RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 G3V2T6 193 aa22.09■■□□□ 1.13
SNX3-203ENST00000368979 J3KTA2 159 aa22.09■■□□□ 1.13
SNX3-203ENST00000368979 M0R3H8 397 aa22.09■■□□□ 1.13
SNX3-203ENST00000368979 PEX12O00623 359 aa22.09■■□□□ 1.13
SNX3-203ENST00000368979 EI24O14681 340 aa22.09■■□□□ 1.13
SNX3-203ENST00000368979 ADAMDEC1O15204 470 aa22.09■■□□□ 1.13
SNX3-203ENST00000368979 E2F6O75461 281 aa22.09■■□□□ 1.13
SNX3-203ENST00000368979 UGT2B17O75795 530 aa22.09■■□□□ 1.13
SNX3-203ENST00000368979 NPIPA8P0DM63 369 aa22.09■■□□□ 1.13
SNX3-203ENST00000368979 RHCEP18577 417 aa22.09■■□□□ 1.13
SNX3-203ENST00000368979 ATP6V1C1P21283 382 aa22.09■■□□□ 1.13
SNX3-203ENST00000368979 RRM2P31350 389 aa22.09■■□□□ 1.13
SNX3-203ENST00000368979 PPP1R8Q12972 351 aaKnown RBP22.09■■□□□ 1.13
SNX3-203ENST00000368979 LARS2Q15031 903 aaKnown RBP22.09■■□□□ 1.13
SNX3-203ENST00000368979 CPEB4Q17RY0 729 aaKnown RBP eCLIP22.09■■□□□ 1.13
SNX3-203ENST00000368979 FLYWCH1Q4VC44 716 aa22.09■■□□□ 1.13
SNX3-203ENST00000368979 FAM69BQ5VUD6 431 aa22.09■■□□□ 1.13
SNX3-203ENST00000368979 SHQ1Q6PI26 577 aaKnown RBP22.09■■□□□ 1.13
SNX3-203ENST00000368979 APCDD1LQ8NCL9 501 aa22.09■■□□□ 1.13
SNX3-203ENST00000368979 VANGL1Q8TAA9 524 aaPredicted RBP22.09■■□□□ 1.13
SNX3-203ENST00000368979 ZNF597Q96LX8 424 aa22.09■■□□□ 1.13
SNX3-203ENST00000368979 LPAR4Q99677 370 aa22.09■■□□□ 1.13
SNX3-203ENST00000368979 PIP5K1AQ99755 562 aa22.09■■□□□ 1.13
SNX3-203ENST00000368979 G6PC3Q9BUM1 346 aa22.09■■□□□ 1.13
SNX3-203ENST00000368979 WWTR1Q9GZV5 400 aa22.09■■□□□ 1.13
SNX3-203ENST00000368979 REEP1Q9H902 201 aa22.09■■□□□ 1.13
SNX3-203ENST00000368979 PCDHGA10Q9Y5H3 936 aa22.09■■□□□ 1.13
SNX3-203ENST00000368979 U3KQV3 271 aa22.09■■□□□ 1.13
SNX3-203ENST00000368979 CCDC88CQ9P219 2028 aa22.08■■□□□ 1.13
SNX3-203ENST00000368979 SEMA7AO75326 666 aa22.08■■□□□ 1.13
SNX3-203ENST00000368979 CD63P08962 238 aa22.08■■□□□ 1.13
SNX3-203ENST00000368979 CCNYL3P0C7X3 344 aa22.08■■□□□ 1.13
SNX3-203ENST00000368979 IL7RP16871 459 aa22.08■■□□□ 1.13
SNX3-203ENST00000368979 FPR1P21462 350 aa22.08■■□□□ 1.13
SNX3-203ENST00000368979 DNAJA1P31689 397 aaKnown RBP22.08■■□□□ 1.13
SNX3-203ENST00000368979 YAP1P46937 504 aaKnown RBP22.08■■□□□ 1.13
SNX3-203ENST00000368979 EEF1A1P68104 462 aaKnown RBP22.08■■□□□ 1.13
SNX3-203ENST00000368979 TARDBPQ13148 414 aaKnown RBP eCLIP22.08■■□□□ 1.13
SNX3-203ENST00000368979 LIN52Q52LA3 116 aa22.08■■□□□ 1.13
SNX3-203ENST00000368979 SLC29A4Q7RTT9 530 aa22.08■■□□□ 1.13
SNX3-203ENST00000368979 RBM45Q8IUH3 476 aaKnown RBP22.08■■□□□ 1.13
SNX3-203ENST00000368979 ZNF441Q8N8Z8 693 aa22.08■■□□□ 1.13
SNX3-203ENST00000368979 C8orf44Q96CB5 159 aa22.08■■□□□ 1.13
SNX3-203ENST00000368979 EPYCQ99645 322 aa22.08■■□□□ 1.13
SNX3-203ENST00000368979 KCND3Q9UK17 655 aa22.08■■□□□ 1.13
SNX3-203ENST00000368979 ZNF232Q9UNY5 417 aa22.08■■□□□ 1.13
SNX3-203ENST00000368979 SAMHD1Q9Y3Z3 626 aaKnown RBP22.08■■□□□ 1.13
SNX3-203ENST00000368979 TESMINQ9Y4I5 508 aa22.08■■□□□ 1.13
SNX3-203ENST00000368979 MAGED1Q9Y5V3 778 aaPredicted RBP22.08■■□□□ 1.13
SNX3-203ENST00000368979 PCNX2A6NKB5 2137 aa22.08■■□□□ 1.12
SNX3-203ENST00000368979 C7orf72A4D263 438 aa22.07■■□□□ 1.12
SNX3-203ENST00000368979 NPIPB9F8W1W9 429 aa22.07■■□□□ 1.12
SNX3-203ENST00000368979 RAB40ALP0C0E4 278 aa22.07■■□□□ 1.12
SNX3-203ENST00000368979 NID1P14543 1247 aa22.07■■□□□ 1.12
SNX3-203ENST00000368979 ACADSP16219 412 aa22.07■■□□□ 1.12
SNX3-203ENST00000368979 RFX3P48380 749 aa22.07■■□□□ 1.12
SNX3-203ENST00000368979 TAF11Q15544 211 aa22.07■■□□□ 1.12
SNX3-203ENST00000368979 RNF220Q5VTB9 566 aa22.07■■□□□ 1.12
SNX3-203ENST00000368979 TCTN3Q6NUS6 607 aa22.07■■□□□ 1.12
SNX3-203ENST00000368979 STK32CQ86UX6 486 aa22.07■■□□□ 1.12
SNX3-203ENST00000368979 HIPK1Q86Z02 1210 aa22.07■■□□□ 1.12
SNX3-203ENST00000368979 HS3ST5Q8IZT8 346 aa22.07■■□□□ 1.12
SNX3-203ENST00000368979 CLIP4Q8N3C7 705 aa22.07■■□□□ 1.12
SNX3-203ENST00000368979 C17orf47Q8NEP4 570 aa22.07■■□□□ 1.12
SNX3-203ENST00000368979 SDCCAG3Q96C92 435 aa22.07■■□□□ 1.12
SNX3-203ENST00000368979 NRBF2Q96F24 287 aa22.07■■□□□ 1.12
SNX3-203ENST00000368979 GAL3ST4Q96RP7 486 aa22.07■■□□□ 1.12
SNX3-203ENST00000368979 B3GNT4Q9C0J1 378 aa22.07■■□□□ 1.12
SNX3-203ENST00000368979 GABARAPL1Q9H0R8 117 aa22.07■■□□□ 1.12
SNX3-203ENST00000368979 SLC13A4Q9UKG4 626 aa22.07■■□□□ 1.12
SNX3-203ENST00000368979 ACAD8Q9UKU7 415 aa22.07■■□□□ 1.12
SNX3-203ENST00000368979 FAM32AQ9Y421 112 aaKnown RBP22.07■■□□□ 1.12
SNX3-203ENST00000368979 LYVE1Q9Y5Y7 322 aa22.07■■□□□ 1.12
SNX3-203ENST00000368979 PCDH17O14917 1159 aa22.06■■□□□ 1.12
SNX3-203ENST00000368979 TO15178 435 aa22.06■■□□□ 1.12
SNX3-203ENST00000368979 PRKNO60260 465 aaPredicted RBP22.06■■□□□ 1.12
SNX3-203ENST00000368979 SEC24DO94855 1032 aaPredicted RBP22.06■■□□□ 1.12
SNX3-203ENST00000368979 FOLR3P41439 243 aa22.06■■□□□ 1.12
SNX3-203ENST00000368979 SPIBQ01892 262 aa22.06■■□□□ 1.12
SNX3-203ENST00000368979 NPTX1Q15818 432 aa22.06■■□□□ 1.12
SNX3-203ENST00000368979 DECR1Q16698 335 aa22.06■■□□□ 1.12
SNX3-203ENST00000368979 EIPR1Q53HC9 387 aa22.06■■□□□ 1.12
SNX3-203ENST00000368979 CMPK2Q5EBM0 449 aa22.06■■□□□ 1.12
SNX3-203ENST00000368979 OTUD3Q5T2D3 398 aaPredicted RBP22.06■■□□□ 1.12
SNX3-203ENST00000368979 HLA-DQA1Q5Y7H0 255 aa22.06■■□□□ 1.12
SNX3-203ENST00000368979 DEF8Q6ZN54 512 aa22.06■■□□□ 1.12
SNX3-203ENST00000368979 TMPRSS12Q86WS5 348 aa22.06■■□□□ 1.12
SNX3-203ENST00000368979 AMER2Q8N7J2 671 aa22.06■■□□□ 1.12
SNX3-203ENST00000368979 OR6T1Q8NGN1 323 aa22.06■■□□□ 1.12
SNX3-203ENST00000368979 CT55Q8WUE5 264 aa22.06■■□□□ 1.12
SNX3-203ENST00000368979 VMP1Q96GC9 406 aa22.06■■□□□ 1.12
SNX3-203ENST00000368979 LMF1Q96S06 567 aa22.06■■□□□ 1.12
SNX3-203ENST00000368979 KLHL28Q9NXS3 571 aa22.06■■□□□ 1.12
SNX3-203ENST00000368979 CLDN24A6NM45 220 aa22.06■■□□□ 1.12
SNX3-203ENST00000368979 FFAR1O14842 300 aa22.06■■□□□ 1.12
SNX3-203ENST00000368979 IL33O95760 270 aa22.06■■□□□ 1.12
SNX3-203ENST00000368979 CEACAM1P13688 526 aa22.06■■□□□ 1.12
SNX3-203ENST00000368979 HSPA13P48723 471 aa22.06■■□□□ 1.12
SNX3-203ENST00000368979 SLC26A5P58743 744 aa22.06■■□□□ 1.12
SNX3-203ENST00000368979 PPP2R2BQ00005 443 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms