RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 P2RX2Q9UBL9 471 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 BAG5Q9UL15 447 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 TCFL5Q9UL49 500 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 C15orf41Q9Y2V0 281 aa8.16□□□□□ -1.1
SNX27-201ENST00000368838 GPC6Q9Y625 555 aaPredicted RBP8.16□□□□□ -1.1
SNX27-201ENST00000368838 A0A0A6YYC8 382 aaPredicted RBP8.15□□□□□ -1.1
SNX27-201ENST00000368838 I3L1I5 382 aaPredicted RBP8.15□□□□□ -1.1
SNX27-201ENST00000368838 SGK494L7N484 410 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 CLOCKO15516 846 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 FGF17O60258 216 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 PRKD3O94806 890 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 NKX2-2O95096 273 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 MFN2O95140 757 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 MED26O95402 600 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 HPRP00739 348 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 HMGN2P05204 90 aaKnown RBP8.15□□□□□ -1.1
SNX27-201ENST00000368838 CD63P08962 238 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 ETFAP13804 333 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 NCK1P16333 377 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 ATF4P18848 351 aaPredicted RBP8.15□□□□□ -1.1
SNX27-201ENST00000368838 S1PR1P21453 382 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 MATN1P21941 496 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 GPC1P35052 558 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 KCNJ10P78508 379 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 DUSP2Q05923 314 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 HSPB3Q12988 150 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 EIF2S3LQ2VIR3 472 aaKnown RBP8.15□□□□□ -1.1
SNX27-201ENST00000368838 MLIPQ5VWP3 458 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 HMBOX1Q6NT76 420 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 ZNF517Q6ZMY9 492 aaPredicted RBP8.15□□□□□ -1.1
SNX27-201ENST00000368838 PRSS41Q7RTY9 318 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 KRT73Q86Y46 540 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 HORMAD2Q8N7B1 307 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 C17orf47Q8NEP4 570 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 NUP43Q8NFH3 380 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 OR51Q1Q8NH59 317 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 ADAMTS17Q8TE56 1095 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 DNAJC9Q8WXX5 260 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 THAP4Q8WY91 577 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 UCN3Q969E3 161 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 RBM18Q96H35 190 aaKnown RBP8.15□□□□□ -1.1
SNX27-201ENST00000368838 SLC35G5Q96KT7 338 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 ZNF607Q96SK3 696 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 PSD2Q9BQI7 771 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 C9orf16Q9BUW7 83 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 SPRTNQ9H040 489 aaPredicted RBP8.15□□□□□ -1.1
SNX27-201ENST00000368838 GABARAPL1Q9H0R8 117 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 SERHL2Q9H4I8 314 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 NTN4Q9HB63 628 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 ZNF304Q9HCX3 659 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 PRTFDC1Q9NRG1 225 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 C14orf105Q9NVL8 296 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 USE1Q9NZ43 259 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 C5AR2Q9P296 337 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 RAB26Q9ULW5 256 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 USP22Q9UPT9 525 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 AURKCQ9UQB9 309 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 LRCH1Q9Y2L9 728 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 ITPR2Q14571 2701 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 CRYBG3Q68DQ2 2970 aa8.15□□□□□ -1.1
SNX27-201ENST00000368838 NOTCH2Q04721 2471 aa8.14□□□□□ -1.11
SNX27-201ENST00000368838 A0A1W2PQ72 361 aa8.14□□□□□ -1.11
SNX27-201ENST00000368838 TCRBV16S1A1N1A0A5B0 115 aa8.14□□□□□ -1.11
SNX27-201ENST00000368838 ARRDC5A6NEK1 342 aa8.14□□□□□ -1.11
SNX27-201ENST00000368838 VSTM2BA6NLU5 285 aa8.14□□□□□ -1.11
SNX27-201ENST00000368838 M0QX08 132 aa8.14□□□□□ -1.11
SNX27-201ENST00000368838 ACOX3O15254 700 aa8.14□□□□□ -1.11
SNX27-201ENST00000368838 DENRO43583 198 aaKnown RBP8.14□□□□□ -1.11
SNX27-201ENST00000368838 DNAJB6O75190 326 aa8.14□□□□□ -1.11
SNX27-201ENST00000368838 RDH16O75452 317 aa8.14□□□□□ -1.11
SNX27-201ENST00000368838 BAG2O95816 211 aa8.14□□□□□ -1.11
SNX27-201ENST00000368838 SERPINA1P01009 418 aa8.14□□□□□ -1.11
SNX27-201ENST00000368838 THBS1P07996 1170 aa8.14□□□□□ -1.11
SNX27-201ENST00000368838 ATP6V1C1P21283 382 aa8.14□□□□□ -1.11
SNX27-201ENST00000368838 FEN1P39748 380 aaKnown RBP8.14□□□□□ -1.11
SNX27-201ENST00000368838 MC3RP41968 323 aa8.14□□□□□ -1.11
SNX27-201ENST00000368838 KCNJ5P48544 419 aa8.14□□□□□ -1.11
SNX27-201ENST00000368838 EPS8Q12929 822 aa8.14□□□□□ -1.11
SNX27-201ENST00000368838 NCF4Q15080 339 aa8.14□□□□□ -1.11
SNX27-201ENST00000368838 TRIP10Q15642 601 aa8.14□□□□□ -1.11
SNX27-201ENST00000368838 INPP5JQ15735 1006 aaPredicted RBP8.14□□□□□ -1.11
SNX27-201ENST00000368838 ARHGAP11BQ3KRB8 267 aa8.14□□□□□ -1.11
SNX27-201ENST00000368838 SPDYE7PQ495Y7 208 aa8.14□□□□□ -1.11
SNX27-201ENST00000368838 CYBRD1Q53TN4 286 aa8.14□□□□□ -1.11
SNX27-201ENST00000368838 JMJD6Q6NYC1 403 aaPredicted RBP8.14□□□□□ -1.11
SNX27-201ENST00000368838 MYO7BQ6PIF6 2116 aa8.14□□□□□ -1.11
SNX27-201ENST00000368838 GALNT12Q8IXK2 581 aa8.14□□□□□ -1.11
SNX27-201ENST00000368838 RBMXL3Q8N7X1 1067 aaKnown RBP8.14□□□□□ -1.11
SNX27-201ENST00000368838 Q8NA96 180 aa8.14□□□□□ -1.11
SNX27-201ENST00000368838 TMEM52Q8NDY8 209 aa8.14□□□□□ -1.11
SNX27-201ENST00000368838 TOR1AIP2Q8NFQ8 470 aa8.14□□□□□ -1.11
SNX27-201ENST00000368838 OR7G2Q8NG99 324 aa8.14□□□□□ -1.11
SNX27-201ENST00000368838 OR5T3Q8NGG3 340 aa8.14□□□□□ -1.11
SNX27-201ENST00000368838 OR9A2Q8NGT5 310 aa8.14□□□□□ -1.11
SNX27-201ENST00000368838 GEMIN6Q8WXD5 167 aaKnown RBP8.14□□□□□ -1.11
SNX27-201ENST00000368838 LRTOMTQ8WZ04 291 aa8.14□□□□□ -1.11
SNX27-201ENST00000368838 NACC2Q96BF6 587 aa8.14□□□□□ -1.11
SNX27-201ENST00000368838 SLC47A1Q96FL8 570 aa8.14□□□□□ -1.11
SNX27-201ENST00000368838 ART5Q96L15 291 aa8.14□□□□□ -1.11
SNX27-201ENST00000368838 TREX2Q9BQ50 279 aaPredicted RBP8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms