RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 MAGEB2O15479 319 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 UGDHO60701 494 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 ALDOAP04075 364 aaKnown RBP4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 CHRM5P08912 532 aaPredicted RBP4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 CTXN2P0C2S0 81 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 TMEM191BP0C7N4 346 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 GSTT2P0CG29 244 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 GSTT2BP0CG30 244 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 PNMTP11086 282 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 ARSAP15289 507 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 UGT1A6P19224 532 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 MAGP20916 626 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 GPD1P21695 349 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 PRPH2P23942 346 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 EEF1B2P24534 225 aaKnown RBP4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 ITGA3P26006 1051 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 TYK2P29597 1187 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 PRDX6P30041 224 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 STAT6P42226 847 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 ALDH3B2P48448 385 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 RAB9AP51151 201 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 RGS8P57771 180 aaPredicted RBP4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 ACTBP60709 375 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 ACTA2P62736 377 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 ACTG1P63261 375 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 ACTG2P63267 376 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 ACTC1P68032 377 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 ACTA1P68133 377 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 EFNB1P98172 346 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 TSPAN31Q12999 210 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 NAE1Q13564 534 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 TGFBIQ15582 683 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 FAM189A2Q15884 450 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 PPP1R3AQ16821 1122 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 EXOC3L2Q2M3D2 409 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 ALKBH6Q3KRA9 238 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 CBWD6Q4V339 395 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 KLHL22Q53GT1 634 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 COQ5Q5HYK3 327 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 CBWD3Q5JTY5 395 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 C6orf183Q5T699 404 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 SEL1L2Q5TEA6 688 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 LIPNQ5VXI9 398 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 RAET1LQ5VY80 246 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 DENND2CQ68D51 928 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 DUPD1Q68J44 220 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 PODNL1Q6PEZ8 512 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 FAM151BQ6UXP7 276 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 DLEU7Q6UYE1 221 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 C3orf62Q6ZUJ4 267 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 TRPM8Q7Z2W7 1104 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 BCDIN3DQ7Z5W3 292 aaKnown RBP4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 SNX20Q7Z614 316 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 PIP4P1Q86T03 277 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 ZNF554Q86TJ5 538 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 TMEM173Q86WV6 379 aaPredicted RBP4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 CDK20Q8IZL9 346 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 SLC39A11Q8N1S5 342 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 OR10H4Q8NGA5 316 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 OR4A15Q8NGL6 344 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 NELFBQ8WX92 580 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 ELMO1Q92556 727 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 AKAP1Q92667 903 aaKnown RBP eCLIP4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 REPS1Q96D71 796 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 LINGO1Q96FE5 620 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 ANKRD36BP1Q96IX9 119 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 C4orf36Q96KX1 117 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 B3GALT6Q96L58 329 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 SLITRK1Q96PX8 696 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 PANX3Q96QZ0 392 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 NPAS2Q99743 824 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 SPAG8Q99932 426 aaPredicted RBP4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 SH2D3AQ9BRG2 576 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 NAT9Q9BTE0 207 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 TMEM43Q9BTV4 400 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 HINT2Q9BX68 163 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 CIPCQ9C0C6 399 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 TOLLIPQ9H0E2 274 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 RAB1BQ9H0U4 201 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 TMEM231Q9H6L2 316 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 ADAP2Q9NPF8 381 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 SAMSN1Q9NSI8 373 aaKnown RBP4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 GAR1Q9NY12 217 aaKnown RBP4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 ASIC5Q9NY37 505 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 NYAP2Q9P242 653 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 ENOPH1Q9UHY7 261 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 ERRFI1Q9UJM3 462 aaPredicted RBP4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 NDRG2Q9UN36 371 aaKnown RBP4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 PCDHA12Q9UN75 941 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 NOTCH4Q99466 2003 aa4.7□□□□□ -1.66
ECHDC1-204ENST00000368292 SF3B1O75533 1304 aaKnown RBP eCLIP4.7□□□□□ -1.668e-6■■■■■ 107
ECHDC1-204ENST00000368292 FLNCQ14315 2725 aa4.69□□□□□ -1.66
ECHDC1-204ENST00000368292 AHCTF1Q8WYP5 2266 aa4.69□□□□□ -1.66
ECHDC1-204ENST00000368292 IGKV6D-41A0A0C4DH26 115 aa4.69□□□□□ -1.66
ECHDC1-204ENST00000368292 FAM90A8PA6NJQ4 464 aa4.69□□□□□ -1.66
ECHDC1-204ENST00000368292 LIN7AO14910 233 aaPredicted RBP4.69□□□□□ -1.66
ECHDC1-204ENST00000368292 EIF3HO15372 352 aaKnown RBP eCLIP4.69□□□□□ -1.66
ECHDC1-204ENST00000368292 PLRG1O43660 514 aaKnown RBP4.69□□□□□ -1.66
ECHDC1-204ENST00000368292 KDELR3O43731 214 aa4.69□□□□□ -1.66
ECHDC1-204ENST00000368292 SLC28A2O43868 658 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms