RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 REEP4Q9H6H4 257 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 TBC1D17Q9HA65 648 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 PCDHGC4Q9Y5F7 938 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 PCDHGA5Q9Y5G8 931 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 PCDHGA1Q9Y5H4 931 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 A0A1W2PPE3 182 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 CARNS1A5YM72 827 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 CLDN4O14493 209 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 PEX10O60683 326 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 ABCD3P28288 659 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 NOS3P29474 1203 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 CCR1P32246 355 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 XCR1P46094 333 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 RBP2P50120 134 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 RAB2AP61019 212 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 MTAPQ13126 283 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 INSL4Q14641 139 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 SF1Q15637 639 aaKnown RBP14.79□□□□□ -0.04
RTN3-205ENST00000356000 XKR6Q5GH73 641 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 TPRA1Q86W33 373 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 OR4L1Q8NH43 312 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 RHOVQ96L33 236 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 PBX4Q9BYU1 374 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 FGF20Q9NP95 211 aaPredicted RBP14.79□□□□□ -0.04
RTN3-205ENST00000356000 OPN4Q9UHM6 478 aa14.79□□□□□ -0.04
RTN3-205ENST00000356000 SCN1AP35498 2009 aa14.78□□□□□ -0.04
RTN3-205ENST00000356000 IGKV6D-21A0A0A0MT36 114 aa14.78□□□□□ -0.04
RTN3-205ENST00000356000 RPP40O75818 363 aaKnown RBP14.78□□□□□ -0.04
RTN3-205ENST00000356000 MOCS2O96007 188 aaPredicted RBP14.78□□□□□ -0.04
RTN3-205ENST00000356000 OR8U8P0C7N1 319 aa14.78□□□□□ -0.04
RTN3-205ENST00000356000 APEHP13798 732 aaKnown RBP14.78□□□□□ -0.04
RTN3-205ENST00000356000 ABOP16442 354 aa14.78□□□□□ -0.04
RTN3-205ENST00000356000 EN2P19622 333 aaPredicted RBP14.78□□□□□ -0.04
RTN3-205ENST00000356000 PSMB1P20618 241 aaKnown RBP14.78□□□□□ -0.04
RTN3-205ENST00000356000 KIR3DL1P43629 444 aa14.78□□□□□ -0.04
RTN3-205ENST00000356000 BLOC1S1P78537 153 aa14.78□□□□□ -0.04
RTN3-205ENST00000356000 PRR5P85299 388 aa14.78□□□□□ -0.04
RTN3-205ENST00000356000 SLC25A30Q5SVS4 291 aa14.78□□□□□ -0.04
RTN3-205ENST00000356000 RPL13AP3Q6NVV1 102 aa14.78□□□□□ -0.04
RTN3-205ENST00000356000 FAM98AQ8NCA5 519 aaKnown RBP14.78□□□□□ -0.04
RTN3-205ENST00000356000 OR10H5Q8NGA6 315 aa14.78□□□□□ -0.04
RTN3-205ENST00000356000 EEF1AKMT1Q8WVE0 214 aa14.78□□□□□ -0.04
RTN3-205ENST00000356000 SLC39A7Q92504 469 aa14.78□□□□□ -0.04
RTN3-205ENST00000356000 EMID1Q96A84 441 aaPredicted RBP14.78□□□□□ -0.04
RTN3-205ENST00000356000 RGMAQ96B86 450 aa14.78□□□□□ -0.04
RTN3-205ENST00000356000 FBXO17Q96EF6 278 aa14.78□□□□□ -0.04
RTN3-205ENST00000356000 IMP4Q96G21 291 aaKnown RBP14.78□□□□□ -0.04
RTN3-205ENST00000356000 ZC3H10Q96K80 434 aaKnown RBP14.78□□□□□ -0.04
RTN3-205ENST00000356000 FAIM2Q9BWQ8 316 aa14.78□□□□□ -0.04
RTN3-205ENST00000356000 SLC39A8Q9C0K1 460 aa14.78□□□□□ -0.04
RTN3-205ENST00000356000 CACYBPQ9HB71 228 aaKnown RBP14.78□□□□□ -0.04
RTN3-205ENST00000356000 MRPS18AQ9NVS2 196 aaKnown RBP14.78□□□□□ -0.04
RTN3-205ENST00000356000 OSER1Q9NX31 292 aa14.78□□□□□ -0.04
RTN3-205ENST00000356000 PEX11BO96011 259 aa14.78□□□□□ -0.04
RTN3-205ENST00000356000 OPN1SWP03999 348 aa14.78□□□□□ -0.04
RTN3-205ENST00000356000 IGFBP1P08833 259 aaPredicted RBP14.78□□□□□ -0.04
RTN3-205ENST00000356000 TXNP10599 105 aaKnown RBP14.78□□□□□ -0.04
RTN3-205ENST00000356000 RPA2P15927 270 aa14.78□□□□□ -0.04
RTN3-205ENST00000356000 MGMTP16455 207 aa14.78□□□□□ -0.04
RTN3-205ENST00000356000 HLA-DPA1P20036 260 aa14.78□□□□□ -0.04
RTN3-205ENST00000356000 AGAP20933 346 aa14.78□□□□□ -0.04
RTN3-205ENST00000356000 TACR1P25103 407 aa14.78□□□□□ -0.04
RTN3-205ENST00000356000 SOX18P35713 384 aa14.78□□□□□ -0.04
RTN3-205ENST00000356000 RAD52P43351 418 aa14.78□□□□□ -0.04
RTN3-205ENST00000356000 PPT1P50897 306 aa14.78□□□□□ -0.04
RTN3-205ENST00000356000 BCL2L1Q07817 233 aa14.78□□□□□ -0.04
RTN3-205ENST00000356000 SLC5A12Q1EHB4 618 aa14.78□□□□□ -0.04
RTN3-205ENST00000356000 RNASE12Q5GAN4 147 aaKnown RBP14.78□□□□□ -0.04
RTN3-205ENST00000356000 ZNF561Q8N587 486 aa14.78□□□□□ -0.04
RTN3-205ENST00000356000 OR51Q1Q8NH59 317 aa14.78□□□□□ -0.04
RTN3-205ENST00000356000 LRR1Q96L50 414 aa14.78□□□□□ -0.04
RTN3-205ENST00000356000 GAS2L1Q99501 681 aaPredicted RBP14.78□□□□□ -0.04
RTN3-205ENST00000356000 TLNRD1Q9H1K6 362 aa14.78□□□□□ -0.04
RTN3-205ENST00000356000 OR10A4Q9H209 315 aa14.78□□□□□ -0.04
RTN3-205ENST00000356000 CTPS2Q9NRF8 586 aa14.78□□□□□ -0.04
RTN3-205ENST00000356000 SEMA3GQ9NS98 782 aa14.78□□□□□ -0.04
RTN3-205ENST00000356000 ASB6Q9NWX5 421 aa14.78□□□□□ -0.04
RTN3-205ENST00000356000 CD8B2A6NJW9 211 aa14.77□□□□□ -0.04
RTN3-205ENST00000356000 IMPA2O14732 288 aa14.77□□□□□ -0.04
RTN3-205ENST00000356000 TCAPO15273 167 aa14.77□□□□□ -0.04
RTN3-205ENST00000356000 PPIHO43447 177 aaKnown RBP14.77□□□□□ -0.04
RTN3-205ENST00000356000 UBL3O95164 117 aa14.77□□□□□ -0.04
RTN3-205ENST00000356000 ADAP00813 363 aa14.77□□□□□ -0.04
RTN3-205ENST00000356000 PRSS56P0CW18 603 aa14.77□□□□□ -0.04
RTN3-205ENST00000356000 CD8BP10966 210 aa14.77□□□□□ -0.04
RTN3-205ENST00000356000 ITGA3P26006 1051 aa14.77□□□□□ -0.04
RTN3-205ENST00000356000 RNF144AP50876 292 aaPredicted RBP14.77□□□□□ -0.04
RTN3-205ENST00000356000 SHC2P98077 582 aa14.77□□□□□ -0.04
RTN3-205ENST00000356000 SIRPB2Q5JXA9 342 aa14.77□□□□□ -0.04
RTN3-205ENST00000356000 FAM69AQ5T7M9 428 aa14.77□□□□□ -0.04
RTN3-205ENST00000356000 ZNF626Q68DY1 528 aa14.77□□□□□ -0.04
RTN3-205ENST00000356000 ZCCHC12Q6PEW1 402 aa14.77□□□□□ -0.04
RTN3-205ENST00000356000 CFAP206Q8IYR0 622 aa14.77□□□□□ -0.04
RTN3-205ENST00000356000 MAL2Q969L2 176 aa14.77□□□□□ -0.04
RTN3-205ENST00000356000 LINGO1Q96FE5 620 aa14.77□□□□□ -0.04
RTN3-205ENST00000356000 C2orf88Q9BSF0 95 aa14.77□□□□□ -0.04
RTN3-205ENST00000356000 FUZQ9BT04 418 aa14.77□□□□□ -0.04
RTN3-205ENST00000356000 FAM117AQ9C073 453 aa14.77□□□□□ -0.04
RTN3-205ENST00000356000 TKTL2Q9H0I9 626 aa14.77□□□□□ -0.04
RTN3-205ENST00000356000 TPT1P8Q9HAU6 139 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms