RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 OAFQ86UD1 273 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 NRSN1Q8IZ57 195 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 FAM86B1Q8N7N1 296 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 GNPDA2Q8TDQ7 276 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 KIF12Q96FN5 646 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 FAM193BQ96PV7 902 aaPredicted RBP8.12□□□□□ -1.11
TDP1-201ENST00000335725 ZNF700Q9H0M5 742 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 OSBPL2Q9H1P3 480 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 IKZF4Q9H2S9 585 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 ELP3Q9H9T3 547 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 SLC52A3Q9NQ40 469 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 DCAF13Q9NV06 445 aaKnown RBP8.12□□□□□ -1.11
TDP1-201ENST00000335725 RNF24Q9Y225 148 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 PUS1Q9Y606 427 aaKnown RBP eCLIP8.12□□□□□ -1.11
TDP1-201ENST00000335725 CCDC187A0A096LP49 1063 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 DDX39AO00148 427 aaKnown RBP8.11□□□□□ -1.11
TDP1-201ENST00000335725 PIP5K1BO14986 540 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 INSIG1O15503 277 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 SOX15O60248 233 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 GPRIN2O60269 458 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 CACNG3O60359 315 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 METTL18O95568 372 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 SLC35G4P0C7Q5 338 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 RENBPP51606 427 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 KIAA0141Q14154 515 aaPredicted RBP8.11□□□□□ -1.11
TDP1-201ENST00000335725 NKG7Q16617 165 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 ATP6AP1LQ52LC2 224 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 ARSJQ5FYB0 599 aaPredicted RBP8.11□□□□□ -1.11
TDP1-201ENST00000335725 PRAMEF18Q5VWM3 479 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 EIF5AL1Q6IS14 154 aaKnown RBP8.11□□□□□ -1.11
TDP1-201ENST00000335725 USP17L6PQ6QN14 398 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 B3GLCTQ6Y288 498 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 TOMM5Q8N4H5 51 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 OR56B1Q8NGI3 324 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 BBS10Q8TAM1 723 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 PHYHIPQ92561 330 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 OR4K3Q96R72 315 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 CDC6Q99741 560 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 NAA11Q9BSU3 229 aaPredicted RBP8.11□□□□□ -1.11
TDP1-201ENST00000335725 SLC27A6Q9Y2P4 619 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 FXYD6-FXYD2A0A087WZ82 144 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 A0A087X1B8 175 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 TCF21O43680 179 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 PIPP12273 146 aaPredicted RBP8.11□□□□□ -1.11
TDP1-201ENST00000335725 HGFP14210 728 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 CPT2P23786 658 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 ADH6P28332 368 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 HOXA13P31271 388 aaPredicted RBP8.11□□□□□ -1.11
TDP1-201ENST00000335725 CNTN1Q12860 1018 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 SLC35G1Q2M3R5 365 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 IL20RBQ6UXL0 311 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 LRP10Q7Z4F1 713 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 GALNTL5Q7Z4T8 443 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 PHACTR4Q8IZ21 702 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 SYNPOQ8N3V7 929 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 NUDT11Q96G61 164 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 CDKN2AIPNLQ96HQ2 116 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 TGM7Q96PF1 710 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 TMEM106CQ9BVX2 250 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 POTEKPQ9BYX7 375 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 FXYD6Q9H0Q3 95 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 NTMQ9P121 344 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 FBXL3Q9UKT7 428 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 A0A0D9SG52 128 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 OR10H3O60404 316 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 OR2A4O95047 310 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 CSTAP01040 98 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 PPBPP02775 128 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 RPA2P15927 270 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 APOBEC3AP31941 199 aaPredicted RBP8.11□□□□□ -1.11
TDP1-201ENST00000335725 CTBP2P56545 445 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 CLDN10P78369 228 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 ITKQ08881 620 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 ASPRV1Q53RT3 343 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 AKR1C8PQ5T2L2 129 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 OTUD1Q5VV17 481 aaPredicted RBP8.11□□□□□ -1.11
TDP1-201ENST00000335725 FBXO42Q6P3S6 717 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 MOXD1Q6UVY6 613 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 NRROSQ86YC3 692 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 B3GNT7Q8NFL0 401 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 OR1J4Q8NGS1 313 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 OR10A6Q8NH74 314 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 SMAP2Q8WU79 429 aaPredicted RBP8.11□□□□□ -1.11
TDP1-201ENST00000335725 PIH1D2Q8WWB5 315 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 OR2A7Q96R45 310 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 TEAD3Q99594 435 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 POLR2J2Q9GZM3 115 aaKnown RBP8.11□□□□□ -1.11
TDP1-201ENST00000335725 RHOJQ9H4E5 214 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 REEP1Q9H902 201 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 SFXN1Q9H9B4 322 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 MAN2C1Q9NTJ4 1040 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 CLN6Q9NWW5 311 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 ZIM2Q9NZV7 527 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 H2AFY2Q9P0M6 372 aaPredicted RBP8.11□□□□□ -1.11
TDP1-201ENST00000335725 APOBEC3BQ9UH17 382 aaKnown RBP8.11□□□□□ -1.11
TDP1-201ENST00000335725 CLEC2DQ9UHP7 191 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 GPR34Q9UPC5 381 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 SCN9AQ15858 1988 aa8.11□□□□□ -1.11
TDP1-201ENST00000335725 MICAL3Q7RTP6 2002 aa8.1□□□□□ -1.11
TDP1-201ENST00000335725 SCN7AQ01118 1682 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms