RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 C11orf49Q9H6J7 331 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 POLMQ9NP87 494 aaPredicted RBP16.93■□□□□ 0.3
SPSB4-201ENST00000310546 ACTR10Q9NZ32 417 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 FCF1Q9Y324 198 aaKnown RBP16.93■□□□□ 0.3
SPSB4-201ENST00000310546 NPTNQ9Y639 398 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 CKAP5Q14008 2032 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 DOCK6Q96HP0 2047 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 ZNF8P17098 575 aaPredicted RBP16.93■□□□□ 0.3
SPSB4-201ENST00000310546 VEGFCP49767 419 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 CDH11P55287 796 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 MAP4K2Q12851 820 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 ZNF155Q12901 538 aaPredicted RBP16.93■□□□□ 0.3
SPSB4-201ENST00000310546 CAMK1Q14012 370 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 FGL2Q14314 439 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 HIST2H2AA3Q6FI13 130 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 SPRED2Q7Z698 418 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 OR4K5Q8NGD3 323 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 SLC38A5Q8WUX1 472 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 ARMC5Q96C12 935 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 WDR89Q96FK6 387 aaPredicted RBP16.93■□□□□ 0.3
SPSB4-201ENST00000310546 BHLHE41Q9C0J9 482 aaPredicted RBP16.93■□□□□ 0.3
SPSB4-201ENST00000310546 EVA1AQ9H8M9 152 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 ING1Q9UK53 422 aaPredicted RBP16.93■□□□□ 0.3
SPSB4-201ENST00000310546 PLSCR5A0PG75 271 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 FAM170BA6NMN3 283 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 ARHGEF33A8MVX0 844 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 ARPC5O15511 151 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 SLC28A2O43868 658 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 PEX14O75381 377 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 SIM1P81133 766 aaPredicted RBP16.93■□□□□ 0.3
SPSB4-201ENST00000310546 MRPL58Q14197 206 aaKnown RBP16.93■□□□□ 0.3
SPSB4-201ENST00000310546 PDSS1Q5T2R2 415 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 LIPJQ5W064 366 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 PRSS45Q7RTY3 260 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 HMGN2P46Q86SG4 172 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 PM20D2Q8IYS1 436 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 NXPE1Q8N323 547 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 APOBEC4Q8WW27 367 aaKnown RBP16.93■□□□□ 0.3
SPSB4-201ENST00000310546 ASB11Q8WXH4 323 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 OR10A4Q9H209 315 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 MED9Q9NWA0 146 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 MBD1Q9UIS9 605 aaPredicted RBP16.93■□□□□ 0.3
SPSB4-201ENST00000310546 CBLCQ9ULV8 474 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 ADRB1P08588 477 aa16.92■□□□□ 0.3
SPSB4-201ENST00000310546 TIA1P31483 386 aaKnown RBP eCLIP16.92■□□□□ 0.3
SPSB4-201ENST00000310546 SGSHP51688 502 aa16.92■□□□□ 0.3
SPSB4-201ENST00000310546 RHOAP61586 193 aa16.92■□□□□ 0.3
SPSB4-201ENST00000310546 RPS13P62277 151 aaKnown RBP16.92■□□□□ 0.3
SPSB4-201ENST00000310546 MINDY4Q4G0A6 757 aa16.92■□□□□ 0.3
SPSB4-201ENST00000310546 RNF219Q5W0B1 726 aaPredicted RBP16.92■□□□□ 0.3
SPSB4-201ENST00000310546 KLHL36Q8N4N3 616 aa16.92■□□□□ 0.3
SPSB4-201ENST00000310546 HMGB4Q8WW32 186 aa16.92■□□□□ 0.3
SPSB4-201ENST00000310546 ELAC1Q9H777 363 aaKnown RBP16.92■□□□□ 0.3
SPSB4-201ENST00000310546 CA10Q9NS85 328 aa16.92■□□□□ 0.3
SPSB4-201ENST00000310546 IRGMA1A4Y4 181 aa16.92■□□□□ 0.3
SPSB4-201ENST00000310546 CHST10O43529 356 aa16.92■□□□□ 0.3
SPSB4-201ENST00000310546 SMAD6O43541 496 aaKnown RBP16.92■□□□□ 0.3
SPSB4-201ENST00000310546 SELENOFO60613 162 aa16.92■□□□□ 0.3
SPSB4-201ENST00000310546 SDC3O75056 442 aa16.92■□□□□ 0.3
SPSB4-201ENST00000310546 GJB5O95377 273 aa16.92■□□□□ 0.3
SPSB4-201ENST00000310546 UGT2B7P16662 529 aa16.92■□□□□ 0.3
SPSB4-201ENST00000310546 SYN1P17600 705 aa16.92■□□□□ 0.3
SPSB4-201ENST00000310546 CSNK1DP48730 415 aa16.92■□□□□ 0.3
SPSB4-201ENST00000310546 ARF5P84085 180 aa16.92■□□□□ 0.3
SPSB4-201ENST00000310546 HTR4Q13639 388 aa16.92■□□□□ 0.3
SPSB4-201ENST00000310546 SLC25A30Q5SVS4 291 aa16.92■□□□□ 0.3
SPSB4-201ENST00000310546 SFXN4Q6P4A7 337 aa16.92■□□□□ 0.3
SPSB4-201ENST00000310546 SCARB1Q8WTV0 552 aa16.92■□□□□ 0.3
SPSB4-201ENST00000310546 ISG20L2Q9H9L3 353 aaKnown RBP16.92■□□□□ 0.3
SPSB4-201ENST00000310546 CHST2Q9Y4C5 530 aa16.92■□□□□ 0.3
SPSB4-201ENST00000310546 PLXNA3P51805 1871 aa16.91■□□□□ 0.3
SPSB4-201ENST00000310546 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.91■□□□□ 0.3
SPSB4-201ENST00000310546 ANKDD1BA6NHY2 528 aa16.91■□□□□ 0.3
SPSB4-201ENST00000310546 SLC9B1P1A6NJY1 282 aa16.91■□□□□ 0.3
SPSB4-201ENST00000310546 M0R3H8 397 aa16.91■□□□□ 0.3
SPSB4-201ENST00000310546 RP2O75695 350 aa16.91■□□□□ 0.3
SPSB4-201ENST00000310546 GLAP06280 429 aa16.91■□□□□ 0.3
SPSB4-201ENST00000310546 ERVK-25P63136 954 aa16.91■□□□□ 0.3
SPSB4-201ENST00000310546 ZNF177Q13360 481 aaPredicted RBP16.91■□□□□ 0.3
SPSB4-201ENST00000310546 HLXQ14774 488 aaPredicted RBP16.91■□□□□ 0.3
SPSB4-201ENST00000310546 GPR33Q49SQ1 333 aa16.91■□□□□ 0.3
SPSB4-201ENST00000310546 MPP7Q5T2T1 576 aa16.91■□□□□ 0.3
SPSB4-201ENST00000310546 PDZD9Q8IXQ8 264 aa16.91■□□□□ 0.3
SPSB4-201ENST00000310546 CRIPAKQ8N1N5 446 aa16.91■□□□□ 0.3
SPSB4-201ENST00000310546 GOT1L1Q8NHS2 421 aaPredicted RBP16.91■□□□□ 0.3
SPSB4-201ENST00000310546 TMEM19Q96HH6 336 aa16.91■□□□□ 0.3
SPSB4-201ENST00000310546 AHCYL2Q96HN2 611 aaKnown RBP16.91■□□□□ 0.3
SPSB4-201ENST00000310546 NARS2Q96I59 477 aaKnown RBP16.91■□□□□ 0.3
SPSB4-201ENST00000310546 SPATA5L1Q9BVQ7 753 aa16.91■□□□□ 0.3
SPSB4-201ENST00000310546 ARL6Q9H0F7 186 aa16.91■□□□□ 0.3
SPSB4-201ENST00000310546 WDR26Q9H7D7 661 aa16.91■□□□□ 0.3
SPSB4-201ENST00000310546 TEX10Q9NXF1 929 aaPredicted RBP16.91■□□□□ 0.3
SPSB4-201ENST00000310546 A0A1W2PRB8 838 aa16.91■□□□□ 0.3
SPSB4-201ENST00000310546 TRABD2BA6NFA1 517 aa16.91■□□□□ 0.3
SPSB4-201ENST00000310546 ABCD4O14678 606 aa16.91■□□□□ 0.3
SPSB4-201ENST00000310546 SIGLEC6O43699 453 aa16.91■□□□□ 0.3
SPSB4-201ENST00000310546 THBS2P35442 1172 aa16.91■□□□□ 0.3
SPSB4-201ENST00000310546 NSG1P42857 185 aa16.91■□□□□ 0.3
SPSB4-201ENST00000310546 AP1S2P56377 157 aa16.91■□□□□ 0.3
SPSB4-201ENST00000310546 CDK5Q00535 292 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms