RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 MEF2AQ02078 507 aaPredicted RBP10.09□□□□□ -0.79
RTN3-201ENST00000338850 SCN1BQ07699 218 aa10.09□□□□□ -0.79
RTN3-201ENST00000338850 TARDBPQ13148 414 aaKnown RBP eCLIP10.09□□□□□ -0.79
RTN3-201ENST00000338850 TRAM2Q15035 370 aa10.09□□□□□ -0.79
RTN3-201ENST00000338850 RPS26P11Q5JNZ5 115 aaPredicted RBP10.09□□□□□ -0.79
RTN3-201ENST00000338850 ARMC4Q5T2S8 1044 aa10.09□□□□□ -0.79
RTN3-201ENST00000338850 PIP5KL1Q5T9C9 394 aa10.09□□□□□ -0.79
RTN3-201ENST00000338850 TMEM53Q6P2H8 277 aa10.09□□□□□ -0.79
RTN3-201ENST00000338850 PODNL1Q6PEZ8 512 aa10.09□□□□□ -0.79
RTN3-201ENST00000338850 WASH2PQ6VEQ5 465 aa10.09□□□□□ -0.79
RTN3-201ENST00000338850 DEF8Q6ZN54 512 aa10.09□□□□□ -0.79
RTN3-201ENST00000338850 QSOX2Q6ZRP7 698 aa10.09□□□□□ -0.79
RTN3-201ENST00000338850 ZER1Q7Z7L7 766 aa10.09□□□□□ -0.79
RTN3-201ENST00000338850 SNX29P2Q8IUI4 249 aa10.09□□□□□ -0.79
RTN3-201ENST00000338850 SLC34A3Q8N130 599 aa10.09□□□□□ -0.79
RTN3-201ENST00000338850 TCEANCQ8N8B7 351 aa10.09□□□□□ -0.79
RTN3-201ENST00000338850 POGLUT1Q8NBL1 392 aa10.09□□□□□ -0.79
RTN3-201ENST00000338850 ZNF485Q8NCK3 441 aa10.09□□□□□ -0.79
RTN3-201ENST00000338850 OR4D11Q8NGI4 311 aa10.09□□□□□ -0.79
RTN3-201ENST00000338850 HTRA1Q92743 480 aa10.09□□□□□ -0.79
RTN3-201ENST00000338850 PMM1Q92871 262 aa10.09□□□□□ -0.79
RTN3-201ENST00000338850 RFKQ969G6 155 aa10.09□□□□□ -0.79
RTN3-201ENST00000338850 FAM131CQ96AQ9 280 aa10.09□□□□□ -0.79
RTN3-201ENST00000338850 ZC3HAV1LQ96H79 300 aaKnown RBP10.09□□□□□ -0.79
RTN3-201ENST00000338850 ZNF582Q96NG8 517 aaPredicted RBP10.09□□□□□ -0.79
RTN3-201ENST00000338850 SLC38A2Q96QD8 506 aa10.09□□□□□ -0.79
RTN3-201ENST00000338850 F2RL3Q96RI0 385 aa10.09□□□□□ -0.79
RTN3-201ENST00000338850 TEX12Q9BXU0 123 aa10.09□□□□□ -0.79
RTN3-201ENST00000338850 TWSG1Q9GZX9 223 aa10.09□□□□□ -0.79
RTN3-201ENST00000338850 CUEDC1Q9NWM3 386 aaPredicted RBP10.09□□□□□ -0.79
RTN3-201ENST00000338850 PHF11Q9UIL8 331 aa10.09□□□□□ -0.79
RTN3-201ENST00000338850 SF3B6Q9Y3B4 125 aaKnown RBP10.09□□□□□ -0.79
RTN3-201ENST00000338850 ASB4Q9Y574 426 aa10.09□□□□□ -0.79
RTN3-201ENST00000338850 MDC1Q14676 2089 aaKnown RBP10.09□□□□□ -0.79
RTN3-201ENST00000338850 TRPM6Q9BX84 2022 aa10.09□□□□□ -0.79
RTN3-201ENST00000338850 DSPP15924 2871 aaKnown RBP10.08□□□□□ -0.8
RTN3-201ENST00000338850 A0A1B0GTQ1 180 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 A0A1W2PR77 199 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 LRIT2A6NDA9 550 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 H3BN98 237 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 EMC8O43402 210 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 CHST10O43529 356 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 PRICKLE3O43900 615 aaPredicted RBP10.08□□□□□ -0.8
RTN3-201ENST00000338850 OR5F1O95221 314 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 NR2F1P10589 423 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 POU2F1P14859 743 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 FPR3P25089 353 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 GTF2E2P29084 291 aaKnown RBP10.08□□□□□ -0.8
RTN3-201ENST00000338850 RPS19P39019 145 aaKnown RBP10.08□□□□□ -0.8
RTN3-201ENST00000338850 STAT5AP42229 794 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 PPP2CBP62714 309 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 PPP3R1P63098 170 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 PPP2CAP67775 309 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 TGM3Q08188 693 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 CD300CQ08708 224 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 ST3GAL3Q11203 375 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 HSPB3Q12988 150 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 TP53BP2Q13625 1128 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 TSTA3Q13630 321 aaPredicted RBP10.08□□□□□ -0.8
RTN3-201ENST00000338850 SLC9A5Q14940 896 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 ZNF79Q15937 498 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 DECR1Q16698 335 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 DDI2Q5TDH0 399 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 NDUFAF5Q5TEU4 345 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 SLC27A4Q6P1M0 643 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 LAPTM4BQ86VI4 370 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 RAB43Q86YS6 212 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 SLC43A2Q8N370 569 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 TP53I13Q8NBR0 393 aaPredicted RBP10.08□□□□□ -0.8
RTN3-201ENST00000338850 OR2L5Q8NG80 312 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 OR6F1Q8NGZ6 308 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 OR52N1Q8NH53 320 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 OR14C36Q8NHC7 312 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 TEX47Q8TBZ9 253 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 DIO2Q92813 273 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 ZNF486Q96H40 463 aaPredicted RBP10.08□□□□□ -0.8
RTN3-201ENST00000338850 KCTD7Q96MP8 289 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 IL17FQ96PD4 163 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 IL4I1Q96RQ9 567 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 DPH7Q9BTV6 452 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 SORBS1Q9BX66 1292 aaKnown RBP10.08□□□□□ -0.8
RTN3-201ENST00000338850 RSPO3Q9BXY4 272 aaPredicted RBP10.08□□□□□ -0.8
RTN3-201ENST00000338850 BARHL1Q9BZE3 327 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 SLC22A4Q9H015 551 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 PRM3Q9NNZ6 103 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 POLE4Q9NR33 117 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 ZCCHC3Q9NUD5 404 aaKnown RBP10.08□□□□□ -0.8
RTN3-201ENST00000338850 GIMAP4Q9NUV9 329 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 ASB6Q9NWX5 421 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 TXNL4BQ9NX01 149 aaKnown RBP10.08□□□□□ -0.8
RTN3-201ENST00000338850 TEX10Q9NXF1 929 aaPredicted RBP10.08□□□□□ -0.8
RTN3-201ENST00000338850 TAS2R16Q9NYV7 291 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 DNAJC27Q9NZQ0 273 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 FBXW2Q9UKT8 454 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 EXOGQ9Y2C4 368 aaKnown RBP10.08□□□□□ -0.8
RTN3-201ENST00000338850 GSTK1Q9Y2Q3 226 aa10.08□□□□□ -0.8
RTN3-201ENST00000338850 DMXL2Q8TDJ6 3036 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 CACNA1GO43497 2377 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 HMX3A6NHT5 357 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 DUXAA6NLW8 204 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms