RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 SURF4O15260 269 aa16.76■□□□□ 0.27
PRKCB-202ENST00000321728 SLC2A10O95528 541 aa16.76■□□□□ 0.27
PRKCB-202ENST00000321728 HOXD4P09016 255 aaPredicted RBP16.76■□□□□ 0.27
PRKCB-202ENST00000321728 DBPQ10586 325 aaPredicted RBP16.76■□□□□ 0.27
PRKCB-202ENST00000321728 BTN1A1Q13410 526 aa16.76■□□□□ 0.27
PRKCB-202ENST00000321728 GPNMBQ14956 572 aa16.76■□□□□ 0.27
PRKCB-202ENST00000321728 GSG1Q2KHT4 349 aa16.76■□□□□ 0.27
PRKCB-202ENST00000321728 HENMT1Q5T8I9 393 aaKnown RBP16.76■□□□□ 0.27
PRKCB-202ENST00000321728 KIAA1324Q6UXG2 1013 aaKnown RBP16.76■□□□□ 0.27
PRKCB-202ENST00000321728 ZNF687Q8N1G0 1237 aa16.76■□□□□ 0.27
PRKCB-202ENST00000321728 SIRT6Q8N6T7 355 aa16.76■□□□□ 0.27
PRKCB-202ENST00000321728 ADAMTS14Q8WXS8 1223 aa16.76■□□□□ 0.27
PRKCB-202ENST00000321728 RIT1Q92963 219 aa16.76■□□□□ 0.27
PRKCB-202ENST00000321728 GLYATL1Q969I3 302 aa16.76■□□□□ 0.27
PRKCB-202ENST00000321728 COQ10AQ96MF6 247 aa16.76■□□□□ 0.27
PRKCB-202ENST00000321728 SMAD5Q99717 465 aaKnown RBP16.76■□□□□ 0.27
PRKCB-202ENST00000321728 TMEM175Q9BSA9 504 aa16.76■□□□□ 0.27
PRKCB-202ENST00000321728 SPATA5L1Q9BVQ7 753 aa16.76■□□□□ 0.27
PRKCB-202ENST00000321728 C1QTNF6Q9BXI9 259 aa16.76■□□□□ 0.27
PRKCB-202ENST00000321728 LIN7BQ9HAP6 207 aa16.76■□□□□ 0.27
PRKCB-202ENST00000321728 HS3ST2Q9Y278 367 aa16.76■□□□□ 0.27
PRKCB-202ENST00000321728 RWDD3Q9Y3V2 267 aa16.76■□□□□ 0.27
PRKCB-202ENST00000321728 FAM183AA6NL82 134 aa16.76■□□□□ 0.27
PRKCB-202ENST00000321728 CPSF4LA6NMK7 179 aaKnown RBP16.76■□□□□ 0.27
PRKCB-202ENST00000321728 IGHA1P01876 353 aa16.76■□□□□ 0.27
PRKCB-202ENST00000321728 SULT1A3P0DMM9 295 aa16.76■□□□□ 0.27
PRKCB-202ENST00000321728 SULT1A4P0DMN0 295 aa16.76■□□□□ 0.27
PRKCB-202ENST00000321728 PEPDP12955 493 aa16.76■□□□□ 0.27
PRKCB-202ENST00000321728 PTGER1P34995 402 aa16.76■□□□□ 0.27
PRKCB-202ENST00000321728 THBS2P35442 1172 aa16.76■□□□□ 0.27
PRKCB-202ENST00000321728 MAP2K6P52564 334 aa16.76■□□□□ 0.27
PRKCB-202ENST00000321728 FAM83HQ6ZRV2 1179 aaPredicted RBP16.76■□□□□ 0.27
PRKCB-202ENST00000321728 RASSF6Q6ZTQ3 369 aa16.76■□□□□ 0.27
PRKCB-202ENST00000321728 ZBTB44Q8NCP5 570 aa16.76■□□□□ 0.27
PRKCB-202ENST00000321728 IL17FQ96PD4 163 aa16.76■□□□□ 0.27
PRKCB-202ENST00000321728 ZCCHC3Q9NUD5 404 aaKnown RBP16.76■□□□□ 0.27
PRKCB-202ENST00000321728 RNF186Q9NXI6 227 aa16.76■□□□□ 0.27
PRKCB-202ENST00000321728 NKIRAS2Q9NYR9 191 aa16.76■□□□□ 0.27
PRKCB-202ENST00000321728 SLC25A13Q9UJS0 675 aa16.76■□□□□ 0.27
PRKCB-202ENST00000321728 LIPT1Q9Y234 373 aa16.76■□□□□ 0.27
PRKCB-202ENST00000321728 EXOGQ9Y2C4 368 aaKnown RBP16.76■□□□□ 0.27
PRKCB-202ENST00000321728 CASC3O15234 703 aaKnown RBP16.75■□□□□ 0.27
PRKCB-202ENST00000321728 MT-ND4P03905 459 aa16.75■□□□□ 0.27
PRKCB-202ENST00000321728 DRD5P21918 477 aa16.75■□□□□ 0.27
PRKCB-202ENST00000321728 LCN1P31025 176 aa16.75■□□□□ 0.27
PRKCB-202ENST00000321728 MMP12P39900 470 aa16.75■□□□□ 0.27
PRKCB-202ENST00000321728 PCBP4P57723 403 aaKnown RBP16.75■□□□□ 0.27
PRKCB-202ENST00000321728 CDC73Q6P1J9 531 aa16.75■□□□□ 0.27
PRKCB-202ENST00000321728 ARL9Q6T311 187 aa16.75■□□□□ 0.27
PRKCB-202ENST00000321728 ARSKQ6UWY0 536 aa16.75■□□□□ 0.27
PRKCB-202ENST00000321728 TRMT11Q7Z4G4 463 aaKnown RBP16.75■□□□□ 0.27
PRKCB-202ENST00000321728 PCSK9Q8NBP7 692 aaKnown RBP16.75■□□□□ 0.27
PRKCB-202ENST00000321728 KLK6Q92876 244 aa16.75■□□□□ 0.27
PRKCB-202ENST00000321728 KCTD12Q96CX2 325 aaKnown RBP16.75■□□□□ 0.27
PRKCB-202ENST00000321728 ERMAPQ96PL5 475 aaPredicted RBP16.75■□□□□ 0.27
PRKCB-202ENST00000321728 SLC9B1P1A6NJY1 282 aa16.75■□□□□ 0.27
PRKCB-202ENST00000321728 CTSAP10619 480 aa16.75■□□□□ 0.27
PRKCB-202ENST00000321728 HTR1FP30939 366 aa16.75■□□□□ 0.27
PRKCB-202ENST00000321728 GPR4P46093 362 aa16.75■□□□□ 0.27
PRKCB-202ENST00000321728 RNF144AP50876 292 aaPredicted RBP16.75■□□□□ 0.27
PRKCB-202ENST00000321728 PIP5KL1Q5T9C9 394 aa16.75■□□□□ 0.27
PRKCB-202ENST00000321728 TMEM81Q6P7N7 255 aa16.75■□□□□ 0.27
PRKCB-202ENST00000321728 KANSL1Q7Z3B3 1105 aa16.75■□□□□ 0.27
PRKCB-202ENST00000321728 KRT78Q8N1N4 520 aa16.75■□□□□ 0.27
PRKCB-202ENST00000321728 OSTF1Q92882 214 aa16.75■□□□□ 0.27
PRKCB-202ENST00000321728 PPP1R16AQ96I34 528 aa16.75■□□□□ 0.27
PRKCB-202ENST00000321728 METTL17Q9H7H0 456 aaPredicted RBP16.75■□□□□ 0.27
PRKCB-202ENST00000321728 LYARQ9NX58 379 aaKnown RBP16.75■□□□□ 0.27
PRKCB-202ENST00000321728 BABAM2Q9NXR7 383 aa16.75■□□□□ 0.27
PRKCB-202ENST00000321728 HCN3Q9P1Z3 774 aa16.75■□□□□ 0.27
PRKCB-202ENST00000321728 COPZ2Q9P299 210 aa16.75■□□□□ 0.27
PRKCB-202ENST00000321728 PLAGL1Q9UM63 463 aa16.75■□□□□ 0.27
PRKCB-202ENST00000321728 SPATA2Q9UM82 520 aa16.75■□□□□ 0.27
PRKCB-202ENST00000321728 SLC9A3R1O14745 358 aaPredicted RBP16.74■□□□□ 0.27
PRKCB-202ENST00000321728 CHRM4P08173 479 aa16.74■□□□□ 0.27
PRKCB-202ENST00000321728 GALP22466 123 aa16.74■□□□□ 0.27
PRKCB-202ENST00000321728 DGCR2P98153 550 aa16.74■□□□□ 0.27
PRKCB-202ENST00000321728 FZD5Q13467 585 aa16.74■□□□□ 0.27
PRKCB-202ENST00000321728 TMEM44Q2T9K0 475 aa16.74■□□□□ 0.27
PRKCB-202ENST00000321728 PRAMEF14Q5SWL7 426 aa16.74■□□□□ 0.27
PRKCB-202ENST00000321728 SPOUT1Q5T280 376 aaKnown RBP16.74■□□□□ 0.27
PRKCB-202ENST00000321728 PRAMEF13Q5VWM6 474 aa16.74■□□□□ 0.27
PRKCB-202ENST00000321728 KHDRBS2Q5VWX1 349 aaKnown RBP16.74■□□□□ 0.27
PRKCB-202ENST00000321728 MTFR2Q6P444 385 aa16.74■□□□□ 0.27
PRKCB-202ENST00000321728 DEFB128Q7Z7B8 93 aa16.74■□□□□ 0.27
PRKCB-202ENST00000321728 RNF180Q86T96 592 aa16.74■□□□□ 0.27
PRKCB-202ENST00000321728 CPOQ8IVL8 374 aa16.74■□□□□ 0.27
PRKCB-202ENST00000321728 RPLP0P6Q8NHW5 317 aa16.74■□□□□ 0.27
PRKCB-202ENST00000321728 PIGXQ8TBF5 258 aa16.74■□□□□ 0.27
PRKCB-202ENST00000321728 KCMF1Q9P0J7 381 aa16.74■□□□□ 0.27
PRKCB-202ENST00000321728 SLC13A4Q9UKG4 626 aa16.74■□□□□ 0.27
PRKCB-202ENST00000321728 CHST2Q9Y4C5 530 aa16.74■□□□□ 0.27
PRKCB-202ENST00000321728 RNF215Q9Y6U7 377 aa16.74■□□□□ 0.27
PRKCB-202ENST00000321728 ACSM4P0C7M7 580 aa16.74■□□□□ 0.27
PRKCB-202ENST00000321728 PAICSP22234 425 aaKnown RBP16.74■□□□□ 0.27
PRKCB-202ENST00000321728 IL32P24001 234 aa16.74■□□□□ 0.27
PRKCB-202ENST00000321728 RECQLP46063 649 aaPredicted RBP16.74■□□□□ 0.27
PRKCB-202ENST00000321728 HACD4Q5VWC8 232 aa16.74■□□□□ 0.27
PRKCB-202ENST00000321728 TRAPPC5Q8IUR0 188 aa16.74■□□□□ 0.27
PRKCB-202ENST00000321728 YIPF5Q969M3 257 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms