RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 GPR85P60893 370 aa13.76□□□□□ -0.21
HSPG2-201ENST00000374673 COLEC12Q5KU26 742 aa13.76□□□□□ -0.21
HSPG2-201ENST00000374673 AP1ARQ63HQ0 302 aa13.76□□□□□ -0.21
HSPG2-201ENST00000374673 BICRALQ6AI39 1079 aa13.76□□□□□ -0.21
HSPG2-201ENST00000374673 SLC30A6Q6NXT4 461 aa13.76□□□□□ -0.21
HSPG2-201ENST00000374673 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.76□□□□□ -0.21
HSPG2-201ENST00000374673 ZAR1Q86SH2 424 aa13.76□□□□□ -0.21
HSPG2-201ENST00000374673 GALNT10Q86SR1 603 aa13.76□□□□□ -0.21
HSPG2-201ENST00000374673 FITM2Q8N6M3 262 aa13.76□□□□□ -0.21
HSPG2-201ENST00000374673 ZFP62Q8NB50 900 aaPredicted RBP13.76□□□□□ -0.21
HSPG2-201ENST00000374673 POGLUT1Q8NBL1 392 aa13.76□□□□□ -0.21
HSPG2-201ENST00000374673 GRHL3Q8TE85 626 aa13.76□□□□□ -0.21
HSPG2-201ENST00000374673 ROPN1LQ96C74 230 aa13.76□□□□□ -0.21
HSPG2-201ENST00000374673 FRMD6Q96NE9 622 aa13.76□□□□□ -0.21
HSPG2-201ENST00000374673 TAAR6Q96RI8 345 aa13.76□□□□□ -0.21
HSPG2-201ENST00000374673 IKZF5Q9H5V7 419 aa13.76□□□□□ -0.21
HSPG2-201ENST00000374673 POLE3Q9NRF9 147 aa13.76□□□□□ -0.21
HSPG2-201ENST00000374673 GID8Q9NWU2 228 aa13.76□□□□□ -0.21
HSPG2-201ENST00000374673 KLRF1Q9NZS2 232 aa13.76□□□□□ -0.21
HSPG2-201ENST00000374673 FLRT3Q9NZU0 649 aa13.76□□□□□ -0.21
HSPG2-201ENST00000374673 NINQ8N4C6 2090 aa13.76□□□□□ -0.21
HSPG2-201ENST00000374673 COL6A6A6NMZ7 2263 aa13.75□□□□□ -0.21
HSPG2-201ENST00000374673 NBEAQ8NFP9 2946 aa13.75□□□□□ -0.21
HSPG2-201ENST00000374673 PIEZO2Q9H5I5 2752 aa13.75□□□□□ -0.21
HSPG2-201ENST00000374673 A0A0G2JMM0 328 aa13.75□□□□□ -0.21
HSPG2-201ENST00000374673 A0A1W2PPB8 328 aa13.75□□□□□ -0.21
HSPG2-201ENST00000374673 A0A1W2PRS3 328 aa13.75□□□□□ -0.21
HSPG2-201ENST00000374673 PINLYPA6NC86 204 aa13.75□□□□□ -0.21
HSPG2-201ENST00000374673 KIR3DP1A8MWS1 328 aa13.75□□□□□ -0.21
HSPG2-201ENST00000374673 G3V3Y1 287 aa13.75□□□□□ -0.21
HSPG2-201ENST00000374673 SUV39H1O43463 412 aa13.75□□□□□ -0.21
HSPG2-201ENST00000374673 FADS1O60427 444 aa13.75□□□□□ -0.21
HSPG2-201ENST00000374673 TRIM3O75382 744 aaPredicted RBP13.75□□□□□ -0.21
HSPG2-201ENST00000374673 TNFRSF21O75509 655 aa13.75□□□□□ -0.21
HSPG2-201ENST00000374673 STX11O75558 287 aa13.75□□□□□ -0.21
HSPG2-201ENST00000374673 PRB1P04280 392 aa13.75□□□□□ -0.21
HSPG2-201ENST00000374673 TBXA2RP21731 343 aa13.75□□□□□ -0.21
HSPG2-201ENST00000374673 KCNJ2P63252 427 aa13.75□□□□□ -0.21
HSPG2-201ENST00000374673 CAPRIN1Q14444 709 aaKnown RBP13.75□□□□□ -0.21
HSPG2-201ENST00000374673 GRAMD1BQ3KR37 738 aa13.75□□□□□ -0.21
HSPG2-201ENST00000374673 NANOGP8Q6NSW7 305 aa13.75□□□□□ -0.21
HSPG2-201ENST00000374673 HACD2Q6Y1H2 254 aa13.75□□□□□ -0.21
HSPG2-201ENST00000374673 ZNF843Q8N446 348 aa13.75□□□□□ -0.21
HSPG2-201ENST00000374673 OR8J3Q8NGG0 315 aa13.75□□□□□ -0.21
HSPG2-201ENST00000374673 TMEM41AQ96HV5 264 aa13.75□□□□□ -0.21
HSPG2-201ENST00000374673 TRNT1Q96Q11 434 aaKnown RBP13.75□□□□□ -0.21
HSPG2-201ENST00000374673 DOHHQ9BU89 302 aa13.75□□□□□ -0.21
HSPG2-201ENST00000374673 HOXD1Q9GZZ0 328 aa13.75□□□□□ -0.21
HSPG2-201ENST00000374673 SAP130Q9H0E3 1048 aa13.75□□□□□ -0.21
HSPG2-201ENST00000374673 NANOGQ9H9S0 305 aa13.75□□□□□ -0.21
HSPG2-201ENST00000374673 EFCAB1Q9HAE3 211 aa13.75□□□□□ -0.21
HSPG2-201ENST00000374673 UBQLN4Q9NRR5 601 aa13.75□□□□□ -0.21
HSPG2-201ENST00000374673 TUBA8Q9NY65 449 aaPredicted RBP13.75□□□□□ -0.21
HSPG2-201ENST00000374673 P2RX2Q9UBL9 471 aa13.75□□□□□ -0.21
HSPG2-201ENST00000374673 RALYQ9UKM9 306 aaKnown RBP13.75□□□□□ -0.21
HSPG2-201ENST00000374673 ATRXP46100 2492 aa13.74□□□□□ -0.21
HSPG2-201ENST00000374673 A0A1W2PQD3 144 aa13.74□□□□□ -0.21
HSPG2-201ENST00000374673 EIF4E1BA6NMX2 242 aaKnown RBP13.74□□□□□ -0.21
HSPG2-201ENST00000374673 B8ZZF3 427 aa13.74□□□□□ -0.21
HSPG2-201ENST00000374673 ALG1L2C9J202 215 aa13.74□□□□□ -0.21
HSPG2-201ENST00000374673 NPIPB9F8W1W9 429 aa13.74□□□□□ -0.21
HSPG2-201ENST00000374673 ADAM10O14672 748 aa13.74□□□□□ -0.21
HSPG2-201ENST00000374673 AIM2O14862 343 aa13.74□□□□□ -0.21
HSPG2-201ENST00000374673 ZIC2O95409 532 aaPredicted RBP13.74□□□□□ -0.21
HSPG2-201ENST00000374673 OXSR1O95747 527 aaPredicted RBP13.74□□□□□ -0.21
HSPG2-201ENST00000374673 DCTP40126 519 aa13.74□□□□□ -0.21
HSPG2-201ENST00000374673 CLK3P49761 638 aaKnown RBP13.74□□□□□ -0.21
HSPG2-201ENST00000374673 GAS1P54826 345 aa13.74□□□□□ -0.21
HSPG2-201ENST00000374673 MTPNP58546 118 aa13.74□□□□□ -0.21
HSPG2-201ENST00000374673 HPCAP84074 193 aa13.74□□□□□ -0.21
HSPG2-201ENST00000374673 PMP22Q01453 160 aa13.74□□□□□ -0.21
HSPG2-201ENST00000374673 FOXO1Q12778 655 aa13.74□□□□□ -0.21
HSPG2-201ENST00000374673 SELPLGQ14242 412 aa13.74□□□□□ -0.21
HSPG2-201ENST00000374673 KRT72Q14CN4 511 aa13.74□□□□□ -0.21
HSPG2-201ENST00000374673 MAPK11Q15759 364 aa13.74□□□□□ -0.21
HSPG2-201ENST00000374673 SYPL1Q16563 259 aa13.74□□□□□ -0.21
HSPG2-201ENST00000374673 HYAL4Q2M3T9 481 aa13.74□□□□□ -0.21
HSPG2-201ENST00000374673 FLYWCH1Q4VC44 716 aa13.74□□□□□ -0.21
HSPG2-201ENST00000374673 GPAT3Q53EU6 434 aa13.74□□□□□ -0.21
HSPG2-201ENST00000374673 TYW3Q6IPR3 259 aaKnown RBP13.74□□□□□ -0.21
HSPG2-201ENST00000374673 FAM180AQ6UWF9 173 aa13.74□□□□□ -0.21
HSPG2-201ENST00000374673 FRRS1Q6ZNA5 592 aa13.74□□□□□ -0.21
HSPG2-201ENST00000374673 LRRC74BQ6ZQY2 392 aa13.74□□□□□ -0.21
HSPG2-201ENST00000374673 C10orf111Q8N326 155 aa13.74□□□□□ -0.21
HSPG2-201ENST00000374673 ANKFN1Q8N957 763 aa13.74□□□□□ -0.21
HSPG2-201ENST00000374673 OR4C3Q8NH37 302 aa13.74□□□□□ -0.21
HSPG2-201ENST00000374673 OIT3Q8WWZ8 545 aa13.74□□□□□ -0.21
HSPG2-201ENST00000374673 SNRNP40Q96DI7 357 aaKnown RBP13.74□□□□□ -0.21
HSPG2-201ENST00000374673 ZNF597Q96LX8 424 aa13.74□□□□□ -0.21
HSPG2-201ENST00000374673 SH3GL1Q99961 368 aa13.74□□□□□ -0.21
HSPG2-201ENST00000374673 SLC39A3Q9BRY0 314 aa13.74□□□□□ -0.21
HSPG2-201ENST00000374673 THUMPD3Q9BV44 507 aaKnown RBP13.74□□□□□ -0.21
HSPG2-201ENST00000374673 A4GALTQ9NPC4 353 aa13.74□□□□□ -0.21
HSPG2-201ENST00000374673 ARL8BQ9NVJ2 186 aa13.74□□□□□ -0.21
HSPG2-201ENST00000374673 TAGLN3Q9UI15 199 aa13.74□□□□□ -0.21
HSPG2-201ENST00000374673 BOKQ9UMX3 212 aaPredicted RBP13.74□□□□□ -0.21
HSPG2-201ENST00000374673 WDR45Q9Y484 360 aa13.74□□□□□ -0.21
HSPG2-201ENST00000374673 WIF1Q9Y5W5 379 aa13.74□□□□□ -0.21
HSPG2-201ENST00000374673 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.74□□□□□ -0.21
HSPG2-201ENST00000374673 IGSF10Q6WRI0 2623 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms