RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 TAF12Q16514 161 aa9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 SLC5A12Q1EHB4 618 aa9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 METTL11BQ5VVY1 283 aa9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 SLC30A6Q6NXT4 461 aa9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 B3GLCTQ6Y288 498 aa9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 TSPAN33Q86UF1 283 aa9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 FBXO15Q8NCQ5 510 aaPredicted RBP9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 OR4K1Q8NGD4 311 aa9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 OR1S1Q8NH92 325 aa9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 HAVCR2Q8TDQ0 301 aa9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 BCL7CQ8WUZ0 217 aaPredicted RBP9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 CNOT9Q92600 299 aaKnown RBP9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 FOXJ1Q92949 421 aa9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 WBP2Q969T9 261 aa9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 MTERF1Q99551 399 aaKnown RBP9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 SLC38A3Q99624 504 aa9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 ZNF649Q9BS31 505 aa9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 JAM3Q9BX67 310 aa9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 BTBD1Q9H0C5 482 aa9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 SUV39H2Q9H5I1 410 aa9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 BRD9Q9H8M2 597 aa9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 MYNNQ9NPC7 610 aa9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 ACTR10Q9NZ32 417 aa9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 OR6C2Q9NZP2 312 aa9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 PIPOXQ9P0Z9 390 aa9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 ACSL6Q9UKU0 697 aa9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 CA5BQ9Y2D0 317 aa9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 CHST2Q9Y4C5 530 aa9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 MAP4K5Q9Y4K4 846 aa9.69□□□□□ -0.86
CHRNA1-202ENST00000348749 A0A1B0GUH1 482 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 GNG14A0A1W2PPG7 69 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 FAM74A7A6NL05 159 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 E7EQ34 232 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 GSTZ1O43708 216 aaPredicted RBP9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 GREM1O60565 184 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 GALR3O60755 368 aaPredicted RBP9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 FZD7O75084 574 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 ZNF821O75541 412 aaPredicted RBP9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 RP2O75695 350 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 FGF18O76093 207 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 UBL3O95164 117 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 EFEMP2O95967 443 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 CPN1P15169 458 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 FOSL1P15407 271 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 PPP3CBP16298 524 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 ZNF8P17098 575 aaPredicted RBP9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 MMP11P24347 488 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 ATP5A1P25705 553 aaKnown RBP9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 MEOX2P50222 304 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 POLR2LP62875 67 aaKnown RBP9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 HTRA3P83110 453 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 KLF9Q13886 244 aaPredicted RBP9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 TMEM44Q2T9K0 475 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 FAM74A3Q4VXF1 159 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 ENTPD8Q5MY95 495 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 SLC27A4Q6P1M0 643 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 MED27Q6P2C8 311 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 AGTRAPQ6RW13 159 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 IL20RBQ6UXL0 311 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 LHFPL3Q86UP9 236 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 TPRA1Q86W33 373 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 VRK3Q8IV63 474 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 PDZD9Q8IXQ8 264 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 APCDD1Q8J025 514 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 ZNF454Q8N9F8 522 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 CAMKVQ8NCB2 501 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 FIBINQ8TAL6 211 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 SLC7A13Q8TCU3 470 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 YIPF4Q9BSR8 244 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 FAIM2Q9BWQ8 316 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 ATG10Q9H0Y0 220 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 EVA1AQ9H8M9 152 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 NLGN3Q9NZ94 848 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 SEC14L3Q9UDX4 400 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 GPR160Q9UJ42 338 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 LSM7Q9UK45 103 aaKnown RBP9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 ICKQ9UPZ9 632 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 EXOGQ9Y2C4 368 aaKnown RBP9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 COL4A6Q14031 1691 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 CASP8AP2Q9UKL3 1982 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 A0A1W2PRQ8 180 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 OR2M5A3KFT3 312 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 ANXA2P2A6NMY6 339 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 H7C2Y5 167 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 CTDSPLO15194 276 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 RNF13O43567 381 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 SUSD5O60279 629 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 SDC3O75056 442 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 ABLIM3O94929 683 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 OR2A4O95047 310 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 ETHE1O95571 254 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 OLFM2O95897 454 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 CBX7O95931 251 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 IGHA1P01876 353 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 APOC3P02656 99 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 EPHX1P07099 455 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 CD3GP09693 182 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 FURINP09958 794 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 GABRA1P14867 456 aa9.68□□□□□ -0.86
CHRNA1-202ENST00000348749 GSTM3P21266 225 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms