RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 TWIST2Q8WVJ9 160 aa16.09■□□□□ 0.17
TPM1-203ENST00000317516 PPP3R2Q96LZ3 170 aa16.09■□□□□ 0.17
TPM1-203ENST00000317516 TBL1XR1Q9BZK7 514 aa16.09■□□□□ 0.17
TPM1-203ENST00000317516 PIGMQ9H3S5 423 aa16.09■□□□□ 0.17
TPM1-203ENST00000317516 MED11Q9P086 117 aa16.09■□□□□ 0.17
TPM1-203ENST00000317516 BAIAP2L1Q9UHR4 511 aa16.09■□□□□ 0.17
TPM1-203ENST00000317516 SPG11Q96JI7 2443 aa16.08■□□□□ 0.17
TPM1-203ENST00000317516 NCKAP5O14513 1909 aa16.08■□□□□ 0.16
TPM1-203ENST00000317516 SPAG7O75391 227 aa16.08■□□□□ 0.16
TPM1-203ENST00000317516 CHRNGP07510 517 aa16.08■□□□□ 0.16
TPM1-203ENST00000317516 CD1EP15812 388 aa16.08■□□□□ 0.16
TPM1-203ENST00000317516 TCEA1P23193 301 aaKnown RBP16.08■□□□□ 0.16
TPM1-203ENST00000317516 DIO3P55073 304 aa16.08■□□□□ 0.16
TPM1-203ENST00000317516 CLDN18P56856 261 aa16.08■□□□□ 0.16
TPM1-203ENST00000317516 STX5Q13190 355 aa16.08■□□□□ 0.16
TPM1-203ENST00000317516 TESK1Q15569 626 aa16.08■□□□□ 0.16
TPM1-203ENST00000317516 RAET1LQ5VY80 246 aa16.08■□□□□ 0.16
TPM1-203ENST00000317516 ANKRD26P1Q6NSI1 321 aa16.08■□□□□ 0.16
TPM1-203ENST00000317516 ZCCHC12Q6PEW1 402 aa16.08■□□□□ 0.16
TPM1-203ENST00000317516 SPNS3Q6ZMD2 512 aa16.08■□□□□ 0.16
TPM1-203ENST00000317516 P4HA3Q7Z4N8 544 aa16.08■□□□□ 0.16
TPM1-203ENST00000317516 NUP43Q8NFH3 380 aa16.08■□□□□ 0.16
TPM1-203ENST00000317516 TCP10LQ8TDR4 215 aa16.08■□□□□ 0.16
TPM1-203ENST00000317516 CIDECQ96AQ7 238 aaPredicted RBP16.08■□□□□ 0.16
TPM1-203ENST00000317516 INTS12Q96CB8 462 aaKnown RBP16.08■□□□□ 0.16
TPM1-203ENST00000317516 PIGQQ9BRB3 760 aa16.08■□□□□ 0.16
TPM1-203ENST00000317516 CLEC4MQ9H2X3 399 aaPredicted RBP16.08■□□□□ 0.16
TPM1-203ENST00000317516 EQTNQ9NQ60 294 aa16.08■□□□□ 0.16
TPM1-203ENST00000317516 RASSF1Q9NS23 344 aa16.08■□□□□ 0.16
TPM1-203ENST00000317516 JKAMPQ9P055 326 aa16.08■□□□□ 0.16
TPM1-203ENST00000317516 SLC17A7Q9P2U7 560 aa16.08■□□□□ 0.16
TPM1-203ENST00000317516 STOML1Q9UBI4 398 aa16.08■□□□□ 0.16
TPM1-203ENST00000317516 A6NNC1 897 aa16.07■□□□□ 0.16
TPM1-203ENST00000317516 EMC8O43402 210 aa16.07■□□□□ 0.16
TPM1-203ENST00000317516 NKX2-2O95096 273 aa16.07■□□□□ 0.16
TPM1-203ENST00000317516 UTS2O95399 124 aa16.07■□□□□ 0.16
TPM1-203ENST00000317516 EPXP11678 715 aa16.07■□□□□ 0.16
TPM1-203ENST00000317516 BCKDHAP12694 445 aa16.07■□□□□ 0.16
TPM1-203ENST00000317516 HPCAL1P37235 193 aa16.07■□□□□ 0.16
TPM1-203ENST00000317516 FRKP42685 505 aaPredicted RBP16.07■□□□□ 0.16
TPM1-203ENST00000317516 CPA2P48052 419 aa16.07■□□□□ 0.16
TPM1-203ENST00000317516 PRR5P85299 388 aa16.07■□□□□ 0.16
TPM1-203ENST00000317516 PDE7AQ13946 482 aa16.07■□□□□ 0.16
TPM1-203ENST00000317516 DAZAP2Q15038 168 aaPredicted RBP16.07■□□□□ 0.16
TPM1-203ENST00000317516 UGT3A2Q3SY77 523 aa16.07■□□□□ 0.16
TPM1-203ENST00000317516 GLYR1Q49A26 553 aaPredicted RBP16.07■□□□□ 0.16
TPM1-203ENST00000317516 FBXW10Q5XX13 1052 aa16.07■□□□□ 0.16
TPM1-203ENST00000317516 OR2A2Q6IF42 318 aa16.07■□□□□ 0.16
TPM1-203ENST00000317516 SZRD1Q7Z422 152 aa16.07■□□□□ 0.16
TPM1-203ENST00000317516 MARCH3Q86UD3 253 aa16.07■□□□□ 0.16
TPM1-203ENST00000317516 CLHC1Q8NHS4 586 aa16.07■□□□□ 0.16
TPM1-203ENST00000317516 SLC9A6Q92581 669 aa16.07■□□□□ 0.16
TPM1-203ENST00000317516 RMND5BQ96G75 393 aaPredicted RBP16.07■□□□□ 0.16
TPM1-203ENST00000317516 GPATCH1Q9BRR8 931 aaKnown RBP16.07■□□□□ 0.16
TPM1-203ENST00000317516 MECRQ9BV79 373 aa16.07■□□□□ 0.16
TPM1-203ENST00000317516 RBM24Q9BX46 236 aaKnown RBP16.07■□□□□ 0.16
TPM1-203ENST00000317516 NTMQ9P121 344 aa16.07■□□□□ 0.16
TPM1-203ENST00000317516 CLCF1Q9UBD9 225 aa16.07■□□□□ 0.16
TPM1-203ENST00000317516 FREM3P0C091 2139 aa16.06■□□□□ 0.16
TPM1-203ENST00000317516 GXYLT2A0PJZ3 443 aa16.06■□□□□ 0.16
TPM1-203ENST00000317516 FAM221AA4D161 298 aa16.06■□□□□ 0.16
TPM1-203ENST00000317516 PIP5K1BO14986 540 aa16.06■□□□□ 0.16
TPM1-203ENST00000317516 ANGPTL1O95841 491 aa16.06■□□□□ 0.16
TPM1-203ENST00000317516 CRHP06850 196 aa16.06■□□□□ 0.16
TPM1-203ENST00000317516 DNAJA1P31689 397 aaKnown RBP16.06■□□□□ 0.16
TPM1-203ENST00000317516 B3GALT5-AS1P59052 145 aa16.06■□□□□ 0.16
TPM1-203ENST00000317516 FOXF2Q12947 444 aa16.06■□□□□ 0.16
TPM1-203ENST00000317516 MLC1Q15049 377 aa16.06■□□□□ 0.16
TPM1-203ENST00000317516 ATP6AP1LQ52LC2 224 aa16.06■□□□□ 0.16
TPM1-203ENST00000317516 ZNF385BQ569K4 471 aa16.06■□□□□ 0.16
TPM1-203ENST00000317516 WDR93Q6P2C0 686 aa16.06■□□□□ 0.16
TPM1-203ENST00000317516 NATD1Q8N6N6 113 aa16.06■□□□□ 0.16
TPM1-203ENST00000317516 OR6Y1Q8NGX8 325 aa16.06■□□□□ 0.16
TPM1-203ENST00000317516 AGR3Q8TD06 166 aa16.06■□□□□ 0.16
TPM1-203ENST00000317516 AENQ8WTP8 325 aaKnown RBP16.06■□□□□ 0.16
TPM1-203ENST00000317516 PIK3R3Q92569 461 aa16.06■□□□□ 0.16
TPM1-203ENST00000317516 HOXB13Q92826 284 aaPredicted RBP16.06■□□□□ 0.16
TPM1-203ENST00000317516 NINJ1Q92982 152 aa16.06■□□□□ 0.16
TPM1-203ENST00000317516 CAVIN3Q969G5 261 aa16.06■□□□□ 0.16
TPM1-203ENST00000317516 C1GALT1C1Q96EU7 318 aa16.06■□□□□ 0.16
TPM1-203ENST00000317516 MS4A4EQ96PG1 132 aa16.06■□□□□ 0.16
TPM1-203ENST00000317516 PRPF18Q99633 342 aaKnown RBP16.06■□□□□ 0.16
TPM1-203ENST00000317516 G6PC3Q9BUM1 346 aa16.06■□□□□ 0.16
TPM1-203ENST00000317516 ATAD3AQ9NVI7 634 aa16.06■□□□□ 0.16
TPM1-203ENST00000317516 FLRT3Q9NZU0 649 aa16.06■□□□□ 0.16
TPM1-203ENST00000317516 ATP6V1HQ9UI12 483 aa16.06■□□□□ 0.16
TPM1-203ENST00000317516 ANKHD1Q8IWZ3 2542 aaKnown RBP16.05■□□□□ 0.16
TPM1-203ENST00000317516 IGLV3-32A0A0A0MS00 114 aa16.05■□□□□ 0.16
TPM1-203ENST00000317516 SLC22A20A6NK97 555 aa16.05■□□□□ 0.16
TPM1-203ENST00000317516 TMEM233B4DJY2 109 aa16.05■□□□□ 0.16
TPM1-203ENST00000317516 HCRTR2O43614 444 aa16.05■□□□□ 0.16
TPM1-203ENST00000317516 PEX11AO75192 247 aa16.05■□□□□ 0.16
TPM1-203ENST00000317516 TNFRSF21O75509 655 aa16.05■□□□□ 0.16
TPM1-203ENST00000317516 LYPLA1O75608 230 aaPredicted RBP16.05■□□□□ 0.16
TPM1-203ENST00000317516 SOX30O94993 753 aa16.05■□□□□ 0.16
TPM1-203ENST00000317516 GOSR1O95249 250 aa16.05■□□□□ 0.16
TPM1-203ENST00000317516 SLU7O95391 586 aaKnown RBP16.05■□□□□ 0.16
TPM1-203ENST00000317516 HSPA4LO95757 839 aa16.05■□□□□ 0.16
TPM1-203ENST00000317516 ALOX5P09917 674 aa16.05■□□□□ 0.16
TPM1-203ENST00000317516 HPGDP15428 266 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms