RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 MRPL15Q9P015 296 aaKnown RBP3.58□□□□□ -1.84
SYNE2-202ENST00000344113 A0A087X0T9 212 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 G3V3Y1 287 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 AP4M1O00189 453 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 CACNG3O60359 315 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 LY86O95711 162 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 CBLP22681 906 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 F2RP25116 425 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 RBMXP38159 391 aaKnown RBP3.58□□□□□ -1.84
SYNE2-202ENST00000344113 GRIN2CQ14957 1233 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 ZNF667Q5HYK9 610 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 OR4K1Q8NGD4 311 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 OR8J1Q8NGP2 316 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 STACQ99469 402 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 OPTCQ9UBM4 332 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 KIAA1024Q9UPX6 916 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 CROCC2H7BZ55 1655 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 SHMT2P34897 504 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 EPHX2P34913 555 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 DRAM2Q6UX65 266 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 IRF2BP2Q7Z5L9 587 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 NRSN2Q9GZP1 204 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 AHSGP02765 367 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 FGRP09769 529 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 ZNF154Q13106 437 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 INAVAQ3KP66 663 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 GCNT6Q5T4J0 391 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 KIAA0930Q6ICG6 404 aaPredicted RBP3.58□□□□□ -1.84
SYNE2-202ENST00000344113 PNLDC1Q8NA58 520 aaKnown RBP3.58□□□□□ -1.84
SYNE2-202ENST00000344113 MFRPQ9BY79 579 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 NEUROD4Q9HD90 331 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 POLLQ9UGP5 575 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 GPSM3Q9Y4H4 160 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 TBC1D3KA0A087X1G2 549 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 OR6C75A6NL08 312 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 NUPL2O15504 423 aaKnown RBP3.58□□□□□ -1.84
SYNE2-202ENST00000344113 KLK1P06870 262 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 NCK1P16333 377 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 EIF2B1Q14232 305 aaKnown RBP3.58□□□□□ -1.84
SYNE2-202ENST00000344113 PRSS58Q8IYP2 241 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 UBL7Q96S82 380 aaPredicted RBP3.58□□□□□ -1.84
SYNE2-202ENST00000344113 SLC35A5Q9BS91 424 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 COL25A1Q9BXS0 654 aaPredicted RBP3.58□□□□□ -1.84
SYNE2-202ENST00000344113 SUV39H2Q9H5I1 410 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 USP22Q9UPT9 525 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 ENTPD2Q9Y5L3 495 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 THY1P04216 161 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 TP53P04637 393 aaPredicted RBP3.58□□□□□ -1.84
SYNE2-202ENST00000344113 FREM3P0C091 2139 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 NTSP30990 170 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 HBG1P69891 147 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 HBG2P69892 147 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 DESI1Q6ICB0 168 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 TOMM20LQ6UXN7 152 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 GALNT5Q7Z7M9 940 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 TMC8Q8IU68 726 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 MS4A15Q8N5U1 240 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 OR5M9Q8NGP3 310 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 OR5M8Q8NGP6 311 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 TEAD3Q99594 435 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 TMLHEQ9NVH6 421 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 TRMT112Q9UI30 125 aaKnown RBP3.58□□□□□ -1.84
SYNE2-202ENST00000344113 WASH3PC4AMC7 463 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 M0R1X1 148 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 BDKRB1P46663 353 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 RPL21P46778 160 aaKnown RBP3.58□□□□□ -1.84
SYNE2-202ENST00000344113 OVGP1Q12889 678 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 TMEM69Q5SWH9 247 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 OR52N4Q8NGI2 321 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 SFRP2Q96HF1 295 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 ARHGDIGQ99819 225 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 CDCA4Q9BXL8 241 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 MID1IP1Q9NPA3 183 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 SLC2A8Q9NY64 477 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 PCDHB14Q9Y5E9 798 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 J3QRK9 145 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 FPR1P21462 350 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 ANTXR2P58335 489 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 DUSP4Q13115 394 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 GRM3Q14832 879 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 GLRX5Q86SX6 157 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 UBAC2Q8NBM4 344 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 OR5M3Q8NGP4 307 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 FBXL8Q96CD0 374 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 ST6GAL2Q96JF0 529 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 SEC22BO75396 215 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 SCO1O75880 301 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 OR8U9P0C7N5 309 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 NTF3P20783 257 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 EPHA1P21709 976 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 OMGP23515 440 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 SOX18P35713 384 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 SULT1A1P50225 295 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 BST1Q10588 318 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 MLC1Q15049 377 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 EDAQ92838 391 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 SLC22A13Q9Y226 551 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 TGM5O43548 720 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 FGF2P09038 288 aa3.57□□□□□ -1.84
SYNE2-202ENST00000344113 IDH3AP50213 366 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms