RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 PISDQ9UG56 409 aa16.11■□□□□ 0.17
UBE3D-203ENST00000369747 B3GALT1Q9Y5Z6 326 aa16.11■□□□□ 0.17
UBE3D-203ENST00000369747 SPTBN2O15020 2390 aa16.11■□□□□ 0.17
UBE3D-203ENST00000369747 PIEZO1Q92508 2521 aa16.11■□□□□ 0.17
UBE3D-203ENST00000369747 EPPINO95925 133 aa16.11■□□□□ 0.17
UBE3D-203ENST00000369747 GASTP01350 101 aa16.11■□□□□ 0.17
UBE3D-203ENST00000369747 POU2F1P14859 743 aa16.11■□□□□ 0.17
UBE3D-203ENST00000369747 EMX1Q04741 257 aaPredicted RBP16.11■□□□□ 0.17
UBE3D-203ENST00000369747 FOXD4Q12950 439 aaPredicted RBP16.11■□□□□ 0.17
UBE3D-203ENST00000369747 DYNC1I2Q13409 638 aaKnown RBP16.11■□□□□ 0.17
UBE3D-203ENST00000369747 NPTX1Q15818 432 aa16.11■□□□□ 0.17
UBE3D-203ENST00000369747 RSPO4Q2I0M5 234 aaPredicted RBP16.11■□□□□ 0.17
UBE3D-203ENST00000369747 YOD1Q5VVQ6 348 aaPredicted RBP16.11■□□□□ 0.17
UBE3D-203ENST00000369747 DEF8Q6ZN54 512 aa16.11■□□□□ 0.17
UBE3D-203ENST00000369747 BPHLQ86WA6 291 aaPredicted RBP16.11■□□□□ 0.17
UBE3D-203ENST00000369747 TAGAPQ8N103 731 aa16.11■□□□□ 0.17
UBE3D-203ENST00000369747 AQP11Q8NBQ7 271 aa16.11■□□□□ 0.17
UBE3D-203ENST00000369747 OR51Q1Q8NH59 317 aa16.11■□□□□ 0.17
UBE3D-203ENST00000369747 GTPBP3Q969Y2 492 aaKnown RBP16.11■□□□□ 0.17
UBE3D-203ENST00000369747 OR7D2Q96RA2 312 aa16.11■□□□□ 0.17
UBE3D-203ENST00000369747 ZNF556Q9HAH1 456 aa16.11■□□□□ 0.17
UBE3D-203ENST00000369747 C3orf14Q9HBI5 128 aa16.11■□□□□ 0.17
UBE3D-203ENST00000369747 ACAD8Q9UKU7 415 aa16.11■□□□□ 0.17
UBE3D-203ENST00000369747 HEMK1Q9Y5R4 338 aaPredicted RBP16.11■□□□□ 0.17
UBE3D-203ENST00000369747 OR2W5A6NFC9 320 aa16.1■□□□□ 0.17
UBE3D-203ENST00000369747 PLD2O14939 933 aa16.1■□□□□ 0.17
UBE3D-203ENST00000369747 FAM20BO75063 409 aa16.1■□□□□ 0.17
UBE3D-203ENST00000369747 CDC123O75794 336 aaPredicted RBP16.1■□□□□ 0.17
UBE3D-203ENST00000369747 JMJD7P0C870 316 aa16.1■□□□□ 0.17
UBE3D-203ENST00000369747 ELAVL4P26378 380 aaKnown RBP16.1■□□□□ 0.17
UBE3D-203ENST00000369747 TMBIM6P55061 237 aa16.1■□□□□ 0.17
UBE3D-203ENST00000369747 ERV3-1Q14264 604 aa16.1■□□□□ 0.17
UBE3D-203ENST00000369747 C3orf38Q5JPI3 329 aa16.1■□□□□ 0.17
UBE3D-203ENST00000369747 NIPAL1Q6NVV3 410 aa16.1■□□□□ 0.17
UBE3D-203ENST00000369747 LRRC25Q8N386 305 aaPredicted RBP16.1■□□□□ 0.17
UBE3D-203ENST00000369747 PARP8Q8N3A8 854 aa16.1■□□□□ 0.17
UBE3D-203ENST00000369747 ZNF540Q8NDQ6 660 aa16.1■□□□□ 0.17
UBE3D-203ENST00000369747 FAR1Q8WVX9 515 aa16.1■□□□□ 0.17
UBE3D-203ENST00000369747 COL26A1Q96A83 441 aa16.1■□□□□ 0.17
UBE3D-203ENST00000369747 BTBD2Q9BX70 525 aa16.1■□□□□ 0.17
UBE3D-203ENST00000369747 DGCR6LQ9BY27 220 aa16.1■□□□□ 0.17
UBE3D-203ENST00000369747 AKIRIN1Q9H9L7 192 aaPredicted RBP16.1■□□□□ 0.17
UBE3D-203ENST00000369747 ZNF304Q9HCX3 659 aa16.1■□□□□ 0.17
UBE3D-203ENST00000369747 EQTNQ9NQ60 294 aa16.1■□□□□ 0.17
UBE3D-203ENST00000369747 SLC22A11Q9NSA0 550 aa16.1■□□□□ 0.17
UBE3D-203ENST00000369747 MS4A12Q9NXJ0 267 aa16.1■□□□□ 0.17
UBE3D-203ENST00000369747 SATB2Q9UPW6 733 aa16.1■□□□□ 0.17
UBE3D-203ENST00000369747 PCDHGA10Q9Y5H3 936 aa16.1■□□□□ 0.17
UBE3D-203ENST00000369747 CCDC187A0A096LP49 1063 aa16.09■□□□□ 0.17
UBE3D-203ENST00000369747 A0A0G2JPF8 293 aa16.09■□□□□ 0.17
UBE3D-203ENST00000369747 HNRNPCL2B2RXH8 293 aa16.09■□□□□ 0.17
UBE3D-203ENST00000369747 HNRNPCL3B7ZW38 293 aa16.09■□□□□ 0.17
UBE3D-203ENST00000369747 INMTO95050 263 aa16.09■□□□□ 0.17
UBE3D-203ENST00000369747 HNRNPCL4P0DMR1 293 aa16.09■□□□□ 0.17
UBE3D-203ENST00000369747 XKP51811 444 aa16.09■□□□□ 0.17
UBE3D-203ENST00000369747 GP2P55259 537 aaKnown RBP16.09■□□□□ 0.17
UBE3D-203ENST00000369747 RAB38P57729 211 aa16.09■□□□□ 0.17
UBE3D-203ENST00000369747 DSG2Q14126 1118 aa16.09■□□□□ 0.17
UBE3D-203ENST00000369747 GNA13Q14344 377 aa16.09■□□□□ 0.17
UBE3D-203ENST00000369747 SEC23BQ15437 767 aa16.09■□□□□ 0.17
UBE3D-203ENST00000369747 KLHL17Q6TDP4 642 aa16.09■□□□□ 0.17
UBE3D-203ENST00000369747 HMGN2P46Q86SG4 172 aa16.09■□□□□ 0.17
UBE3D-203ENST00000369747 OR4N5Q8IXE1 308 aa16.09■□□□□ 0.17
UBE3D-203ENST00000369747 OR7G2Q8NG99 324 aa16.09■□□□□ 0.17
UBE3D-203ENST00000369747 FAM81AQ8TBF8 368 aa16.09■□□□□ 0.17
UBE3D-203ENST00000369747 YIPF2Q9BWQ6 316 aa16.09■□□□□ 0.17
UBE3D-203ENST00000369747 ULBP3Q9BZM4 244 aa16.09■□□□□ 0.17
UBE3D-203ENST00000369747 DLL3Q9NYJ7 618 aa16.09■□□□□ 0.17
UBE3D-203ENST00000369747 NTMQ9P121 344 aa16.09■□□□□ 0.17
UBE3D-203ENST00000369747 SPTBN4Q9H254 2564 aa16.09■□□□□ 0.17
UBE3D-203ENST00000369747 TEX51A0A1B0GUA7 166 aa16.09■□□□□ 0.17
UBE3D-203ENST00000369747 DCDC2BA2VCK2 349 aa16.09■□□□□ 0.17
UBE3D-203ENST00000369747 M0R3H8 397 aa16.09■□□□□ 0.17
UBE3D-203ENST00000369747 ASNA1O43681 348 aa16.09■□□□□ 0.17
UBE3D-203ENST00000369747 LDB3O75112 727 aa16.09■□□□□ 0.17
UBE3D-203ENST00000369747 NME6O75414 186 aaPredicted RBP16.09■□□□□ 0.17
UBE3D-203ENST00000369747 MT-ND2P03891 347 aa16.09■□□□□ 0.17
UBE3D-203ENST00000369747 H1F0P07305 194 aaKnown RBP16.09■□□□□ 0.17
UBE3D-203ENST00000369747 RNH1P13489 461 aaKnown RBP16.09■□□□□ 0.17
UBE3D-203ENST00000369747 TLX1P31314 330 aaPredicted RBP16.09■□□□□ 0.17
UBE3D-203ENST00000369747 GPAT3Q53EU6 434 aa16.09■□□□□ 0.17
UBE3D-203ENST00000369747 FGD3Q5JSP0 725 aa16.09■□□□□ 0.17
UBE3D-203ENST00000369747 DCAF12Q5T6F0 453 aa16.09■□□□□ 0.17
UBE3D-203ENST00000369747 PRAMEF8Q5VWM4 474 aa16.09■□□□□ 0.17
UBE3D-203ENST00000369747 PRAMEF7Q5VXH5 474 aa16.09■□□□□ 0.17
UBE3D-203ENST00000369747 FAM111BQ6SJ93 734 aa16.09■□□□□ 0.17
UBE3D-203ENST00000369747 OR4K14Q8NGD5 310 aa16.09■□□□□ 0.17
UBE3D-203ENST00000369747 RHOXF1Q8NHV9 184 aa16.09■□□□□ 0.17
UBE3D-203ENST00000369747 SIGLEC11Q96RL6 698 aa16.09■□□□□ 0.17
UBE3D-203ENST00000369747 FUZQ9BT04 418 aa16.09■□□□□ 0.17
UBE3D-203ENST00000369747 DCUN1D5Q9BTE7 237 aa16.09■□□□□ 0.17
UBE3D-203ENST00000369747 SPATA5L1Q9BVQ7 753 aa16.09■□□□□ 0.17
UBE3D-203ENST00000369747 A4GNTQ9UNA3 340 aa16.09■□□□□ 0.17
UBE3D-203ENST00000369747 SPACA6W5XKT8 324 aa16.09■□□□□ 0.17
UBE3D-203ENST00000369747 CPNE3O75131 537 aaKnown RBP16.08■□□□□ 0.16
UBE3D-203ENST00000369747 LGI1O95970 557 aa16.08■□□□□ 0.16
UBE3D-203ENST00000369747 FBLP22087 321 aaKnown RBP16.08■□□□□ 0.16
UBE3D-203ENST00000369747 RORAP35398 523 aa16.08■□□□□ 0.16
UBE3D-203ENST00000369747 MAP2K4P45985 399 aa16.08■□□□□ 0.16
UBE3D-203ENST00000369747 MASP1P48740 699 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms