RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 SLC35C2Q9NQQ7 365 aa12.59□□□□□ -0.39
SKA3-202ENST00000314759 SRRDQ9UH36 339 aa12.59□□□□□ -0.39
SKA3-202ENST00000314759 IL20RAQ9UHF4 553 aa12.59□□□□□ -0.39
SKA3-202ENST00000314759 KIAA0355O15063 1070 aa12.58□□□□□ -0.39
SKA3-202ENST00000314759 CASC3O15234 703 aaKnown RBP12.58□□□□□ -0.39
SKA3-202ENST00000314759 EFCAB14O75071 495 aa12.58□□□□□ -0.39
SKA3-202ENST00000314759 MPC2O95563 127 aa12.58□□□□□ -0.39
SKA3-202ENST00000314759 TPOP07202 933 aa12.58□□□□□ -0.39
SKA3-202ENST00000314759 TRHRP34981 398 aaPredicted RBP12.58□□□□□ -0.39
SKA3-202ENST00000314759 IFNGR2P38484 337 aa12.58□□□□□ -0.39
SKA3-202ENST00000314759 ATP12AP54707 1039 aa12.58□□□□□ -0.39
SKA3-202ENST00000314759 BTG1P62324 171 aa12.58□□□□□ -0.39
SKA3-202ENST00000314759 RPA4Q13156 261 aa12.58□□□□□ -0.39
SKA3-202ENST00000314759 ANGPT1Q15389 498 aa12.58□□□□□ -0.39
SKA3-202ENST00000314759 AANATQ16613 207 aa12.58□□□□□ -0.39
SKA3-202ENST00000314759 IL20RBQ6UXL0 311 aa12.58□□□□□ -0.39
SKA3-202ENST00000314759 KIAA0907Q7Z7F0 614 aaPredicted RBP12.58□□□□□ -0.39
SKA3-202ENST00000314759 CDH24Q86UP0 819 aa12.58□□□□□ -0.39
SKA3-202ENST00000314759 OR52N1Q8NH53 320 aa12.58□□□□□ -0.39
SKA3-202ENST00000314759 TFGQ92734 400 aaPredicted RBP12.58□□□□□ -0.39
SKA3-202ENST00000314759 TCEAL4Q96EI5 215 aa12.58□□□□□ -0.39
SKA3-202ENST00000314759 C16orf58Q96GQ5 468 aa12.58□□□□□ -0.39
SKA3-202ENST00000314759 THAP7Q9BT49 309 aaPredicted RBP12.58□□□□□ -0.39
SKA3-202ENST00000314759 PINK1Q9BXM7 581 aa12.58□□□□□ -0.39
SKA3-202ENST00000314759 PELI2Q9HAT8 420 aa12.58□□□□□ -0.39
SKA3-202ENST00000314759 WASH6PQ9NQA3 447 aa12.58□□□□□ -0.39
SKA3-202ENST00000314759 CYSLTR2Q9NS75 346 aa12.58□□□□□ -0.39
SKA3-202ENST00000314759 PHF11Q9UIL8 331 aa12.58□□□□□ -0.39
SKA3-202ENST00000314759 SIRT4Q9Y6E7 314 aaPredicted RBP12.58□□□□□ -0.39
SKA3-202ENST00000314759 CSNK1G3Q9Y6M4 447 aa12.58□□□□□ -0.39
SKA3-202ENST00000314759 TSPAN4O14817 238 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 OR1F1O43749 312 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 LCMT2O60294 686 aaKnown RBP12.58□□□□□ -0.4
SKA3-202ENST00000314759 LZTS3O60299 673 aaPredicted RBP12.58□□□□□ -0.4
SKA3-202ENST00000314759 LILRB3O75022 631 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 C8AP07357 584 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 ATP6V1E1P36543 226 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 CCR8P51685 355 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 TRAM2Q15035 370 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 ZNF750Q32MQ0 723 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 BICRALQ6AI39 1079 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 DCUN1D3Q8IWE4 304 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 LRRC17Q8N6Y2 441 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 OR5M3Q8NGP4 307 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 DIO2Q92813 273 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 NUS1Q96E22 293 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 LRIG1Q96JA1 1093 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 SORCS2Q96PQ0 1159 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 NT5DC2Q9H857 520 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 FOLH1BQ9HBA9 442 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 IMP3Q9NV31 184 aaKnown RBP12.58□□□□□ -0.4
SKA3-202ENST00000314759 CBLCQ9ULV8 474 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 MAFFQ9ULX9 164 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 ZFR2Q9UPR6 939 aaKnown RBP12.58□□□□□ -0.4
SKA3-202ENST00000314759 MKI67P46013 3256 aaKnown RBP12.58□□□□□ -0.4
SKA3-202ENST00000314759 A0A0G2JPF8 293 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 HNRNPCL2B2RXH8 293 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 HNRNPCL3B7ZW38 293 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 CFDP00746 253 aaPredicted RBP12.58□□□□□ -0.4
SKA3-202ENST00000314759 HNRNPCL4P0DMR1 293 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 GPR4P46093 362 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 SRP9P49458 86 aaKnown RBP12.58□□□□□ -0.4
SKA3-202ENST00000314759 REEP5Q00765 189 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 SP3Q02447 781 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 EXOSC2Q13868 293 aaKnown RBP12.58□□□□□ -0.4
SKA3-202ENST00000314759 ZNF311Q5JNZ3 666 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 OR4C11Q6IEV9 310 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 PLEKHM3Q6ZWE6 761 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 RRM2BQ7LG56 351 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 C16orf62Q7Z3J2 963 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 VRK2Q86Y07 508 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 NKAIN4Q8IVV8 208 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 SIRT6Q8N6T7 355 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 C7orf57Q8NEG2 295 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 ACOT12Q8WYK0 555 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 ZNF514Q96K75 400 aaPredicted RBP12.58□□□□□ -0.4
SKA3-202ENST00000314759 CAMK1GQ96NX5 476 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 C1QTNF6Q9BXI9 259 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 AICDAQ9GZX7 198 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 ABCG5Q9H222 651 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 IL20Q9NYY1 176 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 PTGFRNQ9P2B2 879 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 NTNG1Q9Y2I2 539 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 CHST2Q9Y4C5 530 aa12.58□□□□□ -0.4
SKA3-202ENST00000314759 LRRK1Q38SD2 2015 aa12.57□□□□□ -0.4
SKA3-202ENST00000314759 A0A0A6YYD5 115 aa12.57□□□□□ -0.4
SKA3-202ENST00000314759 SOCS6O14544 535 aa12.57□□□□□ -0.4
SKA3-202ENST00000314759 CCL16O15467 120 aa12.57□□□□□ -0.4
SKA3-202ENST00000314759 SERPIND1P05546 499 aa12.57□□□□□ -0.4
SKA3-202ENST00000314759 EIF4EP06730 217 aaKnown RBP12.57□□□□□ -0.4
SKA3-202ENST00000314759 ERGP11308 486 aa12.57□□□□□ -0.4
SKA3-202ENST00000314759 HTR1FP30939 366 aa12.57□□□□□ -0.4
SKA3-202ENST00000314759 BTCP35070 178 aa12.57□□□□□ -0.4
SKA3-202ENST00000314759 CLCNKAP51800 687 aa12.57□□□□□ -0.4
SKA3-202ENST00000314759 TAS2R38P59533 333 aa12.57□□□□□ -0.4
SKA3-202ENST00000314759 COL9A2Q14055 689 aaPredicted RBP12.57□□□□□ -0.4
SKA3-202ENST00000314759 LGALSLQ3ZCW2 172 aaPredicted RBP12.57□□□□□ -0.4
SKA3-202ENST00000314759 GPR139Q6DWJ6 353 aa12.57□□□□□ -0.4
SKA3-202ENST00000314759 ZNF793Q6ZN11 406 aa12.57□□□□□ -0.4
SKA3-202ENST00000314759 HSD17B8Q92506 261 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms