RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 FOXA1P55317 472 aa9.64□□□□□ -0.87
CAPN3-202ENST00000337571 RPS3AP61247 264 aaKnown RBP9.64□□□□□ -0.87
CAPN3-202ENST00000337571 C17orf67Q0P5P2 114 aa9.64□□□□□ -0.87
CAPN3-202ENST00000337571 STX5Q13190 355 aa9.64□□□□□ -0.87
CAPN3-202ENST00000337571 FGFBP1Q14512 234 aa9.64□□□□□ -0.87
CAPN3-202ENST00000337571 POU4F3Q15319 338 aa9.64□□□□□ -0.87
CAPN3-202ENST00000337571 SGCBQ16585 318 aa9.64□□□□□ -0.87
CAPN3-202ENST00000337571 DEFB113Q30KQ7 82 aa9.64□□□□□ -0.87
CAPN3-202ENST00000337571 VPS26BQ4G0F5 336 aa9.64□□□□□ -0.87
CAPN3-202ENST00000337571 FAM71E1Q6IPT2 247 aa9.64□□□□□ -0.87
CAPN3-202ENST00000337571 PLXDC2Q6UX71 529 aa9.64□□□□□ -0.87
CAPN3-202ENST00000337571 IKBIPQ70UQ0 350 aa9.64□□□□□ -0.87
CAPN3-202ENST00000337571 ADGRE4PQ86SQ3 457 aa9.64□□□□□ -0.87
CAPN3-202ENST00000337571 HOMEZQ8IX15 550 aa9.64□□□□□ -0.87
CAPN3-202ENST00000337571 OR2M3Q8NG83 312 aa9.64□□□□□ -0.87
CAPN3-202ENST00000337571 SMPDL3BQ92485 455 aa9.64□□□□□ -0.87
CAPN3-202ENST00000337571 ELP4Q96EB1 424 aa9.64□□□□□ -0.87
CAPN3-202ENST00000337571 C11orf24Q96F05 449 aaPredicted RBP9.64□□□□□ -0.87
CAPN3-202ENST00000337571 METTL2AQ96IZ6 378 aaKnown RBP9.64□□□□□ -0.87
CAPN3-202ENST00000337571 AMDHD1Q96NU7 426 aa9.64□□□□□ -0.87
CAPN3-202ENST00000337571 FAM111AQ96PZ2 611 aa9.64□□□□□ -0.87
CAPN3-202ENST00000337571 PIGQQ9BRB3 760 aa9.64□□□□□ -0.87
CAPN3-202ENST00000337571 GLIPR2Q9H4G4 154 aa9.64□□□□□ -0.87
CAPN3-202ENST00000337571 FAM120CQ9NX05 1096 aaKnown RBP9.64□□□□□ -0.87
CAPN3-202ENST00000337571 ZNF226Q9NYT6 803 aa9.64□□□□□ -0.87
CAPN3-202ENST00000337571 MED11Q9P086 117 aa9.64□□□□□ -0.87
CAPN3-202ENST00000337571 CLCF1Q9UBD9 225 aa9.64□□□□□ -0.87
CAPN3-202ENST00000337571 A0A1W2PNV4 684 aa9.63□□□□□ -0.87
CAPN3-202ENST00000337571 G3V2L1 256 aa9.63□□□□□ -0.87
CAPN3-202ENST00000337571 H3BML4 177 aa9.63□□□□□ -0.87
CAPN3-202ENST00000337571 UPK1AO00322 258 aa9.63□□□□□ -0.87
CAPN3-202ENST00000337571 COPEO14579 308 aa9.63□□□□□ -0.87
CAPN3-202ENST00000337571 SEC14L5O43304 696 aa9.63□□□□□ -0.87
CAPN3-202ENST00000337571 TNFRSF21O75509 655 aa9.63□□□□□ -0.87
CAPN3-202ENST00000337571 ATE1O95260 518 aa9.63□□□□□ -0.87
CAPN3-202ENST00000337571 CHEK2O96017 543 aa9.63□□□□□ -0.87
CAPN3-202ENST00000337571 FAM153BP0C7A2 387 aa9.63□□□□□ -0.87
CAPN3-202ENST00000337571 PRPS2P11908 318 aa9.63□□□□□ -0.87
CAPN3-202ENST00000337571 CRHR1P34998 444 aa9.63□□□□□ -0.87
CAPN3-202ENST00000337571 PRKAG1P54619 331 aa9.63□□□□□ -0.87
CAPN3-202ENST00000337571 DNAJB13P59910 316 aa9.63□□□□□ -0.87
CAPN3-202ENST00000337571 ADAM8P78325 824 aa9.63□□□□□ -0.87
CAPN3-202ENST00000337571 FOXD4Q12950 439 aaPredicted RBP9.63□□□□□ -0.87
CAPN3-202ENST00000337571 FAM153CQ494X1 144 aa9.63□□□□□ -0.87
CAPN3-202ENST00000337571 GLYR1Q49A26 553 aaPredicted RBP9.63□□□□□ -0.87
CAPN3-202ENST00000337571 FRMD7Q6ZUT3 714 aa9.63□□□□□ -0.87
CAPN3-202ENST00000337571 MARCH3Q86UD3 253 aa9.63□□□□□ -0.87
CAPN3-202ENST00000337571 MED12LQ86YW9 2145 aa9.63□□□□□ -0.87
CAPN3-202ENST00000337571 OR2L13Q8N349 312 aa9.63□□□□□ -0.87
CAPN3-202ENST00000337571 FADS6Q8N9I5 356 aa9.63□□□□□ -0.87
CAPN3-202ENST00000337571 CEP70Q8NHQ1 597 aa9.63□□□□□ -0.87
CAPN3-202ENST00000337571 ZFP28Q8NHY6 868 aa9.63□□□□□ -0.87
CAPN3-202ENST00000337571 GPR151Q8TDV0 419 aa9.63□□□□□ -0.87
CAPN3-202ENST00000337571 UBLCP1Q8WVY7 318 aaPredicted RBP9.63□□□□□ -0.87
CAPN3-202ENST00000337571 GFM2Q969S9 779 aaKnown RBP9.63□□□□□ -0.87
CAPN3-202ENST00000337571 PGM2Q96G03 612 aa9.63□□□□□ -0.87
CAPN3-202ENST00000337571 G6PC3Q9BUM1 346 aa9.63□□□□□ -0.87
CAPN3-202ENST00000337571 PRRG4Q9BZD6 226 aa9.63□□□□□ -0.87
CAPN3-202ENST00000337571 PLEKHF2Q9H8W4 249 aa9.63□□□□□ -0.87
CAPN3-202ENST00000337571 PPCSQ9HAB8 311 aa9.63□□□□□ -0.87
CAPN3-202ENST00000337571 OXSMQ9NWU1 459 aa9.63□□□□□ -0.87
CAPN3-202ENST00000337571 ELOVL5Q9NYP7 299 aa9.63□□□□□ -0.87
CAPN3-202ENST00000337571 ZNF337Q9Y3M9 751 aa9.63□□□□□ -0.87
CAPN3-202ENST00000337571 C2CD3Q4AC94 2353 aa9.63□□□□□ -0.87
CAPN3-202ENST00000337571 ZFHX3Q15911 3703 aa9.62□□□□□ -0.87
CAPN3-202ENST00000337571 VPS13CQ709C8 3753 aa9.62□□□□□ -0.87
CAPN3-202ENST00000337571 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.62□□□□□ -0.87
CAPN3-202ENST00000337571 OR2M5A3KFT3 312 aa9.62□□□□□ -0.87
CAPN3-202ENST00000337571 SMIM23A6NLE4 172 aa9.62□□□□□ -0.87
CAPN3-202ENST00000337571 ARHGEF9O43307 516 aa9.62□□□□□ -0.87
CAPN3-202ENST00000337571 HCRTR2O43614 444 aa9.62□□□□□ -0.87
CAPN3-202ENST00000337571 GMFGO60234 142 aa9.62□□□□□ -0.87
CAPN3-202ENST00000337571 TNFSF13O75888 250 aa9.62□□□□□ -0.87
CAPN3-202ENST00000337571 PROCP04070 461 aa9.62□□□□□ -0.87
CAPN3-202ENST00000337571 HRGP04196 525 aa9.62□□□□□ -0.87
CAPN3-202ENST00000337571 HPGDP15428 266 aa9.62□□□□□ -0.87
CAPN3-202ENST00000337571 DDX5P17844 614 aaKnown RBP9.62□□□□□ -0.87
CAPN3-202ENST00000337571 MANFP55145 182 aaKnown RBP9.62□□□□□ -0.87
CAPN3-202ENST00000337571 B3GALT5-AS1P59052 145 aa9.62□□□□□ -0.87
CAPN3-202ENST00000337571 SIRPAP78324 504 aa9.62□□□□□ -0.87
CAPN3-202ENST00000337571 FAM27E3Q08E93 113 aa9.62□□□□□ -0.87
CAPN3-202ENST00000337571 HSPB3Q12988 150 aa9.62□□□□□ -0.87
CAPN3-202ENST00000337571 PRSS53Q2L4Q9 553 aa9.62□□□□□ -0.87
CAPN3-202ENST00000337571 PPP4R4Q6NUP7 873 aa9.62□□□□□ -0.87
CAPN3-202ENST00000337571 SZRD1Q7Z422 152 aa9.62□□□□□ -0.87
CAPN3-202ENST00000337571 OR5M1Q8NGP8 315 aa9.62□□□□□ -0.87
CAPN3-202ENST00000337571 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.62□□□□□ -0.87
CAPN3-202ENST00000337571 MZB1Q8WU39 189 aa9.62□□□□□ -0.87
CAPN3-202ENST00000337571 RNF138Q8WVD3 245 aa9.62□□□□□ -0.87
CAPN3-202ENST00000337571 PPCDCQ96CD2 204 aa9.62□□□□□ -0.87
CAPN3-202ENST00000337571 STARD4Q96DR4 205 aa9.62□□□□□ -0.87
CAPN3-202ENST00000337571 C1GALT1C1Q96EU7 318 aa9.62□□□□□ -0.87
CAPN3-202ENST00000337571 ZNF845Q96IR2 970 aaPredicted RBP9.62□□□□□ -0.87
CAPN3-202ENST00000337571 LMF2Q9BU23 707 aaKnown RBP9.62□□□□□ -0.87
CAPN3-202ENST00000337571 MED18Q9BUE0 208 aa9.62□□□□□ -0.87
CAPN3-202ENST00000337571 PINK1Q9BXM7 581 aa9.62□□□□□ -0.87
CAPN3-202ENST00000337571 LRTM1Q9HBL6 345 aa9.62□□□□□ -0.87
CAPN3-202ENST00000337571 EQTNQ9NQ60 294 aa9.62□□□□□ -0.87
CAPN3-202ENST00000337571 BEX4Q9NWD9 120 aaPredicted RBP9.62□□□□□ -0.87
CAPN3-202ENST00000337571 C1orf109Q9NX04 203 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms