RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 RETP07949 1114 aa13.87□□□□□ -0.19
NDC1-201ENST00000371429 PCGF2P35227 344 aa13.87□□□□□ -0.19
NDC1-201ENST00000371429 INHBCP55103 352 aa13.87□□□□□ -0.19
NDC1-201ENST00000371429 RAB38P57729 211 aa13.87□□□□□ -0.19
NDC1-201ENST00000371429 TGFBR3Q03167 851 aa13.87□□□□□ -0.19
NDC1-201ENST00000371429 BNIP3Q12983 259 aa13.87□□□□□ -0.19
NDC1-201ENST00000371429 PLPP6Q8IY26 295 aa13.87□□□□□ -0.19
NDC1-201ENST00000371429 SYNPOQ8N3V7 929 aa13.87□□□□□ -0.19
NDC1-201ENST00000371429 SAMD8Q96LT4 415 aa13.87□□□□□ -0.19
NDC1-201ENST00000371429 CD93Q9NPY3 652 aa13.87□□□□□ -0.19
NDC1-201ENST00000371429 UBQLN4Q9NRR5 601 aa13.87□□□□□ -0.19
NDC1-201ENST00000371429 PCDH10Q9P2E7 1040 aa13.87□□□□□ -0.19
NDC1-201ENST00000371429 NENFQ9UMX5 172 aa13.87□□□□□ -0.19
NDC1-201ENST00000371429 SLC6A14Q9UN76 642 aa13.87□□□□□ -0.19
NDC1-201ENST00000371429 SCN9AQ15858 1988 aa13.87□□□□□ -0.19
NDC1-201ENST00000371429 FOXE1O00358 373 aaPredicted RBP13.87□□□□□ -0.19
NDC1-201ENST00000371429 SLC5A2P31639 672 aa13.87□□□□□ -0.19
NDC1-201ENST00000371429 STK11Q15831 433 aa13.87□□□□□ -0.19
NDC1-201ENST00000371429 OR5M10Q6IEU7 315 aa13.87□□□□□ -0.19
NDC1-201ENST00000371429 ZNF367Q7RTV3 350 aa13.87□□□□□ -0.19
NDC1-201ENST00000371429 OR14A16Q8NHC5 309 aa13.87□□□□□ -0.19
NDC1-201ENST00000371429 SNIP1Q8TAD8 396 aaKnown RBP13.87□□□□□ -0.19
NDC1-201ENST00000371429 FN3KQ9H479 309 aa13.87□□□□□ -0.19
NDC1-201ENST00000371429 FGF22Q9HCT0 170 aa13.87□□□□□ -0.19
NDC1-201ENST00000371429 NXT1Q9UKK6 140 aaKnown RBP13.87□□□□□ -0.19
NDC1-201ENST00000371429 PPP1R3DO95685 299 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 THBS2P35442 1172 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 OR7A5Q15622 319 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 CCNJQ5T5M9 372 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 KLBQ86Z14 1044 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 OR51L1Q8NGJ5 315 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 TMEM121BQ9BXQ6 578 aaPredicted RBP13.86□□□□□ -0.19
NDC1-201ENST00000371429 ADAM29Q9UKF5 820 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 TCRBV5S1A1TA0A578 114 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 H3BSA7 217 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 AIFM1O95831 613 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 ADH7P40394 386 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 EEF1A1P68104 462 aaKnown RBP13.86□□□□□ -0.19
NDC1-201ENST00000371429 APOFQ13790 326 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 CPZQ66K79 652 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 TUBA3EQ6PEY2 450 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 ZNF613Q6PF04 617 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 TMPRSS12Q86WS5 348 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 TMEM239Q8WW34 195 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 OR1E3Q8WZA6 343 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 KCNN1Q92952 543 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 OR4K3Q96R72 315 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 BTBD2Q9BX70 525 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 EURLQ9NYK6 297 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 KCND3Q9UK17 655 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 PCDHGA6Q9Y5G7 932 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 LINC01565O15544 149 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 MTNR1AP48039 350 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 ZNF404Q494X3 552 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 C14orf28Q4W4Y0 310 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 METTL4Q8N3J2 472 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 DTWD1Q8N5C7 304 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 CNEP1R1Q8N9A8 125 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 SORT1Q99523 831 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 DHRS4Q9BTZ2 278 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 TM7SF3Q9NS93 570 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 CNIH4Q9P003 139 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 OPN1LWP04000 364 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 C7P10643 843 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 CD79AP11912 226 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 CRABP1P29762 137 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 FRKP42685 505 aaPredicted RBP13.86□□□□□ -0.19
NDC1-201ENST00000371429 KIAA1024LP59773 190 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 ZNF423Q2M1K9 1284 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 C3orf38Q5JPI3 329 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 PLCZ1Q86YW0 608 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 FAM160A2Q8N612 972 aaPredicted RBP13.86□□□□□ -0.19
NDC1-201ENST00000371429 SFXN5Q8TD22 340 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 USP36Q9P275 1121 aaKnown RBP13.86□□□□□ -0.19
NDC1-201ENST00000371429 SCP2D1Q9UJQ7 156 aa13.86□□□□□ -0.19
NDC1-201ENST00000371429 CHP2O43745 196 aa13.85□□□□□ -0.19
NDC1-201ENST00000371429 E2F1Q01094 437 aa13.85□□□□□ -0.19
NDC1-201ENST00000371429 HNRNPA0Q13151 305 aaKnown RBP13.85□□□□□ -0.19
NDC1-201ENST00000371429 SPHARQ15513 63 aa13.85□□□□□ -0.19
NDC1-201ENST00000371429 ADIPOR2Q86V24 386 aa13.85□□□□□ -0.19
NDC1-201ENST00000371429 CTRCQ99895 268 aa13.85□□□□□ -0.19
NDC1-201ENST00000371429 FUZQ9BT04 418 aa13.85□□□□□ -0.19
NDC1-201ENST00000371429 SEMA6CQ9H3T2 930 aa13.85□□□□□ -0.19
NDC1-201ENST00000371429 MBNL1Q9NR56 388 aaKnown RBP13.85□□□□□ -0.19
NDC1-201ENST00000371429 ZNF701Q9NV72 531 aaPredicted RBP13.85□□□□□ -0.19
NDC1-201ENST00000371429 GPR52Q9Y2T5 361 aa13.85□□□□□ -0.19
NDC1-201ENST00000371429 OR14I1A6ND48 311 aa13.85□□□□□ -0.19
NDC1-201ENST00000371429 GALR3O60755 368 aaPredicted RBP13.85□□□□□ -0.19
NDC1-201ENST00000371429 CD3GP09693 182 aa13.85□□□□□ -0.19
NDC1-201ENST00000371429 OSMP13725 252 aa13.85□□□□□ -0.19
NDC1-201ENST00000371429 HTR3AP46098 478 aa13.85□□□□□ -0.19
NDC1-201ENST00000371429 DAP3P51398 398 aaKnown RBP13.85□□□□□ -0.19
NDC1-201ENST00000371429 PIGGQ5H8A4 983 aa13.85□□□□□ -0.19
NDC1-201ENST00000371429 SHFQ7M4L6 423 aa13.85□□□□□ -0.19
NDC1-201ENST00000371429 SAMD12Q8N8I0 201 aa13.85□□□□□ -0.19
NDC1-201ENST00000371429 ZNF615Q8N8J6 731 aa13.85□□□□□ -0.19
NDC1-201ENST00000371429 OR13C3Q8NGS6 347 aa13.85□□□□□ -0.19
NDC1-201ENST00000371429 SLC7A6OSQ96CW6 309 aaPredicted RBP13.85□□□□□ -0.19
NDC1-201ENST00000371429 ACSS1Q9NUB1 689 aaPredicted RBP13.85□□□□□ -0.19
NDC1-201ENST00000371429 COL18A1P39060 1754 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms