RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 ZNF35P13682 527 aa13.27□□□□□ -0.29
SREBF1-202ENST00000355815 SLC19A1P41440 591 aa13.27□□□□□ -0.29
SREBF1-202ENST00000355815 PIK3CBP42338 1070 aa13.27□□□□□ -0.29
SREBF1-202ENST00000355815 GCGRP47871 477 aa13.27□□□□□ -0.29
SREBF1-202ENST00000355815 CTBP2P56545 445 aa13.27□□□□□ -0.29
SREBF1-202ENST00000355815 ERVK-21P61565 698 aa13.27□□□□□ -0.29
SREBF1-202ENST00000355815 SELENOWP63302 87 aa13.27□□□□□ -0.29
SREBF1-202ENST00000355815 SLC7A9P82251 487 aa13.27□□□□□ -0.29
SREBF1-202ENST00000355815 ELAVL3Q14576 367 aaKnown RBP13.27□□□□□ -0.29
SREBF1-202ENST00000355815 TMEM69Q5SWH9 247 aa13.27□□□□□ -0.29
SREBF1-202ENST00000355815 SDR16C5Q8N3Y7 309 aa13.27□□□□□ -0.29
SREBF1-202ENST00000355815 DEFB119Q8N690 84 aa13.27□□□□□ -0.29
SREBF1-202ENST00000355815 CYB561A3Q8NBI2 242 aa13.27□□□□□ -0.29
SREBF1-202ENST00000355815 BBS10Q8TAM1 723 aa13.27□□□□□ -0.29
SREBF1-202ENST00000355815 HSPA12BQ96MM6 686 aa13.27□□□□□ -0.29
SREBF1-202ENST00000355815 THAP7Q9BT49 309 aaPredicted RBP13.27□□□□□ -0.29
SREBF1-202ENST00000355815 SLC2A11Q9BYW1 496 aa13.27□□□□□ -0.29
SREBF1-202ENST00000355815 SYNPO2LQ9H987 977 aa13.27□□□□□ -0.29
SREBF1-202ENST00000355815 NDUFAF4Q9P032 175 aa13.27□□□□□ -0.29
SREBF1-202ENST00000355815 TMPRSS11EQ9UL52 423 aa13.27□□□□□ -0.29
SREBF1-202ENST00000355815 METTL15A6NJ78 407 aa13.27□□□□□ -0.29
SREBF1-202ENST00000355815 SERPINA3P01011 423 aa13.27□□□□□ -0.29
SREBF1-202ENST00000355815 GGT2P36268 569 aa13.27□□□□□ -0.29
SREBF1-202ENST00000355815 GRHL2Q6ISB3 625 aa13.27□□□□□ -0.29
SREBF1-202ENST00000355815 HERVK_113Q902F9 699 aa13.27□□□□□ -0.29
SREBF1-202ENST00000355815 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.27□□□□□ -0.29
SREBF1-202ENST00000355815 NDRG2Q9UN36 371 aaKnown RBP13.27□□□□□ -0.29
SREBF1-202ENST00000355815 CSNK1G3Q9Y6M4 447 aa13.27□□□□□ -0.29
SREBF1-202ENST00000355815 PRKCDQ05655 676 aa13.26□□□□□ -0.29
SREBF1-202ENST00000355815 ARFRP1Q13795 201 aa13.26□□□□□ -0.29
SREBF1-202ENST00000355815 UBQLNLQ8IYU4 475 aa13.26□□□□□ -0.29
SREBF1-202ENST00000355815 BEST3Q8N1M1 668 aa13.26□□□□□ -0.29
SREBF1-202ENST00000355815 MRPL43Q8N983 215 aaKnown RBP13.26□□□□□ -0.29
SREBF1-202ENST00000355815 RERGQ96A58 199 aaPredicted RBP13.26□□□□□ -0.29
SREBF1-202ENST00000355815 TRIM2Q9C040 744 aa13.26□□□□□ -0.29
SREBF1-202ENST00000355815 CNIH4Q9P003 139 aa13.26□□□□□ -0.29
SREBF1-202ENST00000355815 CA5BQ9Y2D0 317 aa13.26□□□□□ -0.29
SREBF1-202ENST00000355815 RBM7Q9Y580 266 aaKnown RBP13.26□□□□□ -0.29
SREBF1-202ENST00000355815 FAM183AA6NL82 134 aa13.26□□□□□ -0.29
SREBF1-202ENST00000355815 GFRA2O00451 464 aa13.26□□□□□ -0.29
SREBF1-202ENST00000355815 SIX6O95475 246 aa13.26□□□□□ -0.29
SREBF1-202ENST00000355815 C1orf105O95561 183 aa13.26□□□□□ -0.29
SREBF1-202ENST00000355815 LATS1O95835 1130 aa13.26□□□□□ -0.29
SREBF1-202ENST00000355815 MT-ND5P03915 603 aa13.26□□□□□ -0.29
SREBF1-202ENST00000355815 FOSL1P15407 271 aa13.26□□□□□ -0.29
SREBF1-202ENST00000355815 AQP2P41181 271 aa13.26□□□□□ -0.29
SREBF1-202ENST00000355815 TAP2Q03519 686 aa13.26□□□□□ -0.29
SREBF1-202ENST00000355815 HES5Q5TA89 166 aa13.26□□□□□ -0.29
SREBF1-202ENST00000355815 GRAMD2AQ8IUY3 354 aa13.26□□□□□ -0.29
SREBF1-202ENST00000355815 MSRB3Q8IXL7 192 aa13.26□□□□□ -0.29
SREBF1-202ENST00000355815 NIPSNAP1Q9BPW8 284 aa13.26□□□□□ -0.29
SREBF1-202ENST00000355815 C1QTNF7Q9BXJ2 289 aa13.26□□□□□ -0.29
SREBF1-202ENST00000355815 HOXD1Q9GZZ0 328 aa13.26□□□□□ -0.29
SREBF1-202ENST00000355815 ABCG4Q9H172 646 aa13.26□□□□□ -0.29
SREBF1-202ENST00000355815 RETREG1Q9H6L5 497 aa13.26□□□□□ -0.29
SREBF1-202ENST00000355815 AK6Q9Y3D8 172 aaKnown RBP13.26□□□□□ -0.29
SREBF1-202ENST00000355815 CDH10Q9Y6N8 788 aa13.26□□□□□ -0.29
SREBF1-202ENST00000355815 ANKRD28O15084 1053 aa13.26□□□□□ -0.29
SREBF1-202ENST00000355815 PCDHGA12O60330 932 aa13.26□□□□□ -0.29
SREBF1-202ENST00000355815 SLC25A12O75746 678 aa13.26□□□□□ -0.29
SREBF1-202ENST00000355815 CA3P07451 260 aa13.26□□□□□ -0.29
SREBF1-202ENST00000355815 POLR2CP19387 275 aaPredicted RBP13.26□□□□□ -0.29
SREBF1-202ENST00000355815 CSNK2A2P19784 350 aaPredicted RBP13.26□□□□□ -0.29
SREBF1-202ENST00000355815 SDHBP21912 280 aa13.26□□□□□ -0.29
SREBF1-202ENST00000355815 RBM34P42696 430 aaKnown RBP13.26□□□□□ -0.29
SREBF1-202ENST00000355815 SYPL1Q16563 259 aa13.26□□□□□ -0.29
SREBF1-202ENST00000355815 ZNF750Q32MQ0 723 aa13.26□□□□□ -0.29
SREBF1-202ENST00000355815 MPP7Q5T2T1 576 aa13.26□□□□□ -0.29
SREBF1-202ENST00000355815 C1orf189Q5VU69 101 aa13.26□□□□□ -0.29
SREBF1-202ENST00000355815 RANBP3LQ86VV4 465 aaPredicted RBP13.26□□□□□ -0.29
SREBF1-202ENST00000355815 FCAMRQ8WWV6 532 aa13.26□□□□□ -0.29
SREBF1-202ENST00000355815 ZNF300Q96RE9 604 aaPredicted RBP13.26□□□□□ -0.29
SREBF1-202ENST00000355815 RAD9AQ99638 391 aa13.26□□□□□ -0.29
SREBF1-202ENST00000355815 MYEF2Q9P2K5 600 aaKnown RBP13.26□□□□□ -0.29
SREBF1-202ENST00000355815 CKAP5Q14008 2032 aa13.26□□□□□ -0.29
SREBF1-202ENST00000355815 RLFQ13129 1914 aa13.25□□□□□ -0.29
SREBF1-202ENST00000355815 KAT7O95251 611 aa13.25□□□□□ -0.29
SREBF1-202ENST00000355815 RD3LP0DJH9 198 aa13.25□□□□□ -0.29
SREBF1-202ENST00000355815 ARSBP15848 533 aa13.25□□□□□ -0.29
SREBF1-202ENST00000355815 BMPR1AP36894 532 aa13.25□□□□□ -0.29
SREBF1-202ENST00000355815 SIM1P81133 766 aaPredicted RBP13.25□□□□□ -0.29
SREBF1-202ENST00000355815 TDGQ13569 410 aa13.25□□□□□ -0.29
SREBF1-202ENST00000355815 COX18Q8N8Q8 333 aa13.25□□□□□ -0.29
SREBF1-202ENST00000355815 TRMT10AQ8TBZ6 339 aaKnown RBP13.25□□□□□ -0.29
SREBF1-202ENST00000355815 CCDC107Q8WV48 283 aa13.25□□□□□ -0.29
SREBF1-202ENST00000355815 NXPE3Q969Y0 559 aa13.25□□□□□ -0.29
SREBF1-202ENST00000355815 MCHR1Q99705 422 aa13.25□□□□□ -0.29
SREBF1-202ENST00000355815 SOHLH2Q9NX45 425 aa13.25□□□□□ -0.29
SREBF1-202ENST00000355815 CLDN24A6NM45 220 aa13.25□□□□□ -0.29
SREBF1-202ENST00000355815 PPM1DO15297 605 aa13.25□□□□□ -0.29
SREBF1-202ENST00000355815 HOXC11O43248 304 aaPredicted RBP13.25□□□□□ -0.29
SREBF1-202ENST00000355815 RBBP9O75884 186 aa13.25□□□□□ -0.29
SREBF1-202ENST00000355815 ASGR2P07307 311 aa13.25□□□□□ -0.29
SREBF1-202ENST00000355815 IGFBP1P08833 259 aaPredicted RBP13.25□□□□□ -0.29
SREBF1-202ENST00000355815 GSTM3P21266 225 aa13.25□□□□□ -0.29
SREBF1-202ENST00000355815 OR3A2P47893 321 aa13.25□□□□□ -0.29
SREBF1-202ENST00000355815 CLDN2P57739 230 aa13.25□□□□□ -0.29
SREBF1-202ENST00000355815 RAB5BP61020 215 aa13.25□□□□□ -0.29
SREBF1-202ENST00000355815 C1orf61Q13536 156 aa13.25□□□□□ -0.29
SREBF1-202ENST00000355815 KEAP1Q14145 624 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms