RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 MAGED1Q9Y5V3 778 aaPredicted RBP12.53□□□□□ -0.4
CCDC197-201ENST00000359253 UNC13CQ8NB66 2214 aa12.52□□□□□ -0.41
CCDC197-201ENST00000359253 LOC100130705A0A1B0GUX0 176 aa12.52□□□□□ -0.41
CCDC197-201ENST00000359253 EFCAB7A8K855 629 aa12.52□□□□□ -0.41
CCDC197-201ENST00000359253 AP3D1O14617 1153 aa12.52□□□□□ -0.41
CCDC197-201ENST00000359253 PCDH17O14917 1159 aa12.52□□□□□ -0.41
CCDC197-201ENST00000359253 FMO6PO60774 539 aa12.52□□□□□ -0.41
CCDC197-201ENST00000359253 UGT2B17O75795 530 aa12.52□□□□□ -0.41
CCDC197-201ENST00000359253 KCNK2O95069 426 aa12.52□□□□□ -0.41
CCDC197-201ENST00000359253 NID1P14543 1247 aa12.52□□□□□ -0.41
CCDC197-201ENST00000359253 TNFRSF1BP20333 461 aa12.52□□□□□ -0.41
CCDC197-201ENST00000359253 DRD5P21918 477 aa12.52□□□□□ -0.41
CCDC197-201ENST00000359253 RYKP34925 604 aa12.52□□□□□ -0.41
CCDC197-201ENST00000359253 PIGAP37287 484 aa12.52□□□□□ -0.41
CCDC197-201ENST00000359253 IFNGR2P38484 337 aa12.52□□□□□ -0.41
CCDC197-201ENST00000359253 PPICP45877 212 aa12.52□□□□□ -0.41
CCDC197-201ENST00000359253 NSDHLQ15738 373 aa12.52□□□□□ -0.41
CCDC197-201ENST00000359253 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.52□□□□□ -0.41
CCDC197-201ENST00000359253 PWWP2BQ6NUJ5 590 aa12.52□□□□□ -0.41
CCDC197-201ENST00000359253 TMEM154Q6P9G4 183 aa12.52□□□□□ -0.41
CCDC197-201ENST00000359253 RBM44Q6ZP01 1051 aaKnown RBP12.52□□□□□ -0.41
CCDC197-201ENST00000359253 THAP5Q7Z6K1 395 aa12.52□□□□□ -0.41
CCDC197-201ENST00000359253 GRAMD2AQ8IUY3 354 aa12.52□□□□□ -0.41
CCDC197-201ENST00000359253 CMIPQ8IY22 773 aa12.52□□□□□ -0.41
CCDC197-201ENST00000359253 OFCC1Q8IZS5 231 aa12.52□□□□□ -0.41
CCDC197-201ENST00000359253 C8orf59Q8N0T1 100 aaPredicted RBP12.52□□□□□ -0.41
CCDC197-201ENST00000359253 PARP8Q8N3A8 854 aa12.52□□□□□ -0.41
CCDC197-201ENST00000359253 RCBTB1Q8NDN9 531 aa12.52□□□□□ -0.41
CCDC197-201ENST00000359253 C16orf52Q8NHV5 167 aa12.52□□□□□ -0.41
CCDC197-201ENST00000359253 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.52□□□□□ -0.41
CCDC197-201ENST00000359253 OTUB1Q96FW1 271 aaPredicted RBP12.52□□□□□ -0.41
CCDC197-201ENST00000359253 ZPBPQ9BS86 351 aa12.52□□□□□ -0.41
CCDC197-201ENST00000359253 FNDC11Q9BVV2 318 aa12.52□□□□□ -0.41
CCDC197-201ENST00000359253 STRADBQ9C0K7 418 aa12.52□□□□□ -0.41
CCDC197-201ENST00000359253 PNO1Q9NRX1 252 aaKnown RBP12.52□□□□□ -0.41
CCDC197-201ENST00000359253 RYDENQ9NUL5 291 aaKnown RBP12.52□□□□□ -0.41
CCDC197-201ENST00000359253 COPS7AQ9UBW8 275 aa12.52□□□□□ -0.41
CCDC197-201ENST00000359253 MKLN1Q9UL63 735 aa12.52□□□□□ -0.41
CCDC197-201ENST00000359253 A4GNTQ9UNA3 340 aa12.52□□□□□ -0.41
CCDC197-201ENST00000359253 WASF3Q9UPY6 502 aa12.52□□□□□ -0.41
CCDC197-201ENST00000359253 MGAT4BQ9UQ53 548 aa12.52□□□□□ -0.41
CCDC197-201ENST00000359253 MYRFQ9Y2G1 1151 aa12.52□□□□□ -0.41
CCDC197-201ENST00000359253 GPR55Q9Y2T6 319 aaPredicted RBP12.52□□□□□ -0.41
CCDC197-201ENST00000359253 NUP210LQ5VU65 1888 aa12.51□□□□□ -0.41
CCDC197-201ENST00000359253 MYOCOSA0A1B0GUC4 107 aa12.51□□□□□ -0.41
CCDC197-201ENST00000359253 VSTM2BA6NLU5 285 aa12.51□□□□□ -0.41
CCDC197-201ENST00000359253 HYAL3O43820 417 aaPredicted RBP12.51□□□□□ -0.41
CCDC197-201ENST00000359253 OR5F1O95221 314 aa12.51□□□□□ -0.41
CCDC197-201ENST00000359253 ADAP00813 363 aa12.51□□□□□ -0.41
CCDC197-201ENST00000359253 IGKV3-11P04433 115 aa12.51□□□□□ -0.41
CCDC197-201ENST00000359253 KLK3P07288 261 aaPredicted RBP12.51□□□□□ -0.41
CCDC197-201ENST00000359253 ZGLP1P0C6A0 271 aa12.51□□□□□ -0.41
CCDC197-201ENST00000359253 CCNYL3P0C7X3 344 aa12.51□□□□□ -0.41
CCDC197-201ENST00000359253 UBTFL6P0CB48 400 aaPredicted RBP12.51□□□□□ -0.41
CCDC197-201ENST00000359253 PRKACGP22612 351 aa12.51□□□□□ -0.41
CCDC197-201ENST00000359253 SSTR4P31391 388 aa12.51□□□□□ -0.41
CCDC197-201ENST00000359253 PGDP52209 483 aa12.51□□□□□ -0.41
CCDC197-201ENST00000359253 SLC37A1P57057 533 aa12.51□□□□□ -0.41
CCDC197-201ENST00000359253 EEF1A1P68104 462 aaKnown RBP12.51□□□□□ -0.41
CCDC197-201ENST00000359253 INSM1Q01101 510 aaPredicted RBP12.51□□□□□ -0.41
CCDC197-201ENST00000359253 ST3GAL3Q11203 375 aa12.51□□□□□ -0.41
CCDC197-201ENST00000359253 COX10Q12887 443 aa12.51□□□□□ -0.41
CCDC197-201ENST00000359253 KCNAB2Q13303 367 aa12.51□□□□□ -0.41
CCDC197-201ENST00000359253 TOP3AQ13472 1001 aaPredicted RBP12.51□□□□□ -0.41
CCDC197-201ENST00000359253 GPR68Q15743 365 aa12.51□□□□□ -0.41
CCDC197-201ENST00000359253 ZNF141Q15928 474 aa12.51□□□□□ -0.41
CCDC197-201ENST00000359253 DECR1Q16698 335 aa12.51□□□□□ -0.41
CCDC197-201ENST00000359253 EXOC3L2Q2M3D2 409 aa12.51□□□□□ -0.41
CCDC197-201ENST00000359253 KCTD21Q4G0X4 260 aa12.51□□□□□ -0.41
CCDC197-201ENST00000359253 VWA2Q5GFL6 755 aa12.51□□□□□ -0.41
CCDC197-201ENST00000359253 C1orf189Q5VU69 101 aa12.51□□□□□ -0.41
CCDC197-201ENST00000359253 ZNF385CQ66K41 422 aaPredicted RBP12.51□□□□□ -0.41
CCDC197-201ENST00000359253 DHRS13Q6UX07 377 aa12.51□□□□□ -0.41
CCDC197-201ENST00000359253 DEF8Q6ZN54 512 aa12.51□□□□□ -0.41
CCDC197-201ENST00000359253 COX15Q7KZN9 410 aa12.51□□□□□ -0.41
CCDC197-201ENST00000359253 RANBP3LQ86VV4 465 aaPredicted RBP12.51□□□□□ -0.41
CCDC197-201ENST00000359253 VRK2Q86Y07 508 aa12.51□□□□□ -0.41
CCDC197-201ENST00000359253 HS3ST5Q8IZT8 346 aa12.51□□□□□ -0.41
CCDC197-201ENST00000359253 BMPERQ8N8U9 685 aa12.51□□□□□ -0.41
CCDC197-201ENST00000359253 SIMC1Q8NDZ2 872 aa12.51□□□□□ -0.41
CCDC197-201ENST00000359253 C17orf47Q8NEP4 570 aa12.51□□□□□ -0.41
CCDC197-201ENST00000359253 STT3BQ8TCJ2 826 aa12.51□□□□□ -0.41
CCDC197-201ENST00000359253 METTL21AQ8WXB1 218 aa12.51□□□□□ -0.41
CCDC197-201ENST00000359253 PIK3R3Q92569 461 aa12.51□□□□□ -0.41
CCDC197-201ENST00000359253 RMND5BQ96G75 393 aaPredicted RBP12.51□□□□□ -0.41
CCDC197-201ENST00000359253 CMKLR1Q99788 373 aa12.51□□□□□ -0.41
CCDC197-201ENST00000359253 APOL4Q9BPW4 351 aa12.51□□□□□ -0.41
CCDC197-201ENST00000359253 GABARAPL3Q9BY60 117 aa12.51□□□□□ -0.41
CCDC197-201ENST00000359253 GRIP2Q9C0E4 1043 aa12.51□□□□□ -0.41
CCDC197-201ENST00000359253 VN1R1Q9GZP7 353 aa12.51□□□□□ -0.41
CCDC197-201ENST00000359253 WDR54Q9H977 334 aa12.51□□□□□ -0.41
CCDC197-201ENST00000359253 PAPOLBQ9NRJ5 636 aaKnown RBP12.51□□□□□ -0.41
CCDC197-201ENST00000359253 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.51□□□□□ -0.41
CCDC197-201ENST00000359253 MKL2Q9ULH7 1088 aa12.51□□□□□ -0.41
CCDC197-201ENST00000359253 CBLCQ9ULV8 474 aa12.51□□□□□ -0.41
CCDC197-201ENST00000359253 MSRB2Q9Y3D2 182 aa12.51□□□□□ -0.41
CCDC197-201ENST00000359253 KNTC1P50748 2209 aa12.51□□□□□ -0.41
CCDC197-201ENST00000359253 RP1P56715 2156 aa12.5□□□□□ -0.41
CCDC197-201ENST00000359253 FRG2CA6NGY1 282 aa12.5□□□□□ -0.41
CCDC197-201ENST00000359253 J3KTA2 159 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms