RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 DTD2Q96FN9 168 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 MYRFLQ96LU7 910 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 MGLLQ99685 303 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 CXXC1Q9P0U4 656 aaPredicted RBP12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 BLOC1S5-TXNDC5H3BN57 136 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 TMX2-CTNND1H3BSU7 103 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 H2AFB2P0C5Z0 115 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 DNASE1P24855 282 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 CHRNB4P30926 498 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 THEM6Q8WUY1 208 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 PEX11GQ96HA9 241 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 IL26Q9NPH9 171 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 SOBPA7XYQ1 873 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 H3BNC9 293 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 HCRTR2O43614 444 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 SCO2O43819 266 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 FARS2O95363 451 aaKnown RBP12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 HOXD9P28356 352 aaPredicted RBP12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 CD38P28907 300 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 NPRL3Q12980 569 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 RANBP10Q6VN20 620 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 PDZD9Q8IXQ8 264 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 RAB8BQ92930 207 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 SGK3Q96BR1 496 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 C16orf58Q96GQ5 468 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 ZFYVE21Q9BQ24 234 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 ANKRD60Q9BZ19 345 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 KCNK13Q9HB14 408 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 FOLH1BQ9HBA9 442 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 YARS2Q9Y2Z4 477 aaKnown RBP12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 ZNF701M0R085 212 aaPredicted RBP12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 MITFO75030 526 aaPredicted RBP12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 ZNF821O75541 412 aaPredicted RBP12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 DEDDO75618 318 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 APOA2P02652 100 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 PRSS56P0CW18 603 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 DEFB123Q8N688 67 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 OR13J1Q8NGT2 312 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 CPNE2Q96FN4 548 aaPredicted RBP12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 VSX1Q9NZR4 365 aaPredicted RBP12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 LRFN1Q9P244 771 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 PHIPQ8WWQ0 1821 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 CCDC163A0A0D9SF12 145 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 GKN3PP0CG01 181 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 CD97P48960 835 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 FNTBP49356 437 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 HUS1BQ8NHY5 278 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 RTP4Q96DX8 246 aa12.62□□□□□ -0.39
RAPGEF1-201ENST00000372189 SCAMP2O15127 329 aaKnown RBP12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 OR12D1P0DN82 309 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 GTF2F2P13984 249 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 CHMP24386 653 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 FAM189BP81408 668 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 OR4D1Q15615 310 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 SLC27A4Q6P1M0 643 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 TLDC1Q6P9B6 456 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 KIR2DS5A0A0G2JLQ3 304 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 A0A0G2JNG1 304 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 KIR2DS3K7RE56 304 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 FADS1O60427 444 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 CTBP2P56545 445 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 KIR2DS5Q14953 304 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 NSDHLQ15738 373 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 FAM69BQ5VUD6 431 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 TMEM107Q6UX40 140 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 LIPIQ6XZB0 460 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 CARM1Q86X55 608 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 GATSQ8NAP1 163 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 OR5AR1Q8NGP9 310 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 SLC12A9Q9BXP2 914 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 PRSS38A1L453 326 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 FAM227AF5H4B4 570 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 PCDH17O14917 1159 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 RNF13O43567 381 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 PPP3CBP16298 524 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 GGT1P19440 569 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 CELP19835 753 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 PDZD3Q86UT5 571 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 SLC7A5P1Q8MH63 180 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 TRAV20A0A0B4J274 112 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 BCAT2O15382 392 aaPredicted RBP12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 TSPAN15O95858 294 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 CLRN1P58418 232 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 SIX1Q15475 284 aaPredicted RBP12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 KANK2Q63ZY3 851 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 OR51G2Q8NGK0 314 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 FAM174AQ8TBP5 190 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 ZNF778Q96MU6 729 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 ERVK13-1Q9NX77 482 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 SOX30O94993 753 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 STSP08842 583 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 SPHARQ15513 63 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 DEFB110Q30KQ9 67 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 Q5PR19 223 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 C22orf42Q6IC83 251 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 GPR149Q86SP6 731 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 KLHDC8AQ8IYD2 350 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 KRTCAP2Q8N6L1 136 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 GPR26Q8NDV2 337 aa12.61□□□□□ -0.39
RAPGEF1-201ENST00000372189 OR8K5Q8NH50 307 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms