RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 NDUFAF6Q330K2 333 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 MFSD12Q6NUT3 480 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 USP43Q70EL4 1123 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 SPATC1Q76KD6 591 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 CYB561A3Q8NBI2 242 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 PFN4Q8NHR9 129 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 FCGR1BQ92637 280 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 HPS1Q92902 700 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 GAL3ST3Q96A11 431 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 RNFT2Q96EX2 444 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 PRRC1Q96M27 445 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 PTCHD1Q96NR3 888 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 TMED9Q9BVK6 235 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 DAPP1Q9UN19 280 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 CHST2Q9Y4C5 530 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 A0A0G2JPF8 293 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 SLC9B1P1A6NJY1 282 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 HNRNPCL2B2RXH8 293 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 HNRNPCL3B7ZW38 293 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 GYPBP06028 91 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 POU2F2P09086 479 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 HNRNPCL4P0DMR1 293 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 ZNF12P17014 697 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 RPS19P39019 145 aaKnown RBP10.97□□□□□ -0.65
PDE6C-201ENST00000371447 SLC9A3P48764 834 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 GXYLT1Q4G148 440 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 DGAT2L6Q6ZPD8 337 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 OOSP2Q86WS3 158 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 PEX5LQ8IYB4 626 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 MFSD4AQ8N468 514 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 OR51L1Q8NGJ5 315 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 OPALINQ96PE5 141 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 HDHD5Q9BXW7 423 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 ENOPH1Q9UHY7 261 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 TMA7Q9Y2S6 64 aaKnown RBP10.97□□□□□ -0.65
PDE6C-201ENST00000371447 RBMX2Q9Y388 322 aaKnown RBP10.97□□□□□ -0.65
PDE6C-201ENST00000371447 TSC22D4Q9Y3Q8 395 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 RPL36Q9Y3U8 105 aaKnown RBP10.97□□□□□ -0.65
PDE6C-201ENST00000371447 A0A1W2PRQ8 180 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 TRIM64BA6NI03 449 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 CDC42EP2O14613 210 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 SULT1C4O75897 302 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 CDRT1O95170 752 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 TNFP01375 233 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 IFNA16P05015 189 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 PORP16435 677 aaPredicted RBP10.97□□□□□ -0.65
PDE6C-201ENST00000371447 BCAP31P51572 246 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 TNFRSF17Q02223 184 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 C1DQ13901 141 aaKnown RBP10.97□□□□□ -0.65
PDE6C-201ENST00000371447 SMUG1Q53HV7 270 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 SLX4IPQ5VYV7 408 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 SLC27A4Q6P1M0 643 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 KBTBD8Q8NFY9 601 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 OR51G2Q8NGK0 314 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 SLC22A18Q96BI1 424 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 SLC41A3Q96GZ6 507 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 ZNF582Q96NG8 517 aaPredicted RBP10.97□□□□□ -0.65
PDE6C-201ENST00000371447 ENKD1Q9H0I2 346 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 POLMQ9NP87 494 aaPredicted RBP10.97□□□□□ -0.65
PDE6C-201ENST00000371447 TIGARQ9NQ88 270 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 SOHLH2Q9NX45 425 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 CELSR3Q9NYQ7 3312 aa10.97□□□□□ -0.65
PDE6C-201ENST00000371447 SSX4O60224 188 aa10.96□□□□□ -0.65
PDE6C-201ENST00000371447 PSMA1P25786 263 aaKnown RBP10.96□□□□□ -0.65
PDE6C-201ENST00000371447 CRTC2Q53ET0 693 aaPredicted RBP10.96□□□□□ -0.65
PDE6C-201ENST00000371447 ZMAT1Q5H9K5 638 aa10.96□□□□□ -0.65
PDE6C-201ENST00000371447 PRAMEF17Q5VTA0 474 aa10.96□□□□□ -0.65
PDE6C-201ENST00000371447 PIGXQ8TBF5 258 aa10.96□□□□□ -0.65
PDE6C-201ENST00000371447 SIGLEC11Q96RL6 698 aa10.96□□□□□ -0.65
PDE6C-201ENST00000371447 ZNF576Q9H609 170 aa10.96□□□□□ -0.65
PDE6C-201ENST00000371447 HHATLQ9HCP6 504 aa10.96□□□□□ -0.65
PDE6C-201ENST00000371447 C20orf141Q9NUB4 165 aa10.96□□□□□ -0.65
PDE6C-201ENST00000371447 PLCXD1Q9NUJ7 323 aa10.96□□□□□ -0.65
PDE6C-201ENST00000371447 H2AFY2Q9P0M6 372 aaPredicted RBP10.96□□□□□ -0.65
PDE6C-201ENST00000371447 NDOR1Q9UHB4 597 aa10.96□□□□□ -0.65
PDE6C-201ENST00000371447 OSGIN1Q9UJX0 560 aa10.96□□□□□ -0.65
PDE6C-201ENST00000371447 WBP11Q9Y2W2 641 aaKnown RBP10.96□□□□□ -0.65
PDE6C-201ENST00000371447 KIAA1549LQ6ZVL6 1849 aa10.96□□□□□ -0.65
PDE6C-201ENST00000371447 TRAV27A0A087WT01 109 aa10.96□□□□□ -0.66
PDE6C-201ENST00000371447 LOC110117498-PIK3R3F6TDL0 507 aa10.96□□□□□ -0.66
PDE6C-201ENST00000371447 SOCS6O14544 535 aa10.96□□□□□ -0.66
PDE6C-201ENST00000371447 DPM1O60762 260 aa10.96□□□□□ -0.66
PDE6C-201ENST00000371447 REM1O75628 298 aa10.96□□□□□ -0.66
PDE6C-201ENST00000371447 ACP2P11117 423 aa10.96□□□□□ -0.66
PDE6C-201ENST00000371447 ALAS2P22557 587 aa10.96□□□□□ -0.66
PDE6C-201ENST00000371447 CD40LGP29965 261 aa10.96□□□□□ -0.66
PDE6C-201ENST00000371447 SOX6P35712 828 aa10.96□□□□□ -0.66
PDE6C-201ENST00000371447 EIF2B2P49770 351 aaKnown RBP10.96□□□□□ -0.66
PDE6C-201ENST00000371447 SMSP52788 366 aa10.96□□□□□ -0.66
PDE6C-201ENST00000371447 TRA2BP62995 288 aaKnown RBP10.96□□□□□ -0.66
PDE6C-201ENST00000371447 ST3GAL3Q11203 375 aa10.96□□□□□ -0.66
PDE6C-201ENST00000371447 ELOAQ14241 798 aaKnown RBP10.96□□□□□ -0.66
PDE6C-201ENST00000371447 GNA13Q14344 377 aa10.96□□□□□ -0.66
PDE6C-201ENST00000371447 TRAM2Q15035 370 aa10.96□□□□□ -0.66
PDE6C-201ENST00000371447 RAB30Q15771 203 aa10.96□□□□□ -0.66
PDE6C-201ENST00000371447 SPANXN2Q5MJ10 180 aa10.96□□□□□ -0.66
PDE6C-201ENST00000371447 MRPL2Q5T653 305 aaKnown RBP10.96□□□□□ -0.66
PDE6C-201ENST00000371447 NKAIN2Q5VXU1 208 aa10.96□□□□□ -0.66
PDE6C-201ENST00000371447 STEAP3Q658P3 488 aa10.96□□□□□ -0.66
PDE6C-201ENST00000371447 FRRS1Q6ZNA5 592 aa10.96□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms