RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 CRYZQ08257 329 aaKnown RBP6.69□□□□□ -1.34
SMC1A-201ENST00000322213 PUM1Q14671 1186 aaKnown RBP eCLIP6.69□□□□□ -1.344e-7■■□□□ 12
SMC1A-201ENST00000322213 ENPP7Q6UWV6 458 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 IQCF1Q8N6M8 205 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 ZFP41Q8N8Y5 198 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 OR13C4Q8NGS5 318 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 SYNPRQ8TBG9 265 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 CXorf40AQ8TE69 158 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 RAB40AQ8WXH6 277 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 MARVELD3Q96A59 401 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 RDH14Q9HBH5 336 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 ATG4BQ9Y4P1 393 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 LOC730098B7Z3J9 87 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 HSBP1L1C9JCN9 74 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 RNASET2O00584 256 aaKnown RBP6.69□□□□□ -1.34
SMC1A-201ENST00000322213 TNFRSF10BO14763 440 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 PPP1R2P9O14990 202 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 HTR3BO95264 441 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 FHP07954 510 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 CD63P08962 238 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 GIPP09681 153 aaPredicted RBP6.69□□□□□ -1.34
SMC1A-201ENST00000322213 GLULP15104 373 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 AKR1C4P17516 323 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 CLCN7P51798 805 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 ARHGAP1Q07960 439 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 BATFQ16520 125 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 GLT8D1Q68CQ7 371 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 MAMDC4Q6UXC1 1216 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 PELI3Q8N2H9 469 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 TMEM43Q9BTV4 400 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 FAM212BQ9NTI7 297 aaPredicted RBP6.69□□□□□ -1.34
SMC1A-201ENST00000322213 DUS2Q9NX74 493 aaKnown RBP6.69□□□□□ -1.34
SMC1A-201ENST00000322213 ZNF225Q9UK10 706 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 TREHO43280 583 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 S1PR4O95977 384 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 AMY2AP04746 511 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 IGFALSP35858 605 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 RBMXP38159 391 aaKnown RBP6.69□□□□□ -1.34
SMC1A-201ENST00000322213 ALDH3B1P43353 468 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 RAB13P51153 203 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 SF1Q15637 639 aaKnown RBP6.69□□□□□ -1.34
SMC1A-201ENST00000322213 C21orf62-AS1Q17RA5 79 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 CPZQ66K79 652 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 KIAA1211LQ6NV74 962 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 LETMD1Q6P1Q0 360 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 ABHD13Q7L211 337 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 MYLIPQ8WY64 445 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 FUBP1Q96AE4 644 aaKnown RBP6.69□□□□□ -1.34
SMC1A-201ENST00000322213 SPATA31A5Q5VU36 1347 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 SPATA31A7Q8IWB4 1347 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 HAS3O00219 553 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 MED6O75586 246 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 INHAP05111 366 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 TACR2P21452 398 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 PAX6P26367 422 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 CLCNKBP51801 687 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 GPR143P51810 404 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 SERINC3Q13530 473 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 SYPL2Q5VXT5 272 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 EEF1DP3Q658K8 133 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 FAM180BQ6P0A1 224 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 ZNF585AQ6P3V2 769 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 LINGO4Q6UY18 593 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 TPGS1Q6ZTW0 290 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 LURAP1LQ8IV03 231 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 FBXW5Q969U6 566 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 SLCO4A1Q96BD0 722 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 C14orf79Q96F83 325 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 ALOXE3Q9BYJ1 711 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 KATNBL1Q9H079 304 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 ETV7Q9Y603 341 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 M0R129 80 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 IRAK2O43187 625 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 TPOP07202 933 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 ZNF823P16415 610 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 IL1RNP18510 177 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 CORO1AP31146 461 aaKnown RBP6.69□□□□□ -1.34
SMC1A-201ENST00000322213 TAZQ16635 292 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 FNDC3BQ53EP0 1204 aaKnown RBP6.69□□□□□ -1.34
SMC1A-201ENST00000322213 SLC46A3Q7Z3Q1 461 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 C2orf69Q8N8R5 385 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 ZNF709Q8N972 641 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 SFXN5Q8TD22 340 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 YIPF6Q96EC8 236 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 POFUT1Q9H488 388 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 POT1Q9NUX5 634 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 FBXW2Q9UKT8 454 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 ENPP4Q9Y6X5 453 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 TRIOBPQ9H2D6 2365 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 PTHP01270 115 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 HRGP04196 525 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 SLC35G6P0C7Q6 338 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 ADRB3P13945 408 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 CPEP16870 476 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 AQP2P41181 271 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 MAGEB1P43366 347 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 SLC35A2P78381 396 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 SEMA3BQ13214 749 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 PTPRRQ15256 657 aa6.69□□□□□ -1.34
SMC1A-201ENST00000322213 CYP27C1Q4G0S4 372 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms