RNA–Protein interactions for RNA: ENST00000321895.6

CCDC71-201, Transcript of coiled-coil domain containing 71, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC71, Length 1,781 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71-201ENST00000321895 VPS50Q96JG6 964 aa18.2■□□□□ 0.5
CCDC71-201ENST00000321895 PCDHGA10Q9Y5H3 936 aa18.2■□□□□ 0.5
CCDC71-201ENST00000321895 WDFY3Q8IZQ1 3526 aa18.2■□□□□ 0.5
CCDC71-201ENST00000321895 SYT5O00445 386 aa18.19■□□□□ 0.5
CCDC71-201ENST00000321895 CASQ2O14958 399 aaPredicted RBP18.19■□□□□ 0.5
CCDC71-201ENST00000321895 LDLRP01130 860 aa18.19■□□□□ 0.5
CCDC71-201ENST00000321895 DBIP07108 87 aaKnown RBP18.19■□□□□ 0.5
CCDC71-201ENST00000321895 OTX2P32243 289 aa18.19■□□□□ 0.5
CCDC71-201ENST00000321895 GCKP35557 465 aa18.19■□□□□ 0.5
CCDC71-201ENST00000321895 RFX3P48380 749 aa18.19■□□□□ 0.5
CCDC71-201ENST00000321895 NR0B1P51843 470 aaKnown RBP18.19■□□□□ 0.5
CCDC71-201ENST00000321895 PSMD4P55036 377 aaKnown RBP18.19■□□□□ 0.5
CCDC71-201ENST00000321895 KCNC4Q03721 635 aa18.19■□□□□ 0.5
CCDC71-201ENST00000321895 LARS2Q15031 903 aaKnown RBP18.19■□□□□ 0.5
CCDC71-201ENST00000321895 BTBD16Q32M84 506 aa18.19■□□□□ 0.5
CCDC71-201ENST00000321895 ZAR1Q86SH2 424 aa18.19■□□□□ 0.5
CCDC71-201ENST00000321895 M1APQ8TC57 530 aa18.19■□□□□ 0.5
CCDC71-201ENST00000321895 ELP5Q8TE02 316 aa18.19■□□□□ 0.5
CCDC71-201ENST00000321895 CENPNQ96H22 339 aaPredicted RBP18.19■□□□□ 0.5
CCDC71-201ENST00000321895 ZNF232Q9UNY5 417 aa18.19■□□□□ 0.5
CCDC71-201ENST00000321895 ZNF443Q9Y2A4 671 aaPredicted RBP18.19■□□□□ 0.5
CCDC71-201ENST00000321895 SH3GLB1Q9Y371 365 aa18.19■□□□□ 0.5
CCDC71-201ENST00000321895 NSG1A0A0A6YYJ2 146 aa18.19■□□□□ 0.5
CCDC71-201ENST00000321895 CLOCKO15516 846 aa18.19■□□□□ 0.5
CCDC71-201ENST00000321895 PRKNO60260 465 aaPredicted RBP18.19■□□□□ 0.5
CCDC71-201ENST00000321895 ZFAND5O76080 213 aa18.19■□□□□ 0.5
CCDC71-201ENST00000321895 IL33O95760 270 aa18.19■□□□□ 0.5
CCDC71-201ENST00000321895 PTDSS1P48651 473 aaKnown RBP18.19■□□□□ 0.5
CCDC71-201ENST00000321895 HMGN2P46Q86SG4 172 aa18.19■□□□□ 0.5
CCDC71-201ENST00000321895 AMIGO2Q86SJ2 522 aa18.19■□□□□ 0.5
CCDC71-201ENST00000321895 VRK2Q86Y07 508 aa18.19■□□□□ 0.5
CCDC71-201ENST00000321895 DNAJB9Q9UBS3 223 aa18.19■□□□□ 0.5
CCDC71-201ENST00000321895 UGT2B17O75795 530 aa18.18■□□□□ 0.5
CCDC71-201ENST00000321895 LGI1O95970 557 aa18.18■□□□□ 0.5
CCDC71-201ENST00000321895 CST1P01037 141 aa18.18■□□□□ 0.5
CCDC71-201ENST00000321895 IL7RP16871 459 aa18.18■□□□□ 0.5
CCDC71-201ENST00000321895 ITGA2P17301 1181 aa18.18■□□□□ 0.5
CCDC71-201ENST00000321895 TNFRSF1BP20333 461 aa18.18■□□□□ 0.5
CCDC71-201ENST00000321895 LCN1P31025 176 aa18.18■□□□□ 0.5
CCDC71-201ENST00000321895 OR1E2P47887 323 aa18.18■□□□□ 0.5
CCDC71-201ENST00000321895 PUM1Q14671 1186 aaKnown RBP eCLIP18.18■□□□□ 0.5
CCDC71-201ENST00000321895 TRIP10Q15642 601 aa18.18■□□□□ 0.5
CCDC71-201ENST00000321895 IQCCQ4KMZ1 466 aa18.18■□□□□ 0.5
CCDC71-201ENST00000321895 LIN52Q52LA3 116 aa18.18■□□□□ 0.5
CCDC71-201ENST00000321895 EIPR1Q53HC9 387 aa18.18■□□□□ 0.5
CCDC71-201ENST00000321895 RAB43Q86YS6 212 aa18.18■□□□□ 0.5
CCDC71-201ENST00000321895 SLC34A3Q8N130 599 aa18.18■□□□□ 0.5
CCDC71-201ENST00000321895 OIT3Q8WWZ8 545 aa18.18■□□□□ 0.5
CCDC71-201ENST00000321895 TMBIM1Q969X1 311 aa18.18■□□□□ 0.5
CCDC71-201ENST00000321895 LMF1Q96S06 567 aa18.18■□□□□ 0.5
CCDC71-201ENST00000321895 BDH2Q9BUT1 245 aa18.18■□□□□ 0.5
CCDC71-201ENST00000321895 SEMA6AQ9H2E6 1030 aa18.18■□□□□ 0.5
CCDC71-201ENST00000321895 MMP25Q9NPA2 562 aa18.18■□□□□ 0.5
CCDC71-201ENST00000321895 KCNE5Q9UJ90 142 aa18.18■□□□□ 0.5
CCDC71-201ENST00000321895 SLC9A8Q9Y2E8 581 aa18.18■□□□□ 0.5
CCDC71-201ENST00000321895 CFAP54Q96N23 3096 aa18.18■□□□□ 0.5
CCDC71-201ENST00000321895 CDC14CA4D256 554 aa18.17■□□□□ 0.5
CCDC71-201ENST00000321895 NPIPB9F8W1W9 429 aa18.17■□□□□ 0.5
CCDC71-201ENST00000321895 hCG_2039718K7EN88 272 aa18.17■□□□□ 0.5
CCDC71-201ENST00000321895 PEX12O00623 359 aa18.17■□□□□ 0.5
CCDC71-201ENST00000321895 IFNW1P05000 195 aa18.17■□□□□ 0.5
CCDC71-201ENST00000321895 LIPCP11150 499 aa18.17■□□□□ 0.5
CCDC71-201ENST00000321895 NID1P14543 1247 aa18.17■□□□□ 0.5
CCDC71-201ENST00000321895 KRT20P35900 424 aa18.17■□□□□ 0.5
CCDC71-201ENST00000321895 NRG3P56975 720 aa18.17■□□□□ 0.5
CCDC71-201ENST00000321895 PLCXD2Q0VAA5 305 aa18.17■□□□□ 0.5
CCDC71-201ENST00000321895 ZNF141Q15928 474 aa18.17■□□□□ 0.5
CCDC71-201ENST00000321895 MAPK14Q16539 360 aa18.17■□□□□ 0.5
CCDC71-201ENST00000321895 AMER2Q8N7J2 671 aa18.17■□□□□ 0.5
CCDC71-201ENST00000321895 NRG4Q8WWG1 115 aa18.17■□□□□ 0.5
CCDC71-201ENST00000321895 DIO2Q92813 273 aa18.17■□□□□ 0.5
CCDC71-201ENST00000321895 KIAA1143Q96AT1 154 aaPredicted RBP18.17■□□□□ 0.5
CCDC71-201ENST00000321895 SLC13A4Q9UKG4 626 aa18.17■□□□□ 0.5
CCDC71-201ENST00000321895 ABCG2Q9UNQ0 655 aa18.17■□□□□ 0.5
CCDC71-201ENST00000321895 NPIPA5A0A0B4J1W7 369 aa18.17■□□□□ 0.5
CCDC71-201ENST00000321895 CENPVL1A0A0U1RR11 272 aa18.17■□□□□ 0.5
CCDC71-201ENST00000321895 PRAMEF25A6NGN4 478 aa18.17■□□□□ 0.5
CCDC71-201ENST00000321895 NPIPA7E9PJI5 369 aa18.17■□□□□ 0.5
CCDC71-201ENST00000321895 PRSS23O95084 383 aa18.17■□□□□ 0.5
CCDC71-201ENST00000321895 EPPINO95925 133 aa18.17■□□□□ 0.5
CCDC71-201ENST00000321895 HPP00738 406 aa18.17■□□□□ 0.5
CCDC71-201ENST00000321895 NPIPA8P0DM63 369 aa18.17■□□□□ 0.5
CCDC71-201ENST00000321895 DCTP40126 519 aa18.17■□□□□ 0.5
CCDC71-201ENST00000321895 ATP12AP54707 1039 aa18.17■□□□□ 0.5
CCDC71-201ENST00000321895 IL10RAQ13651 578 aa18.17■□□□□ 0.5
CCDC71-201ENST00000321895 RNF220Q5VTB9 566 aa18.17■□□□□ 0.5
CCDC71-201ENST00000321895 ZNF836Q6ZNA1 936 aa18.17■□□□□ 0.5
CCDC71-201ENST00000321895 MRGPREQ86SM8 312 aa18.17■□□□□ 0.5
CCDC71-201ENST00000321895 COMTD1Q86VU5 262 aa18.17■□□□□ 0.5
CCDC71-201ENST00000321895 CARM1Q86X55 608 aa18.17■□□□□ 0.5
CCDC71-201ENST00000321895 EFHD2Q96C19 240 aaPredicted RBP18.17■□□□□ 0.5
CCDC71-201ENST00000321895 NXPE2Q96DL1 559 aa18.17■□□□□ 0.5
CCDC71-201ENST00000321895 DEFB126Q9BYW3 111 aa18.17■□□□□ 0.5
CCDC71-201ENST00000321895 HOXD1Q9GZZ0 328 aa18.17■□□□□ 0.5
CCDC71-201ENST00000321895 GPN2Q9H9Y4 310 aaPredicted RBP18.17■□□□□ 0.5
CCDC71-201ENST00000321895 KLHL28Q9NXS3 571 aa18.17■□□□□ 0.5
CCDC71-201ENST00000321895 NDUFAF4Q9P032 175 aa18.17■□□□□ 0.5
CCDC71-201ENST00000321895 AK5Q9Y6K8 562 aa18.17■□□□□ 0.5
CCDC71-201ENST00000321895 TMEM200CA6NKL6 621 aa18.16■□□□□ 0.5
CCDC71-201ENST00000321895 DPM1O60762 260 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms