aa11.41□□□□□ -0.58
C9orf3-203ENST00000375315 TACR1P25103 407 aa11.41□□□□□ -0.58
C9orf3-203ENST00000375315 GIFP27352 417 aa11.41□□□□□ -0.58
C9orf3-203ENST00000375315 ETV5P41161 510 aa11.41□□□□□ -0.58
C9orf3-203ENST00000375315 ERVK-25P63136 954 aa11.41□□□□□ -0.58
C9orf3-203ENST00000375315 COL9A2Q14055 689 aaPredicted RBP11.41□□□□□ -0.58
C9orf3-203ENST00000375315 B3GNTL1Q67FW5 361 aaPredicted RBP11.41□□□□□ -0.58
C9orf3-203ENST00000375315 LRRC28Q86X40 367 aaPredicted RBP11.41□□□□□ -0.58
C9orf3-203ENST00000375315 MARCH9Q86YJ5 346 aa11.41□□□□□ -0.58
C9orf3-203ENST00000375315 OR52I1Q8NGK6 324 aa11.41□□□□□ -0.58
C9orf3-203ENST00000375315 RPLP0P6Q8NHW5 317 aa11.41□□□□□ -0.58
C9orf3-203ENST00000375315 NEIL3Q8TAT5 605 aa11.41□□□□□ -0.58
C9orf3-203ENST00000375315 NANPQ8TBE9 248 aa11.41□□□□□ -0.58
C9orf3-203ENST00000375315 ZDHHC1Q8WTX9 485 aa11.41□□□□□ -0.58
C9orf3-203ENST00000375315 SUSD6Q92537 303 aa11.41□□□□□ -0.58
C9orf3-203ENST00000375315 C12orf66Q96MD2 445 aa11.41□□□□□ -0.58
C9orf3-203ENST00000375315 COPS8Q99627 209 aa11.41□□□□□ -0.58
C9orf3-203ENST00000375315 SARGQ9BW04 601 aa11.41□□□□□ -0.58
C9orf3-203ENST00000375315 ACPTQ9BZG2 426 aa11.41□□□□□ -0.58
C9orf3-203ENST00000375315 RSPH9Q9H1X1 276 aaPredicted RBP11.41□□□□□ -0.58
C9orf3-203ENST00000375315 IL36AQ9UHA7 158 aa11.41□□□□□ -0.58
C9orf3-203ENST00000375315 PRKAB1Q9Y478 270 aa11.41□□□□□ -0.58
C9orf3-203ENST00000375315 DENND4CQ5VZ89 1909 aa11.41□□□□□ -0.58
C9orf3-203ENST00000375315 ARRDC5A6NEK1 342 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 GABRR3A8MPY1 467 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 G3V3Q6 166 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 TEX46H3BTG2 121 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 LAMP2P13473 410 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 PRPS1L1P21108 318 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 CALCRP30988 508 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 ACSL1P33121 698 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 FEN1P39748 380 aaKnown RBP11.4□□□□□ -0.58
C9orf3-203ENST00000375315 DGKEP52429 567 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 MTAPQ13126 283 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 TSTA3Q13630 321 aaPredicted RBP11.4□□□□□ -0.58
C9orf3-203ENST00000375315 TRMT11Q7Z4G4 463 aaKnown RBP11.4□□□□□ -0.58
C9orf3-203ENST00000375315 TCEAL3Q969E4 200 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 SLC6A18Q96N87 628 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 FAM83CQ9BQN1 747 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 PDCD10Q9BUL8 212 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 SPATA5L1Q9BVQ7 753 aa11.4□□□□□ -0.58
C9orf3-203ENST00000375315 RIOK2Q9BVS4 552 aaKnown RBP11.4□□□□□ -0.58
C9orf3-203ENST00000375315 FN3KQ9H479 309 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms