RNA–Protein interactions for RNA: ENST00000355530.6

SPNS3-201, Transcript of sphingolipid transporter 3 (putative), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SPNS3, Length 2,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-201ENST00000355530 B3GAT2Q9NPZ5 323 aa17.06■□□□□ 0.32
SPNS3-201ENST00000355530 PHPT1Q9NRX4 125 aaPredicted RBP17.06■□□□□ 0.32
SPNS3-201ENST00000355530 LYARQ9NX58 379 aaKnown RBP17.06■□□□□ 0.32
SPNS3-201ENST00000355530 MALT1Q9UDY8 824 aa17.06■□□□□ 0.32
SPNS3-201ENST00000355530 KCNK6Q9Y257 313 aa17.06■□□□□ 0.32
SPNS3-201ENST00000355530 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.05■□□□□ 0.32
SPNS3-201ENST00000355530 TBC1D3BA6NDS4 549 aa17.05■□□□□ 0.32
SPNS3-201ENST00000355530 HMGN1P05114 100 aa17.05■□□□□ 0.32
SPNS3-201ENST00000355530 PSKH1P11801 424 aa17.05■□□□□ 0.32
SPNS3-201ENST00000355530 BDH1Q02338 343 aa17.05■□□□□ 0.32
SPNS3-201ENST00000355530 P2RY14Q15391 338 aa17.05■□□□□ 0.32
SPNS3-201ENST00000355530 C6orf132Q5T0Z8 1188 aa17.05■□□□□ 0.32
SPNS3-201ENST00000355530 GDF7Q7Z4P5 450 aa17.05■□□□□ 0.32
SPNS3-201ENST00000355530 GRPEL2Q8TAA5 225 aa17.05■□□□□ 0.32
SPNS3-201ENST00000355530 SPRYD4Q8WW59 207 aaPredicted RBP17.05■□□□□ 0.32
SPNS3-201ENST00000355530 GIMAP5Q96F15 307 aa17.05■□□□□ 0.32
SPNS3-201ENST00000355530 SLC41A3Q96GZ6 507 aa17.05■□□□□ 0.32
SPNS3-201ENST00000355530 MCHR1Q99705 422 aa17.05■□□□□ 0.32
SPNS3-201ENST00000355530 TMEM43Q9BTV4 400 aa17.05■□□□□ 0.32
SPNS3-201ENST00000355530 C11orf49Q9H6J7 331 aa17.05■□□□□ 0.32
SPNS3-201ENST00000355530 ZDHHC4Q9NPG8 344 aa17.05■□□□□ 0.32
SPNS3-201ENST00000355530 PLSCR3Q9NRY6 295 aa17.05■□□□□ 0.32
SPNS3-201ENST00000355530 NLGN3Q9NZ94 848 aa17.05■□□□□ 0.32
SPNS3-201ENST00000355530 BOLA1Q9Y3E2 137 aa17.05■□□□□ 0.32
SPNS3-201ENST00000355530 DUXAA6NLW8 204 aa17.05■□□□□ 0.32
SPNS3-201ENST00000355530 SGK494L7N484 410 aa17.05■□□□□ 0.32
SPNS3-201ENST00000355530 LYRM1O43325 122 aa17.05■□□□□ 0.32
SPNS3-201ENST00000355530 PRICKLE3O43900 615 aaPredicted RBP17.05■□□□□ 0.32
SPNS3-201ENST00000355530 SLC19A2O60779 497 aa17.05■□□□□ 0.32
SPNS3-201ENST00000355530 ALAS2P22557 587 aa17.05■□□□□ 0.32
SPNS3-201ENST00000355530 ATP6V1E1P36543 226 aa17.05■□□□□ 0.32
SPNS3-201ENST00000355530 STXBP1P61764 594 aaKnown RBP17.05■□□□□ 0.32
SPNS3-201ENST00000355530 FAM214AQ32MH5 1076 aa17.05■□□□□ 0.32
SPNS3-201ENST00000355530 YIF1BQ5BJH7 314 aa17.05■□□□□ 0.32
SPNS3-201ENST00000355530 VASNQ6EMK4 673 aa17.05■□□□□ 0.32
SPNS3-201ENST00000355530 HEPHL1Q6MZM0 1159 aa17.05■□□□□ 0.32
SPNS3-201ENST00000355530 ZNF322Q6U7Q0 402 aaPredicted RBP17.05■□□□□ 0.32
SPNS3-201ENST00000355530 ZNF438Q7Z4V0 828 aa17.05■□□□□ 0.32
SPNS3-201ENST00000355530 NRROSQ86YC3 692 aa17.05■□□□□ 0.32
SPNS3-201ENST00000355530 PEX5LQ8IYB4 626 aa17.05■□□□□ 0.32
SPNS3-201ENST00000355530 FBXL6Q8N531 539 aa17.05■□□□□ 0.32
SPNS3-201ENST00000355530 TMEM145Q8NBT3 493 aa17.05■□□□□ 0.32
SPNS3-201ENST00000355530 BBS1Q8NFJ9 593 aa17.05■□□□□ 0.32
SPNS3-201ENST00000355530 SP7Q8TDD2 431 aaPredicted RBP17.05■□□□□ 0.32
SPNS3-201ENST00000355530 OTULINQ96BN8 352 aa17.05■□□□□ 0.32
SPNS3-201ENST00000355530 SECISBP2Q96T21 854 aaKnown RBP17.05■□□□□ 0.32
SPNS3-201ENST00000355530 BEX2Q9BXY8 128 aa17.05■□□□□ 0.32
SPNS3-201ENST00000355530 H2AFY2Q9P0M6 372 aaPredicted RBP17.05■□□□□ 0.32
SPNS3-201ENST00000355530 TNFRSF10DQ9UBN6 386 aa17.05■□□□□ 0.32
SPNS3-201ENST00000355530 CBLCQ9ULV8 474 aa17.05■□□□□ 0.32
SPNS3-201ENST00000355530 MAU2Q9Y6X3 613 aa17.05■□□□□ 0.32
SPNS3-201ENST00000355530 LATO43561 262 aa17.04■□□□□ 0.32
SPNS3-201ENST00000355530 NCR1O76036 304 aa17.04■□□□□ 0.32
SPNS3-201ENST00000355530 ZIC2O95409 532 aaPredicted RBP17.04■□□□□ 0.32
SPNS3-201ENST00000355530 NDUFV2P19404 249 aa17.04■□□□□ 0.32
SPNS3-201ENST00000355530 GCGRP47871 477 aa17.04■□□□□ 0.32
SPNS3-201ENST00000355530 PDX1P52945 283 aa17.04■□□□□ 0.32
SPNS3-201ENST00000355530 RAB8AP61006 207 aa17.04■□□□□ 0.32
SPNS3-201ENST00000355530 SF3A2Q15428 464 aaKnown RBP17.04■□□□□ 0.32
SPNS3-201ENST00000355530 FAM78AQ5JUQ0 283 aa17.04■□□□□ 0.32
SPNS3-201ENST00000355530 EOGTQ5NDL2 527 aa17.04■□□□□ 0.32
SPNS3-201ENST00000355530 CACUL1Q86Y37 369 aa17.04■□□□□ 0.32
SPNS3-201ENST00000355530 LIX1LQ8IVB5 337 aa17.04■□□□□ 0.32
SPNS3-201ENST00000355530 GID4Q8IVV7 300 aa17.04■□□□□ 0.32
SPNS3-201ENST00000355530 MFSD9Q8NBP5 474 aa17.04■□□□□ 0.32
SPNS3-201ENST00000355530 ADAMTS15Q8TE58 950 aa17.04■□□□□ 0.32
SPNS3-201ENST00000355530 TMEM255BQ8WV15 326 aa17.04■□□□□ 0.32
SPNS3-201ENST00000355530 ACOT12Q8WYK0 555 aa17.04■□□□□ 0.32
SPNS3-201ENST00000355530 MS4A4EQ96PG1 132 aa17.04■□□□□ 0.32
SPNS3-201ENST00000355530 KCNJ15Q99712 375 aa17.04■□□□□ 0.32
SPNS3-201ENST00000355530 RNF32Q9H0A6 362 aa17.04■□□□□ 0.32
SPNS3-201ENST00000355530 KCNN2Q9H2S1 579 aa17.04■□□□□ 0.32
SPNS3-201ENST00000355530 CACYBPQ9HB71 228 aaKnown RBP17.04■□□□□ 0.32
SPNS3-201ENST00000355530 THAP10Q9P2Z0 257 aaPredicted RBP17.04■□□□□ 0.32
SPNS3-201ENST00000355530 ZNF443Q9Y2A4 671 aaPredicted RBP17.04■□□□□ 0.32
SPNS3-201ENST00000355530 SNRNP200O75643 2136 aaKnown RBP17.04■□□□□ 0.32
SPNS3-201ENST00000355530 FAM240BA0A1B0GVZ2 78 aa17.03■□□□□ 0.32
SPNS3-201ENST00000355530 SHISA3A0PJX4 238 aa17.03■□□□□ 0.32
SPNS3-201ENST00000355530 MID1O15344 667 aa17.03■□□□□ 0.32
SPNS3-201ENST00000355530 PIP5K1CO60331 668 aa17.03■□□□□ 0.32
SPNS3-201ENST00000355530 AGR2O95994 175 aa17.03■□□□□ 0.32
SPNS3-201ENST00000355530 THY1P04216 161 aa17.03■□□□□ 0.32
SPNS3-201ENST00000355530 FAM157BP0CG42 384 aa17.03■□□□□ 0.32
SPNS3-201ENST00000355530 ERP29P30040 261 aaKnown RBP17.03■□□□□ 0.32
SPNS3-201ENST00000355530 CLDN20P56880 219 aa17.03■□□□□ 0.32
SPNS3-201ENST00000355530 ERVK-21P61565 698 aa17.03■□□□□ 0.32
SPNS3-201ENST00000355530 FRRS1Q6ZNA5 592 aa17.03■□□□□ 0.32
SPNS3-201ENST00000355530 GANCQ8TET4 914 aa17.03■□□□□ 0.32
SPNS3-201ENST00000355530 KAT2AQ92830 837 aa17.03■□□□□ 0.32
SPNS3-201ENST00000355530 APOBEC3BQ9UH17 382 aaKnown RBP17.03■□□□□ 0.32
SPNS3-201ENST00000355530 NTNG1Q9Y2I2 539 aa17.03■□□□□ 0.32
SPNS3-201ENST00000355530 ALG5Q9Y673 324 aa17.03■□□□□ 0.32
SPNS3-201ENST00000355530 MDC1Q14676 2089 aaKnown RBP17.03■□□□□ 0.32
SPNS3-201ENST00000355530 CD8B2A6NJW9 211 aa17.03■□□□□ 0.32
SPNS3-201ENST00000355530 OR52A4PA6NMU1 304 aa17.03■□□□□ 0.32
SPNS3-201ENST00000355530 FCMRO60667 390 aa17.03■□□□□ 0.32
SPNS3-201ENST00000355530 RGS9O75916 674 aaPredicted RBP17.03■□□□□ 0.32
SPNS3-201ENST00000355530 ASGR2P07307 311 aa17.03■□□□□ 0.32
SPNS3-201ENST00000355530 CD8BP10966 210 aa17.03■□□□□ 0.32
SPNS3-201ENST00000355530 CMPK1P30085 196 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms