RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 IL37Q9NZH6 218 aa12.56□□□□□ -0.4
SRGAP3-201ENST00000360413 CSTAP01040 98 aa12.56□□□□□ -0.4
SRGAP3-201ENST00000360413 MBP02144 154 aa12.56□□□□□ -0.4
SRGAP3-201ENST00000360413 GDI1P31150 447 aa12.56□□□□□ -0.4
SRGAP3-201ENST00000360413 APLNRP35414 380 aa12.56□□□□□ -0.4
SRGAP3-201ENST00000360413 WASP42768 502 aa12.56□□□□□ -0.4
SRGAP3-201ENST00000360413 MSS51Q4VC12 460 aa12.56□□□□□ -0.4
SRGAP3-201ENST00000360413 ENPP6Q6UWR7 440 aa12.56□□□□□ -0.4
SRGAP3-201ENST00000360413 OR5M3Q8NGP4 307 aa12.56□□□□□ -0.4
SRGAP3-201ENST00000360413 TFGQ92734 400 aaPredicted RBP12.56□□□□□ -0.4
SRGAP3-201ENST00000360413 FGGYQ96C11 551 aa12.56□□□□□ -0.4
SRGAP3-201ENST00000360413 SGTBQ96EQ0 304 aa12.56□□□□□ -0.4
SRGAP3-201ENST00000360413 SDSLQ96GA7 329 aa12.56□□□□□ -0.4
SRGAP3-201ENST00000360413 PUS1Q9Y606 427 aaKnown RBP eCLIP12.56□□□□□ -0.4
SRGAP3-201ENST00000360413 ABCA1O95477 2261 aa12.56□□□□□ -0.4
SRGAP3-201ENST00000360413 TSPAN6O43657 245 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 GIFP27352 417 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 GCH1P30793 250 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 LRRC73Q5JTD7 316 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 PLD6Q8N2A8 252 aaKnown RBP12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 PITHD1Q9GZP4 211 aaPredicted RBP12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 SLC25A31Q9H0C2 315 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 HLA-DQB2P05538 268 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 SBK2P0C263 348 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 FGF3P11487 239 aaPredicted RBP12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 ZNF33BQ06732 778 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 AGAP7PQ5VUJ5 663 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 AWAT2Q6E213 333 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 APOBEC3HQ6NTF7 200 aaKnown RBP12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 ZNF704Q6ZNC4 412 aaPredicted RBP12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 TXNDC5Q8NBS9 432 aaKnown RBP12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 UHRF1Q96T88 793 aaPredicted RBP12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 KCNIP2Q9NS61 270 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 FAM53CQ9NYF3 392 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 CSF1P09603 554 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 RPS13P62277 151 aaKnown RBP12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 MGAT3Q09327 533 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 ALKAL2Q6UX46 152 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 OR2T4Q8NH00 348 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 MSLNLQ96KJ4 702 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 MCHR1Q99705 422 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 PRTFDC1Q9NRG1 225 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 AKAP6Q13023 2319 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 LOC105369274A0A096LPK9 316 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 SLC16A5O15375 505 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 HPGDSO60760 199 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 PPP3CBP16298 524 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 PROZP22891 400 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 PRSS3P35030 304 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 BEX5Q5H9J7 111 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 ZNF695Q8IW36 515 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 OR4N4Q8N0Y3 316 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 SLC7A13Q8TCU3 470 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 ZMAT5Q9UDW3 170 aaKnown RBP12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 TMEM59LQ9UK28 342 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 TYROBPO43914 113 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 EEF1A1P68104 462 aaKnown RBP12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 EEF1A1P5Q5VTE0 462 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 CILP2Q8IUL8 1156 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 ST8SIA2Q92186 375 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 BSCL2Q96G97 398 aaPredicted RBP12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 LMF1Q96S06 567 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 ADGRB1O14514 1584 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 C11orf98E9PRG8 122 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 NUDT1P36639 197 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 IL13RA1P78552 427 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 GPR176Q14439 515 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 SGCAQ16586 387 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 PROX2Q3B8N5 592 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 RAET1LQ5VY80 246 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 B3GLCTQ6Y288 498 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 OR4N5Q8IXE1 308 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 NCDNQ9UBB6 729 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 GIMAP2Q9UG22 337 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 UNGP13051 313 aaPredicted RBP12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 EPHA1P21709 976 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 GCGRP47871 477 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 PCBD1P61457 104 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 SLAMF1Q13291 335 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 LRFN4Q6PJG9 635 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 PARP16Q8N5Y8 322 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 KRTCAP2Q8N6L1 136 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 OR52H1Q8NGJ2 320 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 PATZ1Q9HBE1 687 aaKnown RBP12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 NPAP1Q9NZP6 1156 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 ATG2BQ96BY7 2078 aa12.55□□□□□ -0.4
SRGAP3-201ENST00000360413 AKAIN1P0CW23 69 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 KITLGP21583 273 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 ARHGAP19Q14CB8 494 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 CHAC2Q8WUX2 184 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 POLHQ9Y253 713 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 TRAV18A0A075B6X5 111 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 WNT7AO00755 349 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 MT-ND4P03905 459 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 GDF5P43026 501 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 MEF2DQ14814 521 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 RAB35Q15286 201 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 LCTLQ6UWM7 567 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 ABHD15Q6UXT9 468 aa12.54□□□□□ -0.4
SRGAP3-201ENST00000360413 OR2A12Q8NGT7 310 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms