RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 MBOAT2Q6ZWT7 520 aa13.58□□□□□ -0.23
TPM3-206ENST00000330188 NRMQ8IXM6 262 aa13.58□□□□□ -0.23
TPM3-206ENST00000330188 TMEFF1Q8IYR6 380 aa13.58□□□□□ -0.23
TPM3-206ENST00000330188 POGLUT1Q8NBL1 392 aa13.58□□□□□ -0.23
TPM3-206ENST00000330188 DOK4Q8TEW6 326 aa13.58□□□□□ -0.23
TPM3-206ENST00000330188 FAM3CQ92520 227 aa13.58□□□□□ -0.23
TPM3-206ENST00000330188 HTRA1Q92743 480 aa13.58□□□□□ -0.23
TPM3-206ENST00000330188 PRRG3Q9BZD7 231 aa13.58□□□□□ -0.23
TPM3-206ENST00000330188 CHCHD3Q9NX63 227 aaKnown RBP13.58□□□□□ -0.23
TPM3-206ENST00000330188 IL20Q9NYY1 176 aa13.58□□□□□ -0.23
TPM3-206ENST00000330188 C19orf53Q9UNZ5 99 aaPredicted RBP13.58□□□□□ -0.23
TPM3-206ENST00000330188 TMEM129A0AVI4 362 aa13.58□□□□□ -0.24
TPM3-206ENST00000330188 LRRC72A6NJI9 287 aa13.58□□□□□ -0.24
TPM3-206ENST00000330188 LOC110117498-PIK3R3F6TDL0 507 aa13.58□□□□□ -0.24
TPM3-206ENST00000330188 SURF4O15260 269 aa13.58□□□□□ -0.24
TPM3-206ENST00000330188 SNX4O95219 450 aa13.58□□□□□ -0.24
TPM3-206ENST00000330188 ZNF136P52737 540 aa13.58□□□□□ -0.24
TPM3-206ENST00000330188 SFSWAPQ12872 951 aaKnown RBP13.58□□□□□ -0.24
TPM3-206ENST00000330188 DUSP8Q13202 625 aa13.58□□□□□ -0.24
TPM3-206ENST00000330188 LARS2Q15031 903 aaKnown RBP13.58□□□□□ -0.24
TPM3-206ENST00000330188 RAB30Q15771 203 aa13.58□□□□□ -0.24
TPM3-206ENST00000330188 SLC30A6Q6NXT4 461 aa13.58□□□□□ -0.24
TPM3-206ENST00000330188 Q6ZSR6 202 aa13.58□□□□□ -0.24
TPM3-206ENST00000330188 ZBTB8BQ8NAP8 495 aaPredicted RBP13.58□□□□□ -0.24
TPM3-206ENST00000330188 TMEM52Q8NDY8 209 aa13.58□□□□□ -0.24
TPM3-206ENST00000330188 RPLP0P6Q8NHW5 317 aa13.58□□□□□ -0.24
TPM3-206ENST00000330188 TM9SF4Q92544 642 aa13.58□□□□□ -0.24
TPM3-206ENST00000330188 PIK3R3Q92569 461 aa13.58□□□□□ -0.24
TPM3-206ENST00000330188 OSTF1Q92882 214 aa13.58□□□□□ -0.24
TPM3-206ENST00000330188 NELL2Q99435 816 aa13.58□□□□□ -0.24
TPM3-206ENST00000330188 SLC30A2Q9BRI3 323 aa13.58□□□□□ -0.24
TPM3-206ENST00000330188 MCOLN1Q9GZU1 580 aa13.58□□□□□ -0.24
TPM3-206ENST00000330188 ZNF350Q9GZX5 532 aa13.58□□□□□ -0.24
TPM3-206ENST00000330188 PIGUQ9H490 435 aa13.58□□□□□ -0.24
TPM3-206ENST00000330188 CACYBPQ9HB71 228 aaKnown RBP13.58□□□□□ -0.24
TPM3-206ENST00000330188 SNTG1Q9NSN8 517 aa13.58□□□□□ -0.24
TPM3-206ENST00000330188 SLC7A7Q9UM01 511 aa13.58□□□□□ -0.24
TPM3-206ENST00000330188 ZNF232Q9UNY5 417 aa13.58□□□□□ -0.24
TPM3-206ENST00000330188 EXOSC1Q9Y3B2 195 aaKnown RBP13.58□□□□□ -0.24
TPM3-206ENST00000330188 SPIN1Q9Y657 262 aaPredicted RBP13.58□□□□□ -0.24
TPM3-206ENST00000330188 SPTBN5Q9NRC6 3674 aaKnown RBP13.57□□□□□ -0.24
TPM3-206ENST00000330188 PLD2O14939 933 aa13.57□□□□□ -0.24
TPM3-206ENST00000330188 AQP9O43315 295 aa13.57□□□□□ -0.24
TPM3-206ENST00000330188 FGF17O60258 216 aa13.57□□□□□ -0.24
TPM3-206ENST00000330188 LDB3O75112 727 aa13.57□□□□□ -0.24
TPM3-206ENST00000330188 PTTG1O95997 202 aa13.57□□□□□ -0.24
TPM3-206ENST00000330188 EIF2S1P05198 315 aaKnown RBP13.57□□□□□ -0.24
TPM3-206ENST00000330188 THBS1P07996 1170 aa13.57□□□□□ -0.24
TPM3-206ENST00000330188 SPNP16150 400 aa13.57□□□□□ -0.24
TPM3-206ENST00000330188 RPS4Y1P22090 263 aaKnown RBP13.57□□□□□ -0.24
TPM3-206ENST00000330188 TNFSF8P32971 234 aa13.57□□□□□ -0.24
TPM3-206ENST00000330188 RORCP51449 518 aa13.57□□□□□ -0.24
TPM3-206ENST00000330188 ILF3Q12906 894 aaKnown RBP eCLIP13.57□□□□□ -0.24
TPM3-206ENST00000330188 ZNF620Q6ZNG0 422 aa13.57□□□□□ -0.24
TPM3-206ENST00000330188 SHFQ7M4L6 423 aa13.57□□□□□ -0.24
TPM3-206ENST00000330188 BAHD1Q8TBE0 780 aaPredicted RBP13.57□□□□□ -0.24
TPM3-206ENST00000330188 ZFPM2Q8WW38 1151 aa13.57□□□□□ -0.24
TPM3-206ENST00000330188 RSC1A1Q92681 617 aa13.57□□□□□ -0.24
TPM3-206ENST00000330188 RERGQ96A58 199 aaPredicted RBP13.57□□□□□ -0.24
TPM3-206ENST00000330188 CEP19Q96LK0 163 aa13.57□□□□□ -0.24
TPM3-206ENST00000330188 MIR1-1HGQ9H1L0 117 aa13.57□□□□□ -0.24
TPM3-206ENST00000330188 IL21RQ9HBE5 538 aa13.57□□□□□ -0.24
TPM3-206ENST00000330188 ADAP2Q9NPF8 381 aa13.57□□□□□ -0.24
TPM3-206ENST00000330188 TXNL4BQ9NX01 149 aaKnown RBP13.57□□□□□ -0.24
TPM3-206ENST00000330188 TCRBV21S2A2A0A5A6 115 aa13.57□□□□□ -0.24
TPM3-206ENST00000330188 C2orf74A8MZ97 194 aa13.57□□□□□ -0.24
TPM3-206ENST00000330188 STK25O00506 426 aa13.57□□□□□ -0.24
TPM3-206ENST00000330188 ZSCAN9O15535 394 aaPredicted RBP13.57□□□□□ -0.24
TPM3-206ENST00000330188 KCNK2O95069 426 aa13.57□□□□□ -0.24
TPM3-206ENST00000330188 CH25HO95992 272 aa13.57□□□□□ -0.24
TPM3-206ENST00000330188 TSPAN19P0C672 248 aa13.57□□□□□ -0.24
TPM3-206ENST00000330188 LIMS3P0CW19 117 aa13.57□□□□□ -0.24
TPM3-206ENST00000330188 LIMS4P0CW20 117 aa13.57□□□□□ -0.24
TPM3-206ENST00000330188 GABRG2P18507 467 aa13.57□□□□□ -0.24
TPM3-206ENST00000330188 DNAH14Q0VDD8 3507 aa13.57□□□□□ -0.24
TPM3-206ENST00000330188 CBX3Q13185 183 aa13.57□□□□□ -0.24
TPM3-206ENST00000330188 GPR68Q15743 365 aa13.57□□□□□ -0.24
TPM3-206ENST00000330188 MAPK14Q16539 360 aa13.57□□□□□ -0.24
TPM3-206ENST00000330188 PGGHGQ32M88 737 aa13.57□□□□□ -0.24
TPM3-206ENST00000330188 EIPR1Q53HC9 387 aa13.57□□□□□ -0.24
TPM3-206ENST00000330188 AADACL4Q5VUY2 407 aa13.57□□□□□ -0.24
TPM3-206ENST00000330188 RNF44Q7L0R7 432 aa13.57□□□□□ -0.24
TPM3-206ENST00000330188 LAPTM4BQ86VI4 370 aa13.57□□□□□ -0.24
TPM3-206ENST00000330188 SFTPA2Q8IWL1 248 aa13.57□□□□□ -0.24
TPM3-206ENST00000330188 FLCNQ8NFG4 579 aa13.57□□□□□ -0.24
TPM3-206ENST00000330188 TOR1AIP2Q8NFQ8 470 aa13.57□□□□□ -0.24
TPM3-206ENST00000330188 OR13H1Q8NG92 308 aa13.57□□□□□ -0.24
TPM3-206ENST00000330188 OR5T3Q8NGG3 340 aa13.57□□□□□ -0.24
TPM3-206ENST00000330188 ASB15Q8WXK1 588 aa13.57□□□□□ -0.24
TPM3-206ENST00000330188 TCEAL2Q9H3H9 227 aaPredicted RBP13.57□□□□□ -0.24
TPM3-206ENST00000330188 ISYNA1Q9NPH2 558 aa13.57□□□□□ -0.24
TPM3-206ENST00000330188 POT1Q9NUX5 634 aa13.57□□□□□ -0.24
TPM3-206ENST00000330188 CPNE7Q9UBL6 633 aa13.57□□□□□ -0.24
TPM3-206ENST00000330188 SF3B6Q9Y3B4 125 aaKnown RBP13.57□□□□□ -0.24
TPM3-206ENST00000330188 MN1Q10571 1320 aaPredicted RBP13.56□□□□□ -0.24
TPM3-206ENST00000330188 CDC42EP2O14613 210 aa13.56□□□□□ -0.24
TPM3-206ENST00000330188 CDRT1O95170 752 aa13.56□□□□□ -0.24
TPM3-206ENST00000330188 DLGAP3O95886 979 aa13.56□□□□□ -0.24
TPM3-206ENST00000330188 ATP1B1P05026 303 aa13.56□□□□□ -0.24
TPM3-206ENST00000330188 PTNP21246 168 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 237.2 ms