RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 CRHBPP24387 322 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 RYKP34925 604 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 GABRA4P48169 554 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 GSSP48637 474 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 HLCSP50747 726 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 HMGA2P52926 109 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 PDX1P52945 283 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 RAB38P57729 211 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 MAT1AQ00266 395 aaKnown RBP8.6□□□□□ -1.03
ATG4A-202ENST00000345734 PIGFQ07326 219 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 NPRL3Q12980 569 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 IL18R1Q13478 541 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 TUBA3CQ13748 450 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 KCNAB1Q14722 419 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 FHL5Q5TD97 284 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 B3GNT6Q6ZMB0 384 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 DGAT2L6Q6ZPD8 337 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 TSPYL5Q86VY4 417 aaPredicted RBP8.6□□□□□ -1.03
ATG4A-202ENST00000345734 CCDC71Q8IV32 467 aaPredicted RBP8.6□□□□□ -1.03
ATG4A-202ENST00000345734 METTL27Q8N6F8 245 aaPredicted RBP8.6□□□□□ -1.03
ATG4A-202ENST00000345734 MAFAQ8NHW3 353 aaPredicted RBP8.6□□□□□ -1.03
ATG4A-202ENST00000345734 ADAMTS15Q8TE58 950 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 PHF10Q8WUB8 498 aaKnown RBP8.6□□□□□ -1.03
ATG4A-202ENST00000345734 GAB3Q8WWW8 586 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 SLC9A6Q92581 669 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 HDAC2Q92769 488 aaKnown RBP8.6□□□□□ -1.03
ATG4A-202ENST00000345734 CDS1Q92903 461 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 UBE2FQ969M7 185 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 ALPK1Q96QP1 1244 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 NPLQ9BXD5 320 aaPredicted RBP8.6□□□□□ -1.03
ATG4A-202ENST00000345734 NDEL1Q9GZM8 345 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 RBM38Q9H0Z9 239 aaKnown RBP8.6□□□□□ -1.03
ATG4A-202ENST00000345734 SLC38A1Q9H2H9 487 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 NMNAT1Q9HAN9 279 aaPredicted RBP8.6□□□□□ -1.03
ATG4A-202ENST00000345734 SOHLH2Q9NX45 425 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 GIN1Q9NXP7 522 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 NDRG4Q9ULP0 352 aaKnown RBP8.6□□□□□ -1.03
ATG4A-202ENST00000345734 OR2W5A6NFC9 320 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 TLCD2A6NGC4 264 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 FAM47E-STBD1D6RA91 191 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 E9PQ18 207 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 BOLA2-SMG1P6H3BVE0 249 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 ASNA1O43681 348 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 FCMRO60667 390 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 SRPX2O60687 465 aaPredicted RBP8.6□□□□□ -1.03
ATG4A-202ENST00000345734 CDC123O75794 336 aaPredicted RBP8.6□□□□□ -1.03
ATG4A-202ENST00000345734 GIMD1P0DJR0 217 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 ACP2P11117 423 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 CDH2P19022 906 aaPredicted RBP8.6□□□□□ -1.03
ATG4A-202ENST00000345734 EEF1B2P24534 225 aaKnown RBP8.6□□□□□ -1.03
ATG4A-202ENST00000345734 FMO3P31513 532 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 RPP38P78345 283 aaKnown RBP8.6□□□□□ -1.03
ATG4A-202ENST00000345734 BNC1Q01954 994 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 CFHR1Q03591 330 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 MGAT2Q10469 447 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 CDK5R2Q13319 367 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 KEAP1Q14145 624 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 ERV3-1Q14264 604 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 EXOSC7Q15024 291 aaKnown RBP8.6□□□□□ -1.03
ATG4A-202ENST00000345734 SEC23BQ15437 767 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 SHBQ15464 509 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 DUSP5Q16690 384 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 SYT16Q17RD7 645 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 FAM214AQ32MH5 1076 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 AMZ1Q400G9 498 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 RBM48Q5RL73 367 aaKnown RBP8.6□□□□□ -1.03
ATG4A-202ENST00000345734 ZNF385CQ66K41 422 aaPredicted RBP8.6□□□□□ -1.03
ATG4A-202ENST00000345734 CDC73Q6P1J9 531 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 FDX2Q6P4F2 183 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 C16orf62Q7Z3J2 963 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 VRK2Q86Y07 508 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 MRPL41Q8IXM3 137 aaKnown RBP8.6□□□□□ -1.03
ATG4A-202ENST00000345734 SLC35F3Q8IY50 421 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 FBLIM1Q8WUP2 373 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 RASSF5Q8WWW0 418 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 TANKQ92844 425 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 DGCR14Q96DF8 476 aaKnown RBP8.6□□□□□ -1.03
ATG4A-202ENST00000345734 PEX11GQ96HA9 241 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 GABARAPL3Q9BY60 117 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 SPRTNQ9H040 489 aaPredicted RBP8.6□□□□□ -1.03
ATG4A-202ENST00000345734 ADAP2Q9NPF8 381 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 PTGFRNQ9P2B2 879 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 C19orf53Q9UNZ5 99 aaPredicted RBP8.6□□□□□ -1.03
ATG4A-202ENST00000345734 CEPT1Q9Y6K0 416 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 TNRC6BQ9UPQ9 1833 aaKnown RBP8.6□□□□□ -1.03
ATG4A-202ENST00000345734 ADAMTS9Q9P2N4 1935 aa8.6□□□□□ -1.03
ATG4A-202ENST00000345734 NCOR1O75376 2440 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 TECTAO75443 2155 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 CCDC160A6NGH7 325 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 FAM25EA8MYX2 175 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 SLC1A7O00341 560 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 FRS3O43559 492 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 IDH3BO43837 385 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 XPNPEP2O43895 674 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 CCNB2O95067 398 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 OXSR1O95747 527 aaPredicted RBP8.59□□□□□ -1.03
ATG4A-202ENST00000345734 LGI1O95970 557 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 GASTP01350 101 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 ATP1B1P05026 303 aa8.59□□□□□ -1.03
ATG4A-202ENST00000345734 ANXA8P13928 327 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms