RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 MAP3K3Q99759 626 aa17.03■□□□□ 0.32
PDLIM7-203ENST00000359895 GPA33Q99795 319 aa17.03■□□□□ 0.32
PDLIM7-203ENST00000359895 PRR14Q9BWN1 585 aa17.03■□□□□ 0.32
PDLIM7-203ENST00000359895 TEX12Q9BXU0 123 aa17.03■□□□□ 0.32
PDLIM7-203ENST00000359895 CHRNA10Q9GZZ6 450 aa17.03■□□□□ 0.32
PDLIM7-203ENST00000359895 OCEL1Q9H607 264 aa17.03■□□□□ 0.32
PDLIM7-203ENST00000359895 FBXL21Q9UKT6 434 aa17.03■□□□□ 0.32
PDLIM7-203ENST00000359895 PLCL2Q9UPR0 1127 aa17.03■□□□□ 0.32
PDLIM7-203ENST00000359895 IRGMA1A4Y4 181 aa17.02■□□□□ 0.32
PDLIM7-203ENST00000359895 SNTNA6NMZ2 147 aa17.02■□□□□ 0.32
PDLIM7-203ENST00000359895 AQP9O43315 295 aa17.02■□□□□ 0.32
PDLIM7-203ENST00000359895 FMO6PO60774 539 aa17.02■□□□□ 0.32
PDLIM7-203ENST00000359895 NSA2O95478 260 aaKnown RBP17.02■□□□□ 0.32
PDLIM7-203ENST00000359895 NADKO95544 446 aaPredicted RBP17.02■□□□□ 0.32
PDLIM7-203ENST00000359895 CT62P0C5K7 136 aa17.02■□□□□ 0.32
PDLIM7-203ENST00000359895 NID1P14543 1247 aa17.02■□□□□ 0.32
PDLIM7-203ENST00000359895 FPR3P25089 353 aa17.02■□□□□ 0.32
PDLIM7-203ENST00000359895 NCS1P62166 190 aa17.02■□□□□ 0.32
PDLIM7-203ENST00000359895 RHAGQ02094 409 aa17.02■□□□□ 0.32
PDLIM7-203ENST00000359895 RPL6Q02878 288 aaKnown RBP17.02■□□□□ 0.32
PDLIM7-203ENST00000359895 ZNF155Q12901 538 aaPredicted RBP17.02■□□□□ 0.32
PDLIM7-203ENST00000359895 EXOSC7Q15024 291 aaKnown RBP17.02■□□□□ 0.32
PDLIM7-203ENST00000359895 CCNJQ5T5M9 372 aa17.02■□□□□ 0.32
PDLIM7-203ENST00000359895 SLC27A4Q6P1M0 643 aa17.02■□□□□ 0.32
PDLIM7-203ENST00000359895 MBOAT2Q6ZWT7 520 aa17.02■□□□□ 0.32
PDLIM7-203ENST00000359895 KIF18BQ86Y91 864 aa17.02■□□□□ 0.32
PDLIM7-203ENST00000359895 CAMKK1Q8N5S9 505 aa17.02■□□□□ 0.32
PDLIM7-203ENST00000359895 IQCF1Q8N6M8 205 aa17.02■□□□□ 0.32
PDLIM7-203ENST00000359895 WDR36Q8NI36 951 aaKnown RBP17.02■□□□□ 0.32
PDLIM7-203ENST00000359895 ZHX1-C8orf76Q96EF9 292 aa17.02■□□□□ 0.32
PDLIM7-203ENST00000359895 SLC38A2Q96QD8 506 aa17.02■□□□□ 0.32
PDLIM7-203ENST00000359895 TSSK6Q9BXA6 273 aa17.02■□□□□ 0.32
PDLIM7-203ENST00000359895 RAB33BQ9H082 229 aa17.02■□□□□ 0.32
PDLIM7-203ENST00000359895 NLGN3Q9NZ94 848 aa17.02■□□□□ 0.32
PDLIM7-203ENST00000359895 EPHA6Q9UF33 1036 aa17.02■□□□□ 0.32
PDLIM7-203ENST00000359895 A0A0A6YYC8 382 aaPredicted RBP17.02■□□□□ 0.31
PDLIM7-203ENST00000359895 TRAPPC13A5PLN9 417 aa17.02■□□□□ 0.31
PDLIM7-203ENST00000359895 TLCD2A6NGC4 264 aa17.02■□□□□ 0.31
PDLIM7-203ENST00000359895 LMO7DNF2Z398 122 aa17.02■□□□□ 0.31
PDLIM7-203ENST00000359895 I3L1I5 382 aaPredicted RBP17.02■□□□□ 0.31
PDLIM7-203ENST00000359895 CLDN4O14493 209 aa17.02■□□□□ 0.31
PDLIM7-203ENST00000359895 PRKYO43930 277 aa17.02■□□□□ 0.31
PDLIM7-203ENST00000359895 BRINP1O60477 761 aa17.02■□□□□ 0.31
PDLIM7-203ENST00000359895 CTNSO60931 367 aa17.02■□□□□ 0.31
PDLIM7-203ENST00000359895 CBX7O95931 251 aa17.02■□□□□ 0.31
PDLIM7-203ENST00000359895 DBTP11182 482 aaKnown RBP17.02■□□□□ 0.31
PDLIM7-203ENST00000359895 GABRA3P34903 492 aa17.02■□□□□ 0.31
PDLIM7-203ENST00000359895 MLLT3P42568 568 aaPredicted RBP17.02■□□□□ 0.31
PDLIM7-203ENST00000359895 RGS6P49758 472 aa17.02■□□□□ 0.31
PDLIM7-203ENST00000359895 ZNF136P52737 540 aa17.02■□□□□ 0.31
PDLIM7-203ENST00000359895 EPHA4P54764 986 aa17.02■□□□□ 0.31
PDLIM7-203ENST00000359895 IGLV3-21P80748 117 aaPredicted RBP17.02■□□□□ 0.31
PDLIM7-203ENST00000359895 EFNB1P98172 346 aa17.02■□□□□ 0.31
PDLIM7-203ENST00000359895 ZNF91Q05481 1191 aa17.02■□□□□ 0.31
PDLIM7-203ENST00000359895 ZNF846Q147U1 533 aa17.02■□□□□ 0.31
PDLIM7-203ENST00000359895 ZNHIT3Q15649 155 aaPredicted RBP17.02■□□□□ 0.31
PDLIM7-203ENST00000359895 TIMM50Q3ZCQ8 353 aa17.02■□□□□ 0.31
PDLIM7-203ENST00000359895 TCTE1Q5JU00 501 aa17.02■□□□□ 0.31
PDLIM7-203ENST00000359895 PTCRAQ6ISU1 281 aaPredicted RBP17.02■□□□□ 0.31
PDLIM7-203ENST00000359895 ACSM5Q6NUN0 579 aa17.02■□□□□ 0.31
PDLIM7-203ENST00000359895 OGFOD3Q6PK18 319 aa17.02■□□□□ 0.31
PDLIM7-203ENST00000359895 SLC36A4Q6YBV0 504 aa17.02■□□□□ 0.31
PDLIM7-203ENST00000359895 ARHGAP22Q7Z5H3 698 aa17.02■□□□□ 0.31
PDLIM7-203ENST00000359895 GALNT12Q8IXK2 581 aa17.02■□□□□ 0.31
PDLIM7-203ENST00000359895 SPEM1Q8N4L4 309 aa17.02■□□□□ 0.31
PDLIM7-203ENST00000359895 PIK3R3Q92569 461 aa17.02■□□□□ 0.31
PDLIM7-203ENST00000359895 OSTF1Q92882 214 aa17.02■□□□□ 0.31
PDLIM7-203ENST00000359895 FAM46AQ96IP4 442 aaKnown RBP17.02■□□□□ 0.31
PDLIM7-203ENST00000359895 SPACA7Q96KW9 195 aa17.02■□□□□ 0.31
PDLIM7-203ENST00000359895 LMF2Q9BU23 707 aaKnown RBP17.02■□□□□ 0.31
PDLIM7-203ENST00000359895 FOXQ1Q9C009 403 aa17.02■□□□□ 0.31
PDLIM7-203ENST00000359895 MIR1-1HGQ9H1L0 117 aa17.02■□□□□ 0.31
PDLIM7-203ENST00000359895 HMG20AQ9NP66 347 aa17.02■□□□□ 0.31
PDLIM7-203ENST00000359895 ERGIC3Q9Y282 383 aa17.02■□□□□ 0.31
PDLIM7-203ENST00000359895 FOXS1O43638 330 aa17.01■□□□□ 0.31
PDLIM7-203ENST00000359895 TLX2O43763 284 aaPredicted RBP17.01■□□□□ 0.31
PDLIM7-203ENST00000359895 GADD45AP24522 165 aa17.01■□□□□ 0.31
PDLIM7-203ENST00000359895 MAOBP27338 520 aa17.01■□□□□ 0.31
PDLIM7-203ENST00000359895 MLLT10P55197 1068 aa17.01■□□□□ 0.31
PDLIM7-203ENST00000359895 NXPH1P58417 271 aa17.01■□□□□ 0.31
PDLIM7-203ENST00000359895 LSM11P83369 360 aaKnown RBP eCLIP17.01■□□□□ 0.31
PDLIM7-203ENST00000359895 STX4Q12846 297 aa17.01■□□□□ 0.31
PDLIM7-203ENST00000359895 SLC13A2Q13183 592 aa17.01■□□□□ 0.31
PDLIM7-203ENST00000359895 SNAPC1Q16533 368 aa17.01■□□□□ 0.31
PDLIM7-203ENST00000359895 KLHL22Q53GT1 634 aa17.01■□□□□ 0.31
PDLIM7-203ENST00000359895 USP43Q70EL4 1123 aa17.01■□□□□ 0.31
PDLIM7-203ENST00000359895 NKAIN4Q8IVV8 208 aa17.01■□□□□ 0.31
PDLIM7-203ENST00000359895 CYP4Z2PQ8N1L4 340 aa17.01■□□□□ 0.31
PDLIM7-203ENST00000359895 CLDN22Q8N7P3 220 aa17.01■□□□□ 0.31
PDLIM7-203ENST00000359895 KBTBD8Q8NFY9 601 aa17.01■□□□□ 0.31
PDLIM7-203ENST00000359895 OR52R1Q8NGF1 315 aa17.01■□□□□ 0.31
PDLIM7-203ENST00000359895 TMEM163Q8TC26 289 aa17.01■□□□□ 0.31
PDLIM7-203ENST00000359895 RPL3LQ92901 407 aaKnown RBP17.01■□□□□ 0.31
PDLIM7-203ENST00000359895 RBM18Q96H35 190 aaKnown RBP17.01■□□□□ 0.31
PDLIM7-203ENST00000359895 CD180Q99467 661 aa17.01■□□□□ 0.31
PDLIM7-203ENST00000359895 MGLLQ99685 303 aa17.01■□□□□ 0.31
PDLIM7-203ENST00000359895 WDR12Q9GZL7 423 aaKnown RBP17.01■□□□□ 0.31
PDLIM7-203ENST00000359895 PRTFDC1Q9NRG1 225 aa17.01■□□□□ 0.31
PDLIM7-203ENST00000359895 C14orf105Q9NVL8 296 aa17.01■□□□□ 0.31
PDLIM7-203ENST00000359895 OSGIN1Q9UJX0 560 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms