RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 GSTM3P21266 225 aa18.64■□□□□ 0.57
CDCA4-201ENST00000336219 DUSP6Q16828 381 aa18.64■□□□□ 0.57
CDCA4-201ENST00000336219 BCL2L15Q5TBC7 163 aa18.64■□□□□ 0.57
CDCA4-201ENST00000336219 OR4Q3Q8NH05 313 aa18.64■□□□□ 0.57
CDCA4-201ENST00000336219 SUN3Q8TAQ9 357 aa18.64■□□□□ 0.57
CDCA4-201ENST00000336219 OTULINQ96BN8 352 aa18.64■□□□□ 0.57
CDCA4-201ENST00000336219 ZG16BQ96DA0 208 aa18.64■□□□□ 0.57
CDCA4-201ENST00000336219 ISG20L2Q9H9L3 353 aaKnown RBP18.64■□□□□ 0.57
CDCA4-201ENST00000336219 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.64■□□□□ 0.57
CDCA4-201ENST00000336219 LOC105371267A0A1B0GV96 52 aa18.64■□□□□ 0.57
CDCA4-201ENST00000336219 NTSP30990 170 aa18.64■□□□□ 0.57
CDCA4-201ENST00000336219 TRIM23P36406 574 aa18.64■□□□□ 0.57
CDCA4-201ENST00000336219 TAS2R38P59533 333 aa18.64■□□□□ 0.57
CDCA4-201ENST00000336219 LASP1Q14847 261 aaKnown RBP18.64■□□□□ 0.57
CDCA4-201ENST00000336219 TMEM64Q6YI46 380 aa18.64■□□□□ 0.57
CDCA4-201ENST00000336219 BBS4Q96RK4 519 aa18.64■□□□□ 0.57
CDCA4-201ENST00000336219 ZNF649Q9BS31 505 aa18.64■□□□□ 0.57
CDCA4-201ENST00000336219 FAIM2Q9BWQ8 316 aa18.64■□□□□ 0.57
CDCA4-201ENST00000336219 C11orf49Q9H6J7 331 aa18.64■□□□□ 0.57
CDCA4-201ENST00000336219 ISYNA1Q9NPH2 558 aa18.64■□□□□ 0.57
CDCA4-201ENST00000336219 DOCK9Q9BZ29 2069 aa18.63■□□□□ 0.57
CDCA4-201ENST00000336219 TRAV6A0A075B6T7 132 aa18.63■□□□□ 0.57
CDCA4-201ENST00000336219 A0A1W2PS29 197 aa18.63■□□□□ 0.57
CDCA4-201ENST00000336219 KDM4EB2RXH2 506 aaPredicted RBP18.63■□□□□ 0.57
CDCA4-201ENST00000336219 CASC3O15234 703 aaKnown RBP18.63■□□□□ 0.57
CDCA4-201ENST00000336219 WDR45BQ5MNZ6 344 aa18.63■□□□□ 0.57
CDCA4-201ENST00000336219 EOGTQ5NDL2 527 aa18.63■□□□□ 0.57
CDCA4-201ENST00000336219 SDE2Q6IQ49 451 aa18.63■□□□□ 0.57
CDCA4-201ENST00000336219 ANKRD54Q6NXT1 300 aa18.63■□□□□ 0.57
CDCA4-201ENST00000336219 ZNF767PQ75MW2 155 aa18.63■□□□□ 0.57
CDCA4-201ENST00000336219 MACROD1Q9BQ69 325 aa18.63■□□□□ 0.57
CDCA4-201ENST00000336219 CRISPLD2Q9H0B8 497 aa18.63■□□□□ 0.57
CDCA4-201ENST00000336219 KLHL31Q9H511 634 aa18.63■□□□□ 0.57
CDCA4-201ENST00000336219 SEMA4GQ9NTN9 838 aa18.63■□□□□ 0.57
CDCA4-201ENST00000336219 MOSPD1Q9UJG1 213 aa18.63■□□□□ 0.57
CDCA4-201ENST00000336219 ZFR2Q9UPR6 939 aaKnown RBP18.63■□□□□ 0.57
CDCA4-201ENST00000336219 CSNK1G3Q9Y6M4 447 aa18.63■□□□□ 0.57
CDCA4-201ENST00000336219 ZC3H12DA2A288 527 aaKnown RBP18.63■□□□□ 0.57
CDCA4-201ENST00000336219 SGK494L7N484 410 aa18.63■□□□□ 0.57
CDCA4-201ENST00000336219 SCO1O75880 301 aa18.63■□□□□ 0.57
CDCA4-201ENST00000336219 HMGN2P05204 90 aaKnown RBP18.63■□□□□ 0.57
CDCA4-201ENST00000336219 TAS2R41P59536 307 aa18.63■□□□□ 0.57
CDCA4-201ENST00000336219 PRDX1Q06830 199 aaKnown RBP18.63■□□□□ 0.57
CDCA4-201ENST00000336219 PIP5KL1Q5T9C9 394 aa18.63■□□□□ 0.57
CDCA4-201ENST00000336219 C16orf58Q96GQ5 468 aa18.63■□□□□ 0.57
CDCA4-201ENST00000336219 SECISBP2Q96T21 854 aaKnown RBP18.63■□□□□ 0.57
CDCA4-201ENST00000336219 PINK1Q9BXM7 581 aa18.63■□□□□ 0.57
CDCA4-201ENST00000336219 HDAC8Q9BY41 377 aa18.63■□□□□ 0.57
CDCA4-201ENST00000336219 ZDHHC4Q9NPG8 344 aa18.63■□□□□ 0.57
CDCA4-201ENST00000336219 INSL6Q9Y581 213 aa18.63■□□□□ 0.57
CDCA4-201ENST00000336219 IGLON5A6NGN9 336 aa18.62■□□□□ 0.57
CDCA4-201ENST00000336219 FAM183AA6NL82 134 aa18.62■□□□□ 0.57
CDCA4-201ENST00000336219 SOCS6O14544 535 aa18.62■□□□□ 0.57
CDCA4-201ENST00000336219 ERAL1O75616 437 aaKnown RBP18.62■□□□□ 0.57
CDCA4-201ENST00000336219 SYPP08247 313 aa18.62■□□□□ 0.57
CDCA4-201ENST00000336219 CTNNB1P35222 781 aa18.62■□□□□ 0.57
CDCA4-201ENST00000336219 GPR4P46093 362 aa18.62■□□□□ 0.57
CDCA4-201ENST00000336219 SRP9P49458 86 aaKnown RBP18.62■□□□□ 0.57
CDCA4-201ENST00000336219 ADAM15Q13444 863 aa18.62■□□□□ 0.57
CDCA4-201ENST00000336219 FZD5Q13467 585 aa18.62■□□□□ 0.57
CDCA4-201ENST00000336219 METAP1DQ6UB28 335 aaPredicted RBP18.62■□□□□ 0.57
CDCA4-201ENST00000336219 MRGPREQ86SM8 312 aa18.62■□□□□ 0.57
CDCA4-201ENST00000336219 OR2A1Q8NGT9 310 aa18.62■□□□□ 0.57
CDCA4-201ENST00000336219 PCNPQ8WW12 178 aaKnown RBP18.62■□□□□ 0.57
CDCA4-201ENST00000336219 SLC38A2Q96QD8 506 aa18.62■□□□□ 0.57
CDCA4-201ENST00000336219 FERD3LQ96RJ6 166 aa18.62■□□□□ 0.57
CDCA4-201ENST00000336219 PPIL3Q9H2H8 161 aaKnown RBP18.62■□□□□ 0.57
CDCA4-201ENST00000336219 NARFLQ9H6Q4 476 aa18.62■□□□□ 0.57
CDCA4-201ENST00000336219 ATP13A2Q9NQ11 1180 aa18.62■□□□□ 0.57
CDCA4-201ENST00000336219 SIRT4Q9Y6E7 314 aaPredicted RBP18.62■□□□□ 0.57
CDCA4-201ENST00000336219 A0A0G2JPF8 293 aa18.62■□□□□ 0.57
CDCA4-201ENST00000336219 IRGMA1A4Y4 181 aa18.62■□□□□ 0.57
CDCA4-201ENST00000336219 HNRNPCL2B2RXH8 293 aa18.62■□□□□ 0.57
CDCA4-201ENST00000336219 HNRNPCL3B7ZW38 293 aa18.62■□□□□ 0.57
CDCA4-201ENST00000336219 C4orf51C9J302 202 aa18.62■□□□□ 0.57
CDCA4-201ENST00000336219 C1QTNF3-AMACRE9PGA6 284 aa18.62■□□□□ 0.57
CDCA4-201ENST00000336219 HLA-DPB1P04440 258 aa18.62■□□□□ 0.57
CDCA4-201ENST00000336219 HNRNPCL4P0DMR1 293 aa18.62■□□□□ 0.57
CDCA4-201ENST00000336219 PKLRP30613 574 aa18.62■□□□□ 0.57
CDCA4-201ENST00000336219 ANXA11P50995 505 aaKnown RBP18.62■□□□□ 0.57
CDCA4-201ENST00000336219 GNA13Q14344 377 aa18.62■□□□□ 0.57
CDCA4-201ENST00000336219 SLC9A5Q14940 896 aa18.62■□□□□ 0.57
CDCA4-201ENST00000336219 MLF2Q15773 248 aaPredicted RBP18.62■□□□□ 0.57
CDCA4-201ENST00000336219 TMEM35AQ53FP2 167 aa18.62■□□□□ 0.57
CDCA4-201ENST00000336219 FAM27D1Q5T7N8 215 aa18.62■□□□□ 0.57
CDCA4-201ENST00000336219 SPPL3Q8TCT6 385 aa18.62■□□□□ 0.57
CDCA4-201ENST00000336219 SFXN5Q8TD22 340 aa18.62■□□□□ 0.57
CDCA4-201ENST00000336219 RAB7BQ96AH8 199 aa18.62■□□□□ 0.57
CDCA4-201ENST00000336219 ZNF707Q96C28 371 aaPredicted RBP18.62■□□□□ 0.57
CDCA4-201ENST00000336219 TBX5Q99593 518 aa18.62■□□□□ 0.57
CDCA4-201ENST00000336219 LIPT1Q9Y234 373 aa18.62■□□□□ 0.57
CDCA4-201ENST00000336219 C5orf42Q9H799 3197 aa18.62■□□□□ 0.57
CDCA4-201ENST00000336219 ANTXRLA6NF34 631 aa18.61■□□□□ 0.57
CDCA4-201ENST00000336219 PGRMC2O15173 223 aa18.61■□□□□ 0.57
CDCA4-201ENST00000336219 EIF4EP06730 217 aaKnown RBP18.61■□□□□ 0.57
CDCA4-201ENST00000336219 TRHRP34981 398 aaPredicted RBP18.61■□□□□ 0.57
CDCA4-201ENST00000336219 DUSP2Q05923 314 aa18.61■□□□□ 0.57
CDCA4-201ENST00000336219 RNASE12Q5GAN4 147 aaKnown RBP18.61■□□□□ 0.57
CDCA4-201ENST00000336219 MZT2AQ6P582 158 aa18.61■□□□□ 0.57
CDCA4-201ENST00000336219 BHLHB9Q6PI77 547 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms