RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 MLLT3P42568 568 aaPredicted RBP14.37□□□□□ -0.11
BRCC3-201ENST00000330045 MAP2K3P46734 347 aa14.37□□□□□ -0.11
BRCC3-201ENST00000330045 RAB8AP61006 207 aa14.37□□□□□ -0.11
BRCC3-201ENST00000330045 DLX2Q07687 328 aaPredicted RBP14.37□□□□□ -0.11
BRCC3-201ENST00000330045 HYAL1Q12794 435 aa14.37□□□□□ -0.11
BRCC3-201ENST00000330045 DECR1Q16698 335 aa14.37□□□□□ -0.11
BRCC3-201ENST00000330045 METAP1DQ6UB28 335 aaPredicted RBP14.37□□□□□ -0.11
BRCC3-201ENST00000330045 PLET1Q6UQ28 207 aa14.37□□□□□ -0.11
BRCC3-201ENST00000330045 PLEKHM3Q6ZWE6 761 aa14.37□□□□□ -0.11
BRCC3-201ENST00000330045 SIMC1Q8NDZ2 872 aa14.37□□□□□ -0.11
BRCC3-201ENST00000330045 OR52E1Q8NGJ3 308 aa14.37□□□□□ -0.11
BRCC3-201ENST00000330045 NEIL3Q8TAT5 605 aa14.37□□□□□ -0.11
BRCC3-201ENST00000330045 RNF170Q96K19 258 aa14.37□□□□□ -0.11
BRCC3-201ENST00000330045 ATF6BQ99941 703 aa14.37□□□□□ -0.11
BRCC3-201ENST00000330045 GDF15Q99988 308 aa14.37□□□□□ -0.11
BRCC3-201ENST00000330045 SLC28A3Q9HAS3 691 aa14.37□□□□□ -0.11
BRCC3-201ENST00000330045 POLMQ9NP87 494 aaPredicted RBP14.37□□□□□ -0.11
BRCC3-201ENST00000330045 MALT1Q9UDY8 824 aa14.37□□□□□ -0.11
BRCC3-201ENST00000330045 EXOGQ9Y2C4 368 aaKnown RBP14.37□□□□□ -0.11
BRCC3-201ENST00000330045 NTNG1Q9Y2I2 539 aa14.37□□□□□ -0.11
BRCC3-201ENST00000330045 GOLGA4Q13439 2230 aaKnown RBP14.37□□□□□ -0.11
BRCC3-201ENST00000330045 OR52A4PA6NMU1 304 aa14.36□□□□□ -0.11
BRCC3-201ENST00000330045 PROM1O43490 865 aa14.36□□□□□ -0.11
BRCC3-201ENST00000330045 SCO2O43819 266 aa14.36□□□□□ -0.11
BRCC3-201ENST00000330045 FCMRO60667 390 aa14.36□□□□□ -0.11
BRCC3-201ENST00000330045 CPN2P22792 545 aa14.36□□□□□ -0.11
BRCC3-201ENST00000330045 PRKAR1BP31321 381 aa14.36□□□□□ -0.11
BRCC3-201ENST00000330045 ATP6V1E1P36543 226 aa14.36□□□□□ -0.11
BRCC3-201ENST00000330045 GPR4P46093 362 aa14.36□□□□□ -0.11
BRCC3-201ENST00000330045 RGS8P57771 180 aaPredicted RBP14.36□□□□□ -0.11
BRCC3-201ENST00000330045 ACSM1Q08AH1 577 aa14.36□□□□□ -0.11
BRCC3-201ENST00000330045 IL18Q14116 193 aa14.36□□□□□ -0.11
BRCC3-201ENST00000330045 P2RY14Q15391 338 aa14.36□□□□□ -0.11
BRCC3-201ENST00000330045 VITQ6UXI7 678 aa14.36□□□□□ -0.11
BRCC3-201ENST00000330045 FBXL6Q8N531 539 aa14.36□□□□□ -0.11
BRCC3-201ENST00000330045 SRFBP1Q8NEF9 429 aaKnown RBP14.36□□□□□ -0.11
BRCC3-201ENST00000330045 KAT2AQ92830 837 aa14.36□□□□□ -0.11
BRCC3-201ENST00000330045 CHFRQ96EP1 664 aa14.36□□□□□ -0.11
BRCC3-201ENST00000330045 ZNF649Q9BS31 505 aa14.36□□□□□ -0.11
BRCC3-201ENST00000330045 BEX2Q9BXY8 128 aa14.36□□□□□ -0.11
BRCC3-201ENST00000330045 PLSCR3Q9NRY6 295 aa14.36□□□□□ -0.11
BRCC3-201ENST00000330045 MED17Q9NVC6 651 aa14.36□□□□□ -0.11
BRCC3-201ENST00000330045 WDR70Q9NW82 654 aa14.36□□□□□ -0.11
BRCC3-201ENST00000330045 ZNF780BQ9Y6R6 833 aa14.36□□□□□ -0.11
BRCC3-201ENST00000330045 MID1O15344 667 aa14.36□□□□□ -0.11
BRCC3-201ENST00000330045 NCR1O76036 304 aa14.36□□□□□ -0.11
BRCC3-201ENST00000330045 PAK4O96013 591 aaPredicted RBP14.36□□□□□ -0.11
BRCC3-201ENST00000330045 GAAP10253 952 aa14.36□□□□□ -0.11
BRCC3-201ENST00000330045 HLA-DMAP28067 261 aa14.36□□□□□ -0.11
BRCC3-201ENST00000330045 EVX1P49640 407 aa14.36□□□□□ -0.11
BRCC3-201ENST00000330045 ARFIP1P53367 373 aa14.36□□□□□ -0.11
BRCC3-201ENST00000330045 CD83Q01151 205 aa14.36□□□□□ -0.11
BRCC3-201ENST00000330045 IRF4Q15306 451 aa14.36□□□□□ -0.11
BRCC3-201ENST00000330045 PGGHGQ32M88 737 aa14.36□□□□□ -0.11
BRCC3-201ENST00000330045 ZNF791Q3KP31 576 aaPredicted RBP14.36□□□□□ -0.11
BRCC3-201ENST00000330045 AGBL4Q5VU57 503 aa14.36□□□□□ -0.11
BRCC3-201ENST00000330045 NRMQ8IXM6 262 aa14.36□□□□□ -0.11
BRCC3-201ENST00000330045 TMEM145Q8NBT3 493 aa14.36□□□□□ -0.11
BRCC3-201ENST00000330045 OR2L3Q8NG85 312 aa14.36□□□□□ -0.11
BRCC3-201ENST00000330045 SPRYD4Q8WW59 207 aaPredicted RBP14.36□□□□□ -0.11
BRCC3-201ENST00000330045 ZNF681Q96N22 645 aa14.36□□□□□ -0.11
BRCC3-201ENST00000330045 SECISBP2Q96T21 854 aaKnown RBP14.36□□□□□ -0.11
BRCC3-201ENST00000330045 MCHR1Q99705 422 aa14.36□□□□□ -0.11
BRCC3-201ENST00000330045 ACTRT3Q9BYD9 372 aa14.36□□□□□ -0.11
BRCC3-201ENST00000330045 TRIM45Q9H8W5 580 aaPredicted RBP14.36□□□□□ -0.11
BRCC3-201ENST00000330045 H2AFY2Q9P0M6 372 aaPredicted RBP14.36□□□□□ -0.11
BRCC3-201ENST00000330045 DPP7Q9UHL4 492 aa14.36□□□□□ -0.11
BRCC3-201ENST00000330045 PLEKHM1Q9Y4G2 1056 aa14.36□□□□□ -0.11
BRCC3-201ENST00000330045 PCDHGB7Q9Y5F8 929 aa14.36□□□□□ -0.11
BRCC3-201ENST00000330045 ATG2BQ96BY7 2078 aa14.36□□□□□ -0.11
BRCC3-201ENST00000330045 USP34Q70CQ2 3546 aa14.35□□□□□ -0.11
BRCC3-201ENST00000330045 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.35□□□□□ -0.11
BRCC3-201ENST00000330045 SHISA3A0PJX4 238 aa14.35□□□□□ -0.11
BRCC3-201ENST00000330045 PRICKLE3O43900 615 aaPredicted RBP14.35□□□□□ -0.11
BRCC3-201ENST00000330045 ZIC2O95409 532 aaPredicted RBP14.35□□□□□ -0.11
BRCC3-201ENST00000330045 IGHA1P01876 353 aa14.35□□□□□ -0.11
BRCC3-201ENST00000330045 HTR1FP30939 366 aa14.35□□□□□ -0.11
BRCC3-201ENST00000330045 PDX1P52945 283 aa14.35□□□□□ -0.11
BRCC3-201ENST00000330045 ABATP80404 500 aa14.35□□□□□ -0.11
BRCC3-201ENST00000330045 INSL4Q14641 139 aa14.35□□□□□ -0.11
BRCC3-201ENST00000330045 LTB4RQ15722 352 aa14.35□□□□□ -0.11
BRCC3-201ENST00000330045 CEBPEQ15744 281 aa14.35□□□□□ -0.11
BRCC3-201ENST00000330045 MZT2BQ6NZ67 158 aa14.35□□□□□ -0.11
BRCC3-201ENST00000330045 MZT2AQ6P582 158 aa14.35□□□□□ -0.11
BRCC3-201ENST00000330045 BBS1Q8NFJ9 593 aa14.35□□□□□ -0.11
BRCC3-201ENST00000330045 OR52N1Q8NH53 320 aa14.35□□□□□ -0.11
BRCC3-201ENST00000330045 ADAMTS15Q8TE58 950 aa14.35□□□□□ -0.11
BRCC3-201ENST00000330045 GIMAP5Q96F15 307 aa14.35□□□□□ -0.11
BRCC3-201ENST00000330045 SLC41A3Q96GZ6 507 aa14.35□□□□□ -0.11
BRCC3-201ENST00000330045 KXD1Q9BQD3 176 aa14.35□□□□□ -0.11
BRCC3-201ENST00000330045 PHPT1Q9NRX4 125 aaPredicted RBP14.35□□□□□ -0.11
BRCC3-201ENST00000330045 RBFOX1Q9NWB1 397 aaKnown RBP14.35□□□□□ -0.11
BRCC3-201ENST00000330045 THAP10Q9P2Z0 257 aaPredicted RBP14.35□□□□□ -0.11
BRCC3-201ENST00000330045 APOBEC3BQ9UH17 382 aaKnown RBP14.35□□□□□ -0.11
BRCC3-201ENST00000330045 IL20RAQ9UHF4 553 aa14.35□□□□□ -0.11
BRCC3-201ENST00000330045 CBLCQ9ULV8 474 aa14.35□□□□□ -0.11
BRCC3-201ENST00000330045 POLHQ9Y253 713 aa14.35□□□□□ -0.11
BRCC3-201ENST00000330045 CSNK1G3Q9Y6M4 447 aa14.35□□□□□ -0.11
BRCC3-201ENST00000330045 ANKRD34BA5PLL1 514 aa14.35□□□□□ -0.11
BRCC3-201ENST00000330045 SLC2A10O95528 541 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms