RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 DCLRE1CQ96SD1 692 aaKnown RBP16.52■□□□□ 0.24
GYPC-202ENST00000356887 COQ7Q99807 217 aa16.52■□□□□ 0.24
GYPC-202ENST00000356887 GDF15Q99988 308 aa16.52■□□□□ 0.24
GYPC-202ENST00000356887 ACTRT3Q9BYD9 372 aa16.52■□□□□ 0.24
GYPC-202ENST00000356887 SLC7A5P2Q9GIP4 190 aa16.52■□□□□ 0.24
GYPC-202ENST00000356887 MED17Q9NVC6 651 aa16.52■□□□□ 0.24
GYPC-202ENST00000356887 SPHK1Q9NYA1 384 aa16.52■□□□□ 0.24
GYPC-202ENST00000356887 COMMD3Q9UBI1 195 aa16.52■□□□□ 0.24
GYPC-202ENST00000356887 SERGEFQ9UGK8 458 aa16.52■□□□□ 0.24
GYPC-202ENST00000356887 ZFR2Q9UPR6 939 aaKnown RBP16.52■□□□□ 0.24
GYPC-202ENST00000356887 CASKO14936 926 aa16.52■□□□□ 0.23
GYPC-202ENST00000356887 FCMRO60667 390 aa16.52■□□□□ 0.23
GYPC-202ENST00000356887 HLA-DQB1P01920 261 aa16.52■□□□□ 0.23
GYPC-202ENST00000356887 CEACAM5P06731 702 aa16.52■□□□□ 0.23
GYPC-202ENST00000356887 MYL9P24844 172 aa16.52■□□□□ 0.23
GYPC-202ENST00000356887 APEX1P27695 318 aaKnown RBP16.52■□□□□ 0.23
GYPC-202ENST00000356887 PDGFRLQ15198 375 aa16.52■□□□□ 0.23
GYPC-202ENST00000356887 CST6Q15828 149 aa16.52■□□□□ 0.23
GYPC-202ENST00000356887 C6orf132Q5T0Z8 1188 aa16.52■□□□□ 0.23
GYPC-202ENST00000356887 C16orf62Q7Z3J2 963 aa16.52■□□□□ 0.23
GYPC-202ENST00000356887 GDF7Q7Z4P5 450 aa16.52■□□□□ 0.23
GYPC-202ENST00000356887 TMEM145Q8NBT3 493 aa16.52■□□□□ 0.23
GYPC-202ENST00000356887 ATP6V1C2Q8NEY4 427 aa16.52■□□□□ 0.23
GYPC-202ENST00000356887 KAT2AQ92830 837 aa16.52■□□□□ 0.23
GYPC-202ENST00000356887 FRMD6Q96NE9 622 aa16.52■□□□□ 0.23
GYPC-202ENST00000356887 ATF6BQ99941 703 aa16.52■□□□□ 0.23
GYPC-202ENST00000356887 RNF121Q9H920 327 aa16.52■□□□□ 0.23
GYPC-202ENST00000356887 KLHL28Q9NXS3 571 aa16.52■□□□□ 0.23
GYPC-202ENST00000356887 HCN1O60741 890 aa16.51■□□□□ 0.23
GYPC-202ENST00000356887 IGHA1P01876 353 aa16.51■□□□□ 0.23
GYPC-202ENST00000356887 PDX1P52945 283 aa16.51■□□□□ 0.23
GYPC-202ENST00000356887 ERVK-21P61565 698 aa16.51■□□□□ 0.23
GYPC-202ENST00000356887 LRRC32Q14392 662 aa16.51■□□□□ 0.23
GYPC-202ENST00000356887 CDK10Q15131 360 aa16.51■□□□□ 0.23
GYPC-202ENST00000356887 SHHQ15465 462 aa16.51■□□□□ 0.23
GYPC-202ENST00000356887 LTB4RQ15722 352 aa16.51■□□□□ 0.23
GYPC-202ENST00000356887 PGGHGQ32M88 737 aa16.51■□□□□ 0.23
GYPC-202ENST00000356887 LCN1P1Q5VSP4 162 aa16.51■□□□□ 0.23
GYPC-202ENST00000356887 HEPHL1Q6MZM0 1159 aa16.51■□□□□ 0.23
GYPC-202ENST00000356887 CNIH2Q6PI25 160 aa16.51■□□□□ 0.23
GYPC-202ENST00000356887 METAP1DQ6UB28 335 aaPredicted RBP16.51■□□□□ 0.23
GYPC-202ENST00000356887 PLEKHM3Q6ZWE6 761 aa16.51■□□□□ 0.23
GYPC-202ENST00000356887 MBOAT2Q6ZWT7 520 aa16.51■□□□□ 0.23
GYPC-202ENST00000356887 HDDC3Q8N4P3 179 aa16.51■□□□□ 0.23
GYPC-202ENST00000356887 RNF170Q96K19 258 aa16.51■□□□□ 0.23
GYPC-202ENST00000356887 MCHR1Q99705 422 aa16.51■□□□□ 0.23
GYPC-202ENST00000356887 RSPH9Q9H1X1 276 aaPredicted RBP16.51■□□□□ 0.23
GYPC-202ENST00000356887 NUFIP1Q9UHK0 495 aaKnown RBP16.51■□□□□ 0.23
GYPC-202ENST00000356887 DPP7Q9UHL4 492 aa16.51■□□□□ 0.23
GYPC-202ENST00000356887 ZNF780BQ9Y6R6 833 aa16.51■□□□□ 0.23
GYPC-202ENST00000356887 A0A0B4J293 547 aa16.5■□□□□ 0.23
GYPC-202ENST00000356887 HPGDSO60760 199 aa16.5■□□□□ 0.23
GYPC-202ENST00000356887 CSF2P04141 144 aa16.5■□□□□ 0.23
GYPC-202ENST00000356887 HTR1FP30939 366 aa16.5■□□□□ 0.23
GYPC-202ENST00000356887 WASP42768 502 aa16.5■□□□□ 0.23
GYPC-202ENST00000356887 GPR4P46093 362 aa16.5■□□□□ 0.23
GYPC-202ENST00000356887 RGS8P57771 180 aaPredicted RBP16.5■□□□□ 0.23
GYPC-202ENST00000356887 MADCAM1Q13477 382 aa16.5■□□□□ 0.23
GYPC-202ENST00000356887 ZNF425Q6IV72 752 aa16.5■□□□□ 0.23
GYPC-202ENST00000356887 ZNF620Q6ZNG0 422 aa16.5■□□□□ 0.23
GYPC-202ENST00000356887 NRROSQ86YC3 692 aa16.5■□□□□ 0.23
GYPC-202ENST00000356887 MARCH9Q86YJ5 346 aa16.5■□□□□ 0.23
GYPC-202ENST00000356887 NRMQ8IXM6 262 aa16.5■□□□□ 0.23
GYPC-202ENST00000356887 KLHL36Q8N4N3 616 aa16.5■□□□□ 0.23
GYPC-202ENST00000356887 RNF31Q96EP0 1072 aa16.5■□□□□ 0.23
GYPC-202ENST00000356887 SLC41A3Q96GZ6 507 aa16.5■□□□□ 0.23
GYPC-202ENST00000356887 TMED9Q9BVK6 235 aa16.5■□□□□ 0.23
GYPC-202ENST00000356887 TEX12Q9BXU0 123 aa16.5■□□□□ 0.23
GYPC-202ENST00000356887 HDHD5Q9BXW7 423 aa16.5■□□□□ 0.23
GYPC-202ENST00000356887 CBLCQ9ULV8 474 aa16.5■□□□□ 0.23
GYPC-202ENST00000356887 SLC17A4Q9Y2C5 497 aa16.5■□□□□ 0.23
GYPC-202ENST00000356887 RFXAPO00287 272 aa16.5■□□□□ 0.23
GYPC-202ENST00000356887 AKAP8O43823 692 aaKnown RBP16.5■□□□□ 0.23
GYPC-202ENST00000356887 OR5F1O95221 314 aa16.5■□□□□ 0.23
GYPC-202ENST00000356887 HLA-DPB1P04440 258 aa16.5■□□□□ 0.23
GYPC-202ENST00000356887 ASGR2P07307 311 aa16.5■□□□□ 0.23
GYPC-202ENST00000356887 CMPK1P30085 196 aa16.5■□□□□ 0.23
GYPC-202ENST00000356887 EVX1P49640 407 aa16.5■□□□□ 0.23
GYPC-202ENST00000356887 MRPS15P82914 257 aaKnown RBP16.5■□□□□ 0.23
GYPC-202ENST00000356887 RPE65Q16518 533 aa16.5■□□□□ 0.23
GYPC-202ENST00000356887 C2orf27AQ580R0 203 aa16.5■□□□□ 0.23
GYPC-202ENST00000356887 GALNT12Q8IXK2 581 aa16.5■□□□□ 0.23
GYPC-202ENST00000356887 BBS1Q8NFJ9 593 aa16.5■□□□□ 0.23
GYPC-202ENST00000356887 OR52N1Q8NH53 320 aa16.5■□□□□ 0.23
GYPC-202ENST00000356887 LILRB4Q8NHJ6 448 aa16.5■□□□□ 0.23
GYPC-202ENST00000356887 ADAMTS15Q8TE58 950 aa16.5■□□□□ 0.23
GYPC-202ENST00000356887 SPRYD4Q8WW59 207 aaPredicted RBP16.5■□□□□ 0.23
GYPC-202ENST00000356887 CHFRQ96EP1 664 aa16.5■□□□□ 0.23
GYPC-202ENST00000356887 JAM3Q9BX67 310 aa16.5■□□□□ 0.23
GYPC-202ENST00000356887 C6orf106Q9H6K1 298 aaPredicted RBP16.5■□□□□ 0.23
GYPC-202ENST00000356887 TRIM45Q9H8W5 580 aaPredicted RBP16.5■□□□□ 0.23
GYPC-202ENST00000356887 TBC1D17Q9HA65 648 aa16.5■□□□□ 0.23
GYPC-202ENST00000356887 ASB6Q9NWX5 421 aa16.5■□□□□ 0.23
GYPC-202ENST00000356887 LYARQ9NX58 379 aaKnown RBP16.5■□□□□ 0.23
GYPC-202ENST00000356887 STON1Q9Y6Q2 735 aa16.5■□□□□ 0.23
GYPC-202ENST00000356887 RANBP2P49792 3224 aaKnown RBP16.5■□□□□ 0.23
GYPC-202ENST00000356887 CHD7Q9P2D1 2997 aa16.5■□□□□ 0.23
GYPC-202ENST00000356887 SNRNP200O75643 2136 aaKnown RBP16.49■□□□□ 0.23
GYPC-202ENST00000356887 SHISA3A0PJX4 238 aa16.49■□□□□ 0.23
GYPC-202ENST00000356887 GABRPO00591 440 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms