RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 RPS25P62851 125 aaKnown RBP8.81□□□□□ -1
SMG6-202ENST00000354901 TCEAL5Q5H9L2 206 aa8.81□□□□□ -1
SMG6-202ENST00000354901 HIST2H2AA3Q6FI13 130 aa8.81□□□□□ -1
SMG6-202ENST00000354901 TRIM40Q6P9F5 258 aa8.81□□□□□ -1
SMG6-202ENST00000354901 DEF8Q6ZN54 512 aa8.81□□□□□ -1
SMG6-202ENST00000354901 PGBD3Q8N328 593 aa8.81□□□□□ -1
SMG6-202ENST00000354901 ZNF527Q8NB42 609 aa8.81□□□□□ -1
SMG6-202ENST00000354901 RELL2Q8NC24 303 aaPredicted RBP8.81□□□□□ -1
SMG6-202ENST00000354901 OR52N2Q8NGI0 321 aa8.81□□□□□ -1
SMG6-202ENST00000354901 TEX47Q8TBZ9 253 aa8.81□□□□□ -1
SMG6-202ENST00000354901 PMM1Q92871 262 aa8.81□□□□□ -1
SMG6-202ENST00000354901 WNT2BQ93097 391 aa8.81□□□□□ -1
SMG6-202ENST00000354901 SGK3Q96BR1 496 aa8.81□□□□□ -1
SMG6-202ENST00000354901 TBC1D20Q96BZ9 403 aa8.81□□□□□ -1
SMG6-202ENST00000354901 VWCEQ96DN2 955 aa8.81□□□□□ -1
SMG6-202ENST00000354901 FBXO17Q96EF6 278 aa8.81□□□□□ -1
SMG6-202ENST00000354901 ART5Q96L15 291 aa8.81□□□□□ -1
SMG6-202ENST00000354901 ZFP3Q96NJ6 502 aa8.81□□□□□ -1
SMG6-202ENST00000354901 RBM14Q96PK6 669 aaKnown RBP8.81□□□□□ -1
SMG6-202ENST00000354901 BRF2Q9HAW0 419 aa8.81□□□□□ -1
SMG6-202ENST00000354901 FOLH1BQ9HBA9 442 aa8.81□□□□□ -1
SMG6-202ENST00000354901 PRDM9Q9NQV7 894 aa8.81□□□□□ -1
SMG6-202ENST00000354901 PRMT8Q9NR22 394 aaPredicted RBP8.81□□□□□ -1
SMG6-202ENST00000354901 KCMF1Q9P0J7 381 aa8.81□□□□□ -1
SMG6-202ENST00000354901 SEC14L4Q9UDX3 406 aa8.81□□□□□ -1
SMG6-202ENST00000354901 GPR160Q9UJ42 338 aa8.81□□□□□ -1
SMG6-202ENST00000354901 CORO2BQ9UQ03 480 aa8.81□□□□□ -1
SMG6-202ENST00000354901 POFUT2Q9Y2G5 429 aa8.81□□□□□ -1
SMG6-202ENST00000354901 PCDHGA2Q9Y5H1 932 aa8.81□□□□□ -1
SMG6-202ENST00000354901 PLXND1Q9Y4D7 1925 aa8.81□□□□□ -1
SMG6-202ENST00000354901 TXNL1O43396 289 aa8.81□□□□□ -1
SMG6-202ENST00000354901 PROM1O43490 865 aa8.81□□□□□ -1
SMG6-202ENST00000354901 LY86O95711 162 aa8.81□□□□□ -1
SMG6-202ENST00000354901 RLN2P04090 185 aa8.81□□□□□ -1
SMG6-202ENST00000354901 C1GALT1C1LP0DN25 315 aa8.81□□□□□ -1
SMG6-202ENST00000354901 PCSK2P16519 638 aa8.81□□□□□ -1
SMG6-202ENST00000354901 GIFP27352 417 aa8.81□□□□□ -1
SMG6-202ENST00000354901 TAP2Q03519 686 aa8.81□□□□□ -1
SMG6-202ENST00000354901 MELKQ14680 651 aa8.81□□□□□ -1
SMG6-202ENST00000354901 NCF4Q15080 339 aa8.81□□□□□ -1
SMG6-202ENST00000354901 Q3ZCU0 254 aa8.81□□□□□ -1
SMG6-202ENST00000354901 ZNF805Q5CZA5 627 aa8.81□□□□□ -1
SMG6-202ENST00000354901 IDNKQ5T6J7 187 aa8.81□□□□□ -1
SMG6-202ENST00000354901 VASNQ6EMK4 673 aa8.81□□□□□ -1
SMG6-202ENST00000354901 HAGHLQ6PII5 290 aaPredicted RBP8.81□□□□□ -1
SMG6-202ENST00000354901 CEACAM20Q6UY09 585 aa8.81□□□□□ -1
SMG6-202ENST00000354901 MEX3DQ86XN8 651 aaKnown RBP8.81□□□□□ -1
SMG6-202ENST00000354901 RBM45Q8IUH3 476 aaKnown RBP8.81□□□□□ -1
SMG6-202ENST00000354901 ZNF454Q8N9F8 522 aa8.81□□□□□ -1
SMG6-202ENST00000354901 ADAMTS14Q8WXS8 1223 aa8.81□□□□□ -1
SMG6-202ENST00000354901 POP5Q969H6 163 aaKnown RBP8.81□□□□□ -1
SMG6-202ENST00000354901 EXOSC8Q96B26 276 aaKnown RBP8.81□□□□□ -1
SMG6-202ENST00000354901 TIFAQ96CG3 184 aa8.81□□□□□ -1
SMG6-202ENST00000354901 KCTD7Q96MP8 289 aa8.81□□□□□ -1
SMG6-202ENST00000354901 DPH7Q9BTV6 452 aa8.81□□□□□ -1
SMG6-202ENST00000354901 GABARAPL3Q9BY60 117 aa8.81□□□□□ -1
SMG6-202ENST00000354901 NLNQ9BYT8 704 aa8.81□□□□□ -1
SMG6-202ENST00000354901 TMEM168Q9H0V1 697 aa8.81□□□□□ -1
SMG6-202ENST00000354901 LDAHQ9H6V9 325 aa8.81□□□□□ -1
SMG6-202ENST00000354901 ENAMQ9NRM1 1142 aa8.81□□□□□ -1
SMG6-202ENST00000354901 C1GALT1Q9NS00 363 aa8.81□□□□□ -1
SMG6-202ENST00000354901 ACER3Q9NUN7 267 aa8.81□□□□□ -1
SMG6-202ENST00000354901 NLGN3Q9NZ94 848 aa8.81□□□□□ -1
SMG6-202ENST00000354901 SNX11Q9Y5W9 270 aa8.81□□□□□ -1
SMG6-202ENST00000354901 SLC22A7Q9Y694 548 aa8.81□□□□□ -1
SMG6-202ENST00000354901 HELZP42694 1942 aaKnown RBP8.81□□□□□ -1
SMG6-202ENST00000354901 TRBV4-1A0A0J9YWV2 114 aa8.81□□□□□ -1
SMG6-202ENST00000354901 FEZF1A0PJY2 475 aa8.81□□□□□ -1
SMG6-202ENST00000354901 POM121BA6NF01 834 aa8.81□□□□□ -1
SMG6-202ENST00000354901 WASH3PC4AMC7 463 aa8.81□□□□□ -1
SMG6-202ENST00000354901 TRIM3O75382 744 aaPredicted RBP8.81□□□□□ -1
SMG6-202ENST00000354901 POP7O75817 140 aaKnown RBP8.81□□□□□ -1
SMG6-202ENST00000354901 ALPPL2P10696 532 aa8.81□□□□□ -1
SMG6-202ENST00000354901 ITGB8P26012 769 aa8.81□□□□□ -1
SMG6-202ENST00000354901 HTRA3P83110 453 aa8.81□□□□□ -1
SMG6-202ENST00000354901 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.81□□□□□ -1
SMG6-202ENST00000354901 RRM2BQ7LG56 351 aa8.81□□□□□ -1
SMG6-202ENST00000354901 ADCK2Q7Z695 626 aa8.81□□□□□ -1
SMG6-202ENST00000354901 OR5AR1Q8NGP9 310 aa8.81□□□□□ -1
SMG6-202ENST00000354901 UCN3Q969E3 161 aa8.81□□□□□ -1
SMG6-202ENST00000354901 F2RL3Q96RI0 385 aa8.81□□□□□ -1
SMG6-202ENST00000354901 SIGLEC11Q96RL6 698 aa8.81□□□□□ -1
SMG6-202ENST00000354901 C19orf43Q9BQ61 176 aa8.81□□□□□ -1
SMG6-202ENST00000354901 QRSL1Q9H0R6 528 aaKnown RBP8.81□□□□□ -1
SMG6-202ENST00000354901 CXorf36Q9H7Y0 433 aa8.81□□□□□ -1
SMG6-202ENST00000354901 MRTO4Q9UKD2 239 aaKnown RBP8.81□□□□□ -1
SMG6-202ENST00000354901 FKBP7Q9Y680 259 aa8.81□□□□□ -1
SMG6-202ENST00000354901 NOTCH4Q99466 2003 aa8.8□□□□□ -1
SMG6-202ENST00000354901 NPIPB8E9PQR5 432 aa8.8□□□□□ -1
SMG6-202ENST00000354901 SCAMP1O15126 338 aa8.8□□□□□ -1
SMG6-202ENST00000354901 OR10H3O60404 316 aa8.8□□□□□ -1
SMG6-202ENST00000354901 GPR37L1O60883 481 aa8.8□□□□□ -1
SMG6-202ENST00000354901 ADH1AP07327 375 aa8.8□□□□□ -1
SMG6-202ENST00000354901 CD3GP09693 182 aa8.8□□□□□ -1
SMG6-202ENST00000354901 HSD3B1P14060 373 aa8.8□□□□□ -1
SMG6-202ENST00000354901 HSD3B2P26439 372 aa8.8□□□□□ -1
SMG6-202ENST00000354901 PSMB5P28074 263 aa8.8□□□□□ -1
SMG6-202ENST00000354901 HSD17B2P37059 387 aa8.8□□□□□ -1
SMG6-202ENST00000354901 CSNK2BP67870 215 aa8.8□□□□□ -1
SMG6-202ENST00000354901 ADAM15Q13444 863 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms