RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 SLC38A5Q8WUX1 472 aa14.37□□□□□ -0.11
VARS2-201ENST00000321897 HIST1H2ACQ93077 130 aa14.37□□□□□ -0.11
VARS2-201ENST00000321897 HRASLS5Q96KN8 279 aa14.37□□□□□ -0.11
VARS2-201ENST00000321897 PCBD2Q9H0N5 130 aa14.37□□□□□ -0.11
VARS2-201ENST00000321897 CD93Q9NPY3 652 aa14.37□□□□□ -0.11
VARS2-201ENST00000321897 KCNN3Q9UGI6 736 aa14.37□□□□□ -0.11
VARS2-201ENST00000321897 SPDEFO95238 335 aa14.37□□□□□ -0.11
VARS2-201ENST00000321897 LTB4RQ15722 352 aa14.37□□□□□ -0.11
VARS2-201ENST00000321897 CDKL4Q5MAI5 379 aa14.37□□□□□ -0.11
VARS2-201ENST00000321897 SLC27A4Q6P1M0 643 aa14.37□□□□□ -0.11
VARS2-201ENST00000321897 CEACAM19Q7Z692 300 aa14.37□□□□□ -0.11
VARS2-201ENST00000321897 RANBP3LQ86VV4 465 aaPredicted RBP14.37□□□□□ -0.11
VARS2-201ENST00000321897 POMGNT2Q8NAT1 580 aa14.37□□□□□ -0.11
VARS2-201ENST00000321897 TESCQ96BS2 214 aa14.37□□□□□ -0.11
VARS2-201ENST00000321897 SAMD11Q96NU1 681 aa14.37□□□□□ -0.11
VARS2-201ENST00000321897 OR4K3Q96R72 315 aa14.37□□□□□ -0.11
VARS2-201ENST00000321897 BHLHE41Q9C0J9 482 aaPredicted RBP14.37□□□□□ -0.11
VARS2-201ENST00000321897 PNO1Q9NRX1 252 aaKnown RBP14.37□□□□□ -0.11
VARS2-201ENST00000321897 POT1Q9NUX5 634 aa14.37□□□□□ -0.11
VARS2-201ENST00000321897 NDUFAF4Q9P032 175 aa14.37□□□□□ -0.11
VARS2-201ENST00000321897 KCMF1Q9P0J7 381 aa14.37□□□□□ -0.11
VARS2-201ENST00000321897 GNSP15586 552 aa14.37□□□□□ -0.11
VARS2-201ENST00000321897 RPS25P62851 125 aaKnown RBP14.37□□□□□ -0.11
VARS2-201ENST00000321897 IFITM2Q01629 132 aa14.37□□□□□ -0.11
VARS2-201ENST00000321897 C18orf63Q68DL7 685 aa14.37□□□□□ -0.11
VARS2-201ENST00000321897 VRK2Q86Y07 508 aa14.37□□□□□ -0.11
VARS2-201ENST00000321897 SERPINA12Q8IW75 414 aa14.37□□□□□ -0.11
VARS2-201ENST00000321897 CNOT1A5YKK6 2376 aaKnown RBP14.37□□□□□ -0.11
VARS2-201ENST00000321897 CCDC88CQ9P219 2028 aa14.37□□□□□ -0.11
VARS2-201ENST00000321897 IRGMA1A4Y4 181 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 PROM1O43490 865 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 FZD6O60353 706 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 ZNF780AO75290 641 aaPredicted RBP14.36□□□□□ -0.11
VARS2-201ENST00000321897 PYCR1P32322 319 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 MTNR1AP48039 350 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 RRAS2P62070 204 aaPredicted RBP14.36□□□□□ -0.11
VARS2-201ENST00000321897 ST3GAL3Q11203 375 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 OR4C11Q6IEV9 310 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 PLBD1Q6P4A8 553 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 SYNPOQ8N3V7 929 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 THAP3Q8WTV1 239 aaPredicted RBP14.36□□□□□ -0.11
VARS2-201ENST00000321897 RLN3Q8WXF3 142 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 TREX2Q9BQ50 279 aaPredicted RBP14.36□□□□□ -0.11
VARS2-201ENST00000321897 OR51J1Q9H342 316 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 NARFLQ9H6Q4 476 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 ATPIF1Q9UII2 106 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 EDARQ9UNE0 448 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 SH2B3Q9UQQ2 575 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 CACNA1GO43497 2377 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 B4DXG7 233 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 PRKNO60260 465 aaPredicted RBP14.36□□□□□ -0.11
VARS2-201ENST00000321897 LATS1O95835 1130 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 HK1P19367 917 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 MLLT3P42568 568 aaPredicted RBP14.36□□□□□ -0.11
VARS2-201ENST00000321897 CAMK2BQ13554 666 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 TOR2AQ5JU69 321 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 MPP7Q5T2T1 576 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 NLRP8Q86W28 1048 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 C12orf40Q86WS4 652 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 LGR4Q9BXB1 951 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 KIF13BQ9NQT8 1826 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 SIRT5Q9NXA8 310 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 DOCK6Q96HP0 2047 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 ARPC4-TTLL3A0A0A6YYG9 625 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 TIMP1P01033 207 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 CD22P20273 847 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 MNDAP41218 407 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 PRLHRP49683 370 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 SHC2P98077 582 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 GALK2Q01415 458 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 EIF4HQ15056 248 aaKnown RBP14.36□□□□□ -0.11
VARS2-201ENST00000321897 ZNF776Q68DI1 518 aaPredicted RBP14.36□□□□□ -0.11
VARS2-201ENST00000321897 CPXM2Q8N436 756 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 NLGN4YQ8NFZ3 816 aaPredicted RBP14.36□□□□□ -0.11
VARS2-201ENST00000321897 TPSD1Q9BZJ3 242 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 NDRG4Q9ULP0 352 aaKnown RBP14.36□□□□□ -0.11
VARS2-201ENST00000321897 MGAT4BQ9UQ53 548 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 M0R082 166 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 RNGTTO60942 597 aaKnown RBP14.36□□□□□ -0.11
VARS2-201ENST00000321897 PTPN6P29350 595 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 FAM78AQ5JUQ0 283 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 GRAMD2AQ8IUY3 354 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 OR8S1Q8NH09 359 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 DPH1Q9BZG8 443 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 TREM1Q9NP99 234 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 SLC23A2Q9UGH3 650 aa14.36□□□□□ -0.11
VARS2-201ENST00000321897 CTSLP07711 333 aa14.35□□□□□ -0.11
VARS2-201ENST00000321897 TFPIP10646 304 aa14.35□□□□□ -0.11
VARS2-201ENST00000321897 HSD3B1P14060 373 aa14.35□□□□□ -0.11
VARS2-201ENST00000321897 HSD3B2P26439 372 aa14.35□□□□□ -0.11
VARS2-201ENST00000321897 AHRP35869 848 aa14.35□□□□□ -0.11
VARS2-201ENST00000321897 RPS5P46782 204 aaKnown RBP14.35□□□□□ -0.11
VARS2-201ENST00000321897 RAB28P51157 221 aa14.35□□□□□ -0.11
VARS2-201ENST00000321897 CDK3Q00526 305 aa14.35□□□□□ -0.11
VARS2-201ENST00000321897 DSG2Q14126 1118 aa14.35□□□□□ -0.11
VARS2-201ENST00000321897 ERV3-1Q14264 604 aa14.35□□□□□ -0.11
VARS2-201ENST00000321897 TANGO2Q6ICL3 276 aa14.35□□□□□ -0.11
VARS2-201ENST00000321897 SLC9B2Q86UD5 537 aa14.35□□□□□ -0.11
VARS2-201ENST00000321897 ACOT4Q8N9L9 421 aa14.35□□□□□ -0.11
VARS2-201ENST00000321897 OR4F15Q8NGB8 312 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms