RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 PODNL1Q6PEZ8 512 aa11.94□□□□□ -0.5
VAMP1-201ENST00000361716 TMEM220Q6QAJ8 160 aa11.94□□□□□ -0.5
VAMP1-201ENST00000361716 SLC16A13Q7RTY0 426 aa11.94□□□□□ -0.5
VAMP1-201ENST00000361716 ADAMTS19Q8TE59 1207 aa11.94□□□□□ -0.5
VAMP1-201ENST00000361716 HSD17B8Q92506 261 aa11.94□□□□□ -0.5
VAMP1-201ENST00000361716 GIMAP5Q96F15 307 aa11.94□□□□□ -0.5
VAMP1-201ENST00000361716 SCMH1Q96GD3 660 aa11.94□□□□□ -0.5
VAMP1-201ENST00000361716 WFDC6Q9BQY6 131 aa11.94□□□□□ -0.5
VAMP1-201ENST00000361716 ORAI3Q9BRQ5 295 aa11.94□□□□□ -0.5
VAMP1-201ENST00000361716 LIPT1Q9Y234 373 aa11.94□□□□□ -0.5
VAMP1-201ENST00000361716 RCE1Q9Y256 329 aa11.94□□□□□ -0.5
VAMP1-201ENST00000361716 PLXNA1Q9UIW2 1896 aa11.94□□□□□ -0.5
VAMP1-201ENST00000361716 DISC1C4P0D8 188 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 NEDD8-MDP1E9PL57 170 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 PTP4A3O75365 173 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 LDOC1O95751 146 aaPredicted RBP11.93□□□□□ -0.5
VAMP1-201ENST00000361716 ANKRD34CP0C6C1 535 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 ATP1B2P14415 290 aaPredicted RBP11.93□□□□□ -0.5
VAMP1-201ENST00000361716 NFYAP23511 347 aaPredicted RBP11.93□□□□□ -0.5
VAMP1-201ENST00000361716 ATP5A1P25705 553 aaKnown RBP11.93□□□□□ -0.5
VAMP1-201ENST00000361716 MMP12P39900 470 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 PUM1Q14671 1186 aaKnown RBP eCLIP11.93□□□□□ -0.5
VAMP1-201ENST00000361716 BEX5Q5H9J7 111 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 C3orf38Q5JPI3 329 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 CEACAM19Q7Z692 300 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 KLHL36Q8N4N3 616 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 OXR1Q8N573 874 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 ZNF433Q8N7K0 673 aaPredicted RBP11.93□□□□□ -0.5
VAMP1-201ENST00000361716 ZFPM2Q8WW38 1151 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 CNOT9Q92600 299 aaKnown RBP11.93□□□□□ -0.5
VAMP1-201ENST00000361716 NEIL2Q969S2 332 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 ARSGQ96EG1 525 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 TSNAXQ99598 290 aaKnown RBP11.93□□□□□ -0.5
VAMP1-201ENST00000361716 PLA2G12AQ9BZM1 189 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 TMEM168Q9H0V1 697 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 SLC22A11Q9NSA0 550 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 CHST2Q9Y4C5 530 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 SPTBP11277 2137 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 SLC9B1P1A6NJY1 282 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 F8W036 122 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 H3BSH0 61 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 SDC3O75056 442 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 OR5F1O95221 314 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 WNT1P04628 370 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 IL3P08700 152 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 CKBP12277 381 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 CXCL2P19875 107 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 CD22P20273 847 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 PVALBP20472 110 aaPredicted RBP11.93□□□□□ -0.5
VAMP1-201ENST00000361716 IDSP22304 550 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 SLC1A3P43003 542 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 AP1S1P61966 158 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 SNRPGP62308 76 aaKnown RBP11.93□□□□□ -0.5
VAMP1-201ENST00000361716 SNRPD1P62314 119 aaKnown RBP11.93□□□□□ -0.5
VAMP1-201ENST00000361716 NOGQ13253 232 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 ILKQ13418 452 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 MPEG1Q2M385 716 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 HIST2H2AA3Q6FI13 130 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 LRRC70Q7Z2Q7 622 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 OR8J2Q8NGG1 315 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 WDR20Q8TBZ3 569 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 ZDHHC1Q8WTX9 485 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 COL26A1Q96A83 441 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 TEFMQ96QE5 360 aaKnown RBP11.93□□□□□ -0.5
VAMP1-201ENST00000361716 SLC38A3Q99624 504 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 DPYSL5Q9BPU6 564 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 LDAHQ9H6V9 325 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 ISG20L2Q9H9L3 353 aaKnown RBP11.93□□□□□ -0.5
VAMP1-201ENST00000361716 RPS6KB2Q9UBS0 482 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 FBXW2Q9UKT8 454 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 IRAK3Q9Y616 596 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 LINC00587B1AMM8 73 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 NARSO43776 548 aaKnown RBP11.93□□□□□ -0.5
VAMP1-201ENST00000361716 CD160O95971 181 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 NMBP08949 121 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 ANXA7P20073 488 aaKnown RBP11.93□□□□□ -0.5
VAMP1-201ENST00000361716 MAOBP27338 520 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 GSG1Q2KHT4 349 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 SLC25A35Q3KQZ1 300 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 PGBD2Q6P3X8 592 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 HDDC3Q8N4P3 179 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 TADA1Q96BN2 335 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 TMEM19Q96HH6 336 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 KCNJ15Q99712 375 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 MACROD1Q9BQ69 325 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 EVA1AQ9H8M9 152 aa11.93□□□□□ -0.5
VAMP1-201ENST00000361716 TRBV23-1A0A0A0MS06 115 aa11.92□□□□□ -0.5
VAMP1-201ENST00000361716 MFSD2BA6NFX1 497 aa11.92□□□□□ -0.5
VAMP1-201ENST00000361716 PQBP1O60828 265 aaKnown RBP11.92□□□□□ -0.5
VAMP1-201ENST00000361716 REM1O75628 298 aa11.92□□□□□ -0.5
VAMP1-201ENST00000361716 S100A9P06702 114 aaKnown RBP11.92□□□□□ -0.5
VAMP1-201ENST00000361716 SIM1P81133 766 aaPredicted RBP11.92□□□□□ -0.5
VAMP1-201ENST00000361716 LMAN2Q12907 356 aa11.92□□□□□ -0.5
VAMP1-201ENST00000361716 MTAPQ13126 283 aa11.92□□□□□ -0.5
VAMP1-201ENST00000361716 LRRC37A5PQ49AS3 106 aa11.92□□□□□ -0.5
VAMP1-201ENST00000361716 MED27Q6P2C8 311 aa11.92□□□□□ -0.5
VAMP1-201ENST00000361716 METAP1DQ6UB28 335 aaPredicted RBP11.92□□□□□ -0.5
VAMP1-201ENST00000361716 TMPRSS9Q7Z410 1059 aa11.92□□□□□ -0.5
VAMP1-201ENST00000361716 COMMD6Q7Z4G1 85 aa11.92□□□□□ -0.5
VAMP1-201ENST00000361716 BBS1Q8NFJ9 593 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms