RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 TRPM8Q7Z2W7 1104 aa12.69□□□□□ -0.38
NSMCE1-201ENST00000361439 SERPINA11Q86U17 422 aa12.69□□□□□ -0.38
NSMCE1-201ENST00000361439 ZNF527Q8NB42 609 aa12.69□□□□□ -0.38
NSMCE1-201ENST00000361439 PNPT1Q8TCS8 783 aaKnown RBP12.69□□□□□ -0.38
NSMCE1-201ENST00000361439 RCN3Q96D15 328 aa12.69□□□□□ -0.38
NSMCE1-201ENST00000361439 DTNBP1Q96EV8 351 aa12.69□□□□□ -0.38
NSMCE1-201ENST00000361439 FRMD6Q96NE9 622 aa12.69□□□□□ -0.38
NSMCE1-201ENST00000361439 FAM173AQ9BQD7 235 aa12.69□□□□□ -0.38
NSMCE1-201ENST00000361439 THUMPD3Q9BV44 507 aaKnown RBP12.69□□□□□ -0.38
NSMCE1-201ENST00000361439 KAT8Q9H7Z6 458 aaKnown RBP12.69□□□□□ -0.38
NSMCE1-201ENST00000361439 METTL7AQ9H8H3 244 aa12.69□□□□□ -0.38
NSMCE1-201ENST00000361439 A4GALTQ9NPC4 353 aa12.69□□□□□ -0.38
NSMCE1-201ENST00000361439 CSAG2Q9Y5P2 127 aa12.69□□□□□ -0.38
NSMCE1-201ENST00000361439 KCNE3Q9Y6H6 103 aa12.69□□□□□ -0.38
NSMCE1-201ENST00000361439 CHD6Q8TD26 2715 aa12.68□□□□□ -0.38
NSMCE1-201ENST00000361439 A0A1W2PQD3 144 aa12.68□□□□□ -0.38
NSMCE1-201ENST00000361439 PRAMEF25A6NGN4 478 aa12.68□□□□□ -0.38
NSMCE1-201ENST00000361439 AIM2O14862 343 aa12.68□□□□□ -0.38
NSMCE1-201ENST00000361439 PEX1O43933 1283 aa12.68□□□□□ -0.38
NSMCE1-201ENST00000361439 RASAL1O95294 804 aa12.68□□□□□ -0.38
NSMCE1-201ENST00000361439 IGKV1D-16P01601 117 aa12.68□□□□□ -0.38
NSMCE1-201ENST00000361439 TFPTP0C1Z6 253 aa12.68□□□□□ -0.38
NSMCE1-201ENST00000361439 CYP4B1P13584 511 aa12.68□□□□□ -0.38
NSMCE1-201ENST00000361439 ETFAP13804 333 aa12.68□□□□□ -0.38
NSMCE1-201ENST00000361439 CALB2P22676 271 aa12.68□□□□□ -0.38
NSMCE1-201ENST00000361439 EVI2BP34910 448 aa12.68□□□□□ -0.38
NSMCE1-201ENST00000361439 CRISP3P54108 245 aa12.68□□□□□ -0.38
NSMCE1-201ENST00000361439 NADK2Q4G0N4 442 aa12.68□□□□□ -0.38
NSMCE1-201ENST00000361439 GCNT6Q5T4J0 391 aa12.68□□□□□ -0.38
NSMCE1-201ENST00000361439 C8orf82Q6P1X6 216 aaPredicted RBP12.68□□□□□ -0.38
NSMCE1-201ENST00000361439 FIGNL1Q6PIW4 674 aa12.68□□□□□ -0.38
NSMCE1-201ENST00000361439 GALNTL5Q7Z4T8 443 aa12.68□□□□□ -0.38
NSMCE1-201ENST00000361439 NET1Q7Z628 596 aaPredicted RBP12.68□□□□□ -0.38
NSMCE1-201ENST00000361439 PACS2Q86VP3 889 aa12.68□□□□□ -0.38
NSMCE1-201ENST00000361439 MISPQ8IVT2 679 aa12.68□□□□□ -0.38
NSMCE1-201ENST00000361439 SLC30A8Q8IWU4 369 aa12.68□□□□□ -0.38
NSMCE1-201ENST00000361439 SULF2Q8IWU5 870 aa12.68□□□□□ -0.38
NSMCE1-201ENST00000361439 ZFP62Q8NB50 900 aaPredicted RBP12.68□□□□□ -0.38
NSMCE1-201ENST00000361439 OR5M3Q8NGP4 307 aa12.68□□□□□ -0.38
NSMCE1-201ENST00000361439 RAB8BQ92930 207 aa12.68□□□□□ -0.38
NSMCE1-201ENST00000361439 TMEM41AQ96HV5 264 aa12.68□□□□□ -0.38
NSMCE1-201ENST00000361439 GPATCH1Q9BRR8 931 aaKnown RBP12.68□□□□□ -0.38
NSMCE1-201ENST00000361439 MFRPQ9BY79 579 aa12.68□□□□□ -0.38
NSMCE1-201ENST00000361439 MTHFD2LQ9H903 347 aaPredicted RBP12.68□□□□□ -0.38
NSMCE1-201ENST00000361439 IL1RL2Q9HB29 575 aa12.68□□□□□ -0.38
NSMCE1-201ENST00000361439 SDHAF3Q9NRP4 125 aa12.68□□□□□ -0.38
NSMCE1-201ENST00000361439 KLRF1Q9NZS2 232 aa12.68□□□□□ -0.38
NSMCE1-201ENST00000361439 TNRC6AQ8NDV7 1962 aaKnown RBP12.67□□□□□ -0.38
NSMCE1-201ENST00000361439 BSNQ9UPA5 3926 aa12.67□□□□□ -0.38
NSMCE1-201ENST00000361439 ALG1L2C9J202 215 aa12.67□□□□□ -0.38
NSMCE1-201ENST00000361439 NPIPB9F8W1W9 429 aa12.67□□□□□ -0.38
NSMCE1-201ENST00000361439 KIAA0513O60268 411 aa12.67□□□□□ -0.38
NSMCE1-201ENST00000361439 FADS1O60427 444 aa12.67□□□□□ -0.38
NSMCE1-201ENST00000361439 ICOSLGO75144 302 aa12.67□□□□□ -0.38
NSMCE1-201ENST00000361439 TRIM3O75382 744 aaPredicted RBP12.67□□□□□ -0.38
NSMCE1-201ENST00000361439 UTS2O95399 124 aa12.67□□□□□ -0.38
NSMCE1-201ENST00000361439 CRYABP02511 175 aaKnown RBP12.67□□□□□ -0.38
NSMCE1-201ENST00000361439 NR2F1P10589 423 aa12.67□□□□□ -0.38
NSMCE1-201ENST00000361439 HPGDP15428 266 aa12.67□□□□□ -0.38
NSMCE1-201ENST00000361439 SLC6A2P23975 617 aa12.67□□□□□ -0.38
NSMCE1-201ENST00000361439 ELAVL4P26378 380 aaKnown RBP12.67□□□□□ -0.38
NSMCE1-201ENST00000361439 RFX3P48380 749 aa12.67□□□□□ -0.38
NSMCE1-201ENST00000361439 NUDT2P50583 147 aa12.67□□□□□ -0.38
NSMCE1-201ENST00000361439 ATP12AP54707 1039 aa12.67□□□□□ -0.38
NSMCE1-201ENST00000361439 CASP9P55211 416 aa12.67□□□□□ -0.38
NSMCE1-201ENST00000361439 CAPRIN1Q14444 709 aaKnown RBP12.67□□□□□ -0.38
NSMCE1-201ENST00000361439 ZNF141Q15928 474 aa12.67□□□□□ -0.38
NSMCE1-201ENST00000361439 ZNF630Q2M218 657 aaPredicted RBP12.67□□□□□ -0.38
NSMCE1-201ENST00000361439 HYAL4Q2M3T9 481 aa12.67□□□□□ -0.38
NSMCE1-201ENST00000361439 FLYWCH1Q4VC44 716 aa12.67□□□□□ -0.38
NSMCE1-201ENST00000361439 BNC2Q6ZN30 1099 aaPredicted RBP12.67□□□□□ -0.38
NSMCE1-201ENST00000361439 OR2M7Q8NG81 312 aa12.67□□□□□ -0.38
NSMCE1-201ENST00000361439 GRHL3Q8TE85 626 aa12.67□□□□□ -0.38
NSMCE1-201ENST00000361439 SLC38A5Q8WUX1 472 aa12.67□□□□□ -0.38
NSMCE1-201ENST00000361439 OTUB1Q96FW1 271 aaPredicted RBP12.67□□□□□ -0.38
NSMCE1-201ENST00000361439 NSL1Q96IY1 281 aa12.67□□□□□ -0.38
NSMCE1-201ENST00000361439 NODALQ96S42 347 aa12.67□□□□□ -0.38
NSMCE1-201ENST00000361439 ECSITQ9BQ95 431 aa12.67□□□□□ -0.38
NSMCE1-201ENST00000361439 DOHHQ9BU89 302 aa12.67□□□□□ -0.38
NSMCE1-201ENST00000361439 OSBPL11Q9BXB4 747 aa12.67□□□□□ -0.38
NSMCE1-201ENST00000361439 IKZF5Q9H5V7 419 aa12.67□□□□□ -0.38
NSMCE1-201ENST00000361439 PROK2Q9HC23 129 aa12.67□□□□□ -0.38
NSMCE1-201ENST00000361439 BCL2L10Q9HD36 194 aa12.67□□□□□ -0.38
NSMCE1-201ENST00000361439 KLHL1Q9NR64 748 aa12.67□□□□□ -0.38
NSMCE1-201ENST00000361439 ARL8BQ9NVJ2 186 aa12.67□□□□□ -0.38
NSMCE1-201ENST00000361439 SUCOQ9UBS9 1254 aaKnown RBP12.67□□□□□ -0.38
NSMCE1-201ENST00000361439 PRDM4Q9UKN5 801 aa12.67□□□□□ -0.38
NSMCE1-201ENST00000361439 BOKQ9UMX3 212 aaPredicted RBP12.67□□□□□ -0.38
NSMCE1-201ENST00000361439 WDR45Q9Y484 360 aa12.67□□□□□ -0.38
NSMCE1-201ENST00000361439 COL6A6A6NMZ7 2263 aa12.66□□□□□ -0.38
NSMCE1-201ENST00000361439 A0A0G2JPF8 293 aa12.66□□□□□ -0.38
NSMCE1-201ENST00000361439 HNRNPCL2B2RXH8 293 aa12.66□□□□□ -0.38
NSMCE1-201ENST00000361439 HNRNPCL3B7ZW38 293 aa12.66□□□□□ -0.38
NSMCE1-201ENST00000361439 H3BNH8 94 aa12.66□□□□□ -0.38
NSMCE1-201ENST00000361439 SCDO00767 359 aa12.66□□□□□ -0.38
NSMCE1-201ENST00000361439 HNRNPCL1O60812 293 aaKnown RBP12.66□□□□□ -0.38
NSMCE1-201ENST00000361439 DNAJA2O60884 412 aa12.66□□□□□ -0.38
NSMCE1-201ENST00000361439 H6PDO95479 791 aa12.66□□□□□ -0.38
NSMCE1-201ENST00000361439 C1QCP02747 245 aa12.66□□□□□ -0.38
NSMCE1-201ENST00000361439 HNRNPCL4P0DMR1 293 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms