RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 CCL7P80098 99 aa20.82■□□□□ 0.92
PDLIM2-203ENST00000339162 XAF1Q6GPH4 301 aa20.82■□□□□ 0.92
PDLIM2-203ENST00000339162 ZER1Q7Z7L7 766 aa20.82■□□□□ 0.92
PDLIM2-203ENST00000339162 CCDC103Q8IW40 242 aa20.82■□□□□ 0.92
PDLIM2-203ENST00000339162 MORN4Q8NDC4 146 aa20.82■□□□□ 0.92
PDLIM2-203ENST00000339162 TSLPQ969D9 159 aa20.82■□□□□ 0.92
PDLIM2-203ENST00000339162 ZNF501Q96CX3 271 aaPredicted RBP20.82■□□□□ 0.92
PDLIM2-203ENST00000339162 VSTM2LQ96N03 204 aa20.82■□□□□ 0.92
PDLIM2-203ENST00000339162 MCHR1Q99705 422 aa20.82■□□□□ 0.92
PDLIM2-203ENST00000339162 GPA33Q99795 319 aa20.82■□□□□ 0.92
PDLIM2-203ENST00000339162 ERVK-18Q9QC07 812 aa20.82■□□□□ 0.92
PDLIM2-203ENST00000339162 SERTAD3Q9UJW9 196 aa20.82■□□□□ 0.92
PDLIM2-203ENST00000339162 MGAT4BQ9UQ53 548 aa20.82■□□□□ 0.92
PDLIM2-203ENST00000339162 BLACEA4D250 179 aa20.82■□□□□ 0.92
PDLIM2-203ENST00000339162 KIAA0513O60268 411 aa20.82■□□□□ 0.92
PDLIM2-203ENST00000339162 CYP7B1O75881 506 aa20.82■□□□□ 0.92
PDLIM2-203ENST00000339162 MMP11P24347 488 aa20.82■□□□□ 0.92
PDLIM2-203ENST00000339162 EMP3P54852 163 aa20.82■□□□□ 0.92
PDLIM2-203ENST00000339162 UGT2B15P54855 530 aa20.82■□□□□ 0.92
PDLIM2-203ENST00000339162 GABARAPL2P60520 117 aa20.82■□□□□ 0.92
PDLIM2-203ENST00000339162 PROX2Q3B8N5 592 aa20.82■□□□□ 0.92
PDLIM2-203ENST00000339162 VWA2Q5GFL6 755 aa20.82■□□□□ 0.92
PDLIM2-203ENST00000339162 MRPL2Q5T653 305 aaKnown RBP20.82■□□□□ 0.92
PDLIM2-203ENST00000339162 TMEM71Q6P5X7 295 aa20.82■□□□□ 0.92
PDLIM2-203ENST00000339162 C11orf74Q86VG3 221 aa20.82■□□□□ 0.92
PDLIM2-203ENST00000339162 DIO2Q92813 273 aa20.82■□□□□ 0.92
PDLIM2-203ENST00000339162 ZNF566Q969W8 418 aa20.82■□□□□ 0.92
PDLIM2-203ENST00000339162 CNDP2Q96KP4 475 aaKnown RBP20.82■□□□□ 0.92
PDLIM2-203ENST00000339162 NODALQ96S42 347 aa20.82■□□□□ 0.92
PDLIM2-203ENST00000339162 DPYSL5Q9BPU6 564 aa20.82■□□□□ 0.92
PDLIM2-203ENST00000339162 SAP130Q9H0E3 1048 aa20.82■□□□□ 0.92
PDLIM2-203ENST00000339162 ZNF768Q9H5H4 540 aaKnown RBP20.82■□□□□ 0.92
PDLIM2-203ENST00000339162 PNO1Q9NRX1 252 aaKnown RBP20.82■□□□□ 0.92
PDLIM2-203ENST00000339162 FTSJ1Q9UET6 329 aa20.82■□□□□ 0.92
PDLIM2-203ENST00000339162 A0A087WUU8 490 aa20.81■□□□□ 0.92
PDLIM2-203ENST00000339162 ENO4A6NNW6 628 aa20.81■□□□□ 0.92
PDLIM2-203ENST00000339162 H3BN98 237 aa20.81■□□□□ 0.92
PDLIM2-203ENST00000339162 AP3D1O14617 1153 aa20.81■□□□□ 0.92
PDLIM2-203ENST00000339162 BRINP1O60477 761 aa20.81■□□□□ 0.92
PDLIM2-203ENST00000339162 FAM20BO75063 409 aa20.81■□□□□ 0.92
PDLIM2-203ENST00000339162 IGKV1D-16P01601 117 aa20.81■□□□□ 0.92
PDLIM2-203ENST00000339162 RPLP0P05388 317 aaKnown RBP20.81■□□□□ 0.92
PDLIM2-203ENST00000339162 EFNA3P52797 238 aa20.81■□□□□ 0.92
PDLIM2-203ENST00000339162 ZNHIT3Q15649 155 aaPredicted RBP20.81■□□□□ 0.92
PDLIM2-203ENST00000339162 ZBED5Q49AG3 693 aa20.81■□□□□ 0.92
PDLIM2-203ENST00000339162 NPSR1Q6W5P4 371 aa20.81■□□□□ 0.92
PDLIM2-203ENST00000339162 ARHGAP22Q7Z5H3 698 aa20.81■□□□□ 0.92
PDLIM2-203ENST00000339162 CLVS1Q8IUQ0 354 aaPredicted RBP20.81■□□□□ 0.92
PDLIM2-203ENST00000339162 ZNF614Q8N883 585 aa20.81■□□□□ 0.92
PDLIM2-203ENST00000339162 ZNF540Q8NDQ6 660 aa20.81■□□□□ 0.92
PDLIM2-203ENST00000339162 C16orf52Q8NHV5 167 aa20.81■□□□□ 0.92
PDLIM2-203ENST00000339162 POLR2J3Q9H1A7 115 aaKnown RBP20.81■□□□□ 0.92
PDLIM2-203ENST00000339162 C11orf16Q9NQ32 467 aa20.81■□□□□ 0.92
PDLIM2-203ENST00000339162 ZNF226Q9NYT6 803 aa20.81■□□□□ 0.92
PDLIM2-203ENST00000339162 THY1P04216 161 aa20.81■□□□□ 0.92
PDLIM2-203ENST00000339162 IFI6P09912 130 aa20.81■□□□□ 0.92
PDLIM2-203ENST00000339162 FOXL2P58012 376 aa20.81■□□□□ 0.92
PDLIM2-203ENST00000339162 BORAQ6PGQ7 559 aa20.81■□□□□ 0.92
PDLIM2-203ENST00000339162 PLEKHM3Q6ZWE6 761 aa20.81■□□□□ 0.92
PDLIM2-203ENST00000339162 ZNF321PQ8N8H1 164 aa20.81■□□□□ 0.92
PDLIM2-203ENST00000339162 PHOX2BQ99453 314 aa20.81■□□□□ 0.92
PDLIM2-203ENST00000339162 LMF2Q9BU23 707 aaKnown RBP20.81■□□□□ 0.92
PDLIM2-203ENST00000339162 OR10A5Q9H207 317 aa20.81■□□□□ 0.92
PDLIM2-203ENST00000339162 CDC14AQ9UNH5 594 aa20.81■□□□□ 0.92
PDLIM2-203ENST00000339162 C17orf105B2RV13 164 aa20.8■□□□□ 0.92
PDLIM2-203ENST00000339162 DBIP07108 87 aaKnown RBP20.8■□□□□ 0.92
PDLIM2-203ENST00000339162 OSMP13725 252 aa20.8■□□□□ 0.92
PDLIM2-203ENST00000339162 RPS4Y1P22090 263 aaKnown RBP20.8■□□□□ 0.92
PDLIM2-203ENST00000339162 CNR2P34972 360 aa20.8■□□□□ 0.92
PDLIM2-203ENST00000339162 GCGRP47871 477 aa20.8■□□□□ 0.92
PDLIM2-203ENST00000339162 FLYWCH1Q4VC44 716 aa20.8■□□□□ 0.92
PDLIM2-203ENST00000339162 NKAIN4Q8IVV8 208 aa20.8■□□□□ 0.92
PDLIM2-203ENST00000339162 HOXB13Q92826 284 aaPredicted RBP20.8■□□□□ 0.92
PDLIM2-203ENST00000339162 SMOC1Q9H4F8 434 aa20.8■□□□□ 0.92
PDLIM2-203ENST00000339162 ZNF304Q9HCX3 659 aa20.8■□□□□ 0.92
PDLIM2-203ENST00000339162 SCN3BQ9NY72 215 aa20.8■□□□□ 0.92
PDLIM2-203ENST00000339162 GMEB2Q9UKD1 530 aa20.8■□□□□ 0.92
PDLIM2-203ENST00000339162 PRAMEF2O60811 474 aa20.8■□□□□ 0.92
PDLIM2-203ENST00000339162 THBS1P07996 1170 aa20.8■□□□□ 0.92
PDLIM2-203ENST00000339162 NID1P14543 1247 aa20.8■□□□□ 0.92
PDLIM2-203ENST00000339162 ZNF136P52737 540 aa20.8■□□□□ 0.92
PDLIM2-203ENST00000339162 NUDT6P53370 316 aa20.8■□□□□ 0.92
PDLIM2-203ENST00000339162 SLC35A2P78381 396 aa20.8■□□□□ 0.92
PDLIM2-203ENST00000339162 TRIM61Q5EBN2 209 aa20.8■□□□□ 0.92
PDLIM2-203ENST00000339162 P3H2Q8IVL5 708 aa20.8■□□□□ 0.92
PDLIM2-203ENST00000339162 RHOXF1Q8NHV9 184 aa20.8■□□□□ 0.92
PDLIM2-203ENST00000339162 IMPAD1Q9NX62 359 aa20.8■□□□□ 0.92
PDLIM2-203ENST00000339162 TPRKBQ9Y3C4 175 aa20.8■□□□□ 0.92
PDLIM2-203ENST00000339162 ZAR1LA6NP61 321 aa20.79■□□□□ 0.92
PDLIM2-203ENST00000339162 MAN1A2O60476 641 aa20.79■□□□□ 0.92
PDLIM2-203ENST00000339162 CPNE6O95741 557 aa20.79■□□□□ 0.92
PDLIM2-203ENST00000339162 CXCR4P61073 352 aa20.79■□□□□ 0.92
PDLIM2-203ENST00000339162 FUT7Q11130 342 aa20.79■□□□□ 0.92
PDLIM2-203ENST00000339162 KMT5CQ86Y97 462 aa20.79■□□□□ 0.92
PDLIM2-203ENST00000339162 PTPMT1Q8WUK0 201 aaPredicted RBP20.79■□□□□ 0.92
PDLIM2-203ENST00000339162 SLC38A4Q969I6 547 aa20.79■□□□□ 0.92
PDLIM2-203ENST00000339162 MVB12AQ96EY5 273 aa20.79■□□□□ 0.92
PDLIM2-203ENST00000339162 ITPAQ9BY32 194 aa20.79■□□□□ 0.92
PDLIM2-203ENST00000339162 LIN28AQ9H9Z2 209 aaKnown RBP20.79■□□□□ 0.92
PDLIM2-203ENST00000339162 RSL24D1Q9UHA3 163 aaKnown RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms