RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 TRILQ7L0X0 811 aa18.12■□□□□ 0.49
VEGFB-201ENST00000309422 CD163Q86VB7 1156 aa18.12■□□□□ 0.49
VEGFB-201ENST00000309422 MISPQ8IVT2 679 aa18.12■□□□□ 0.49
VEGFB-201ENST00000309422 OR14L1PQ8NHC6 308 aa18.12■□□□□ 0.49
VEGFB-201ENST00000309422 FAM57AQ8TBR7 257 aa18.12■□□□□ 0.49
VEGFB-201ENST00000309422 NUDT8Q8WV74 236 aa18.12■□□□□ 0.49
VEGFB-201ENST00000309422 HOXB13Q92826 284 aaPredicted RBP18.12■□□□□ 0.49
VEGFB-201ENST00000309422 THOC1Q96FV9 657 aaKnown RBP18.12■□□□□ 0.49
VEGFB-201ENST00000309422 OTUB1Q96FW1 271 aaPredicted RBP18.12■□□□□ 0.49
VEGFB-201ENST00000309422 GNRHR2Q96P88 292 aa18.12■□□□□ 0.49
VEGFB-201ENST00000309422 EBF4Q9BQW3 602 aa18.12■□□□□ 0.49
VEGFB-201ENST00000309422 TP63Q9H3D4 680 aaPredicted RBP18.12■□□□□ 0.49
VEGFB-201ENST00000309422 PROK2Q9HC23 129 aa18.12■□□□□ 0.49
VEGFB-201ENST00000309422 ACKR4Q9NPB9 350 aa18.12■□□□□ 0.49
VEGFB-201ENST00000309422 UBQLN4Q9NRR5 601 aa18.12■□□□□ 0.49
VEGFB-201ENST00000309422 CROCCQ5TZA2 2017 aa18.11■□□□□ 0.49
VEGFB-201ENST00000309422 CCDC154A6NI56 674 aa18.11■□□□□ 0.49
VEGFB-201ENST00000309422 NPIPA2E9PIF3 369 aa18.11■□□□□ 0.49
VEGFB-201ENST00000309422 NPIPA3F8WFD2 350 aa18.11■□□□□ 0.49
VEGFB-201ENST00000309422 NCF2P19878 526 aaPredicted RBP18.11■□□□□ 0.49
VEGFB-201ENST00000309422 ATP4BP51164 291 aa18.11■□□□□ 0.49
VEGFB-201ENST00000309422 GANABQ14697 944 aaKnown RBP18.11■□□□□ 0.49
VEGFB-201ENST00000309422 SF3B4Q15427 424 aaKnown RBP eCLIP18.11■□□□□ 0.494e-7■■■■■ 29.5
VEGFB-201ENST00000309422 DNAJC14Q6Y2X3 702 aaPredicted RBP18.11■□□□□ 0.49
VEGFB-201ENST00000309422 TEX37Q96LM6 180 aa18.11■□□□□ 0.49
VEGFB-201ENST00000309422 OR7D2Q96RA2 312 aa18.11■□□□□ 0.49
VEGFB-201ENST00000309422 SERHLQ9NQF3 203 aa18.11■□□□□ 0.49
VEGFB-201ENST00000309422 PLSCR2Q9NRY7 297 aa18.11■□□□□ 0.49
VEGFB-201ENST00000309422 GPATCH2Q9NW75 528 aa18.11■□□□□ 0.49
VEGFB-201ENST00000309422 TMEM45AQ9NWC5 275 aa18.11■□□□□ 0.49
VEGFB-201ENST00000309422 TINAGQ9UJW2 476 aa18.11■□□□□ 0.49
VEGFB-201ENST00000309422 SHANK1Q9Y566 2161 aa18.11■□□□□ 0.49
VEGFB-201ENST00000309422 TMEM247A6NEH6 219 aa18.1■□□□□ 0.49
VEGFB-201ENST00000309422 NDUFB5O43674 189 aa18.1■□□□□ 0.49
VEGFB-201ENST00000309422 HPNP05981 417 aa18.1■□□□□ 0.49
VEGFB-201ENST00000309422 PTPN6P29350 595 aa18.1■□□□□ 0.49
VEGFB-201ENST00000309422 TRPC1P48995 793 aa18.1■□□□□ 0.49
VEGFB-201ENST00000309422 SMSP52788 366 aa18.1■□□□□ 0.49
VEGFB-201ENST00000309422 GUCY1A3Q02108 690 aa18.1■□□□□ 0.49
VEGFB-201ENST00000309422 C17orf67Q0P5P2 114 aa18.1■□□□□ 0.49
VEGFB-201ENST00000309422 C3AR1Q16581 482 aa18.1■□□□□ 0.49
VEGFB-201ENST00000309422 FLYWCH1Q4VC44 716 aa18.1■□□□□ 0.49
VEGFB-201ENST00000309422 DESI1Q6ICB0 168 aa18.1■□□□□ 0.49
VEGFB-201ENST00000309422 AAGABQ6PD74 315 aa18.1■□□□□ 0.49
VEGFB-201ENST00000309422 RPTNQ6XPR3 784 aa18.1■□□□□ 0.49
VEGFB-201ENST00000309422 Q6ZPB1 254 aaPredicted RBP18.1■□□□□ 0.49
VEGFB-201ENST00000309422 IFNEQ86WN2 208 aa18.1■□□□□ 0.49
VEGFB-201ENST00000309422 NEIL3Q8TAT5 605 aa18.1■□□□□ 0.49
VEGFB-201ENST00000309422 CACYBPQ9HB71 228 aaKnown RBP18.1■□□□□ 0.49
VEGFB-201ENST00000309422 ERRFI1Q9UJM3 462 aaPredicted RBP18.1■□□□□ 0.49
VEGFB-201ENST00000309422 C2orf72A6NCS6 295 aa18.09■□□□□ 0.49
VEGFB-201ENST00000309422 NR5A2O00482 541 aa18.09■□□□□ 0.49
VEGFB-201ENST00000309422 SEMA7AO75326 666 aa18.09■□□□□ 0.49
VEGFB-201ENST00000309422 NGFRP08138 427 aa18.09■□□□□ 0.49
VEGFB-201ENST00000309422 RFPL3SP0C7P2 107 aa18.09■□□□□ 0.49
VEGFB-201ENST00000309422 ENDOUP21128 410 aaKnown RBP18.09■□□□□ 0.49
VEGFB-201ENST00000309422 MAP3K8P41279 467 aa18.09■□□□□ 0.49
VEGFB-201ENST00000309422 MRPL19P49406 292 aaKnown RBP18.09■□□□□ 0.49
VEGFB-201ENST00000309422 RPS26P62854 115 aaKnown RBP18.09■□□□□ 0.49
VEGFB-201ENST00000309422 GRAMD1BQ3KR37 738 aa18.09■□□□□ 0.49
VEGFB-201ENST00000309422 GALNT10Q86SR1 603 aa18.09■□□□□ 0.49
VEGFB-201ENST00000309422 PM20D2Q8IYS1 436 aa18.09■□□□□ 0.49
VEGFB-201ENST00000309422 ZNF614Q8N883 585 aa18.09■□□□□ 0.49
VEGFB-201ENST00000309422 OR5D16Q8NGK9 328 aa18.09■□□□□ 0.49
VEGFB-201ENST00000309422 GOT1L1Q8NHS2 421 aaPredicted RBP18.09■□□□□ 0.49
VEGFB-201ENST00000309422 RELTQ969Z4 430 aa18.09■□□□□ 0.49
VEGFB-201ENST00000309422 NEURL3Q96EH8 262 aa18.09■□□□□ 0.49
VEGFB-201ENST00000309422 SLC6A15Q9H2J7 730 aa18.09■□□□□ 0.49
VEGFB-201ENST00000309422 OR51I1Q9H343 314 aa18.09■□□□□ 0.49
VEGFB-201ENST00000309422 RAD21L1Q9H4I0 556 aa18.09■□□□□ 0.49
VEGFB-201ENST00000309422 CCDC167Q9P0B6 97 aa18.09■□□□□ 0.49
VEGFB-201ENST00000309422 ZNF835Q9Y2P0 537 aa18.09■□□□□ 0.49
VEGFB-201ENST00000309422 LIPGQ9Y5X9 500 aa18.09■□□□□ 0.49
VEGFB-201ENST00000309422 MYO18BQ8IUG5 2567 aa18.09■□□□□ 0.49
VEGFB-201ENST00000309422 A0A1B0GVC2 190 aa18.08■□□□□ 0.49
VEGFB-201ENST00000309422 DYNC1I1O14576 645 aa18.08■□□□□ 0.49
VEGFB-201ENST00000309422 ANGPTL1O95841 491 aa18.08■□□□□ 0.49
VEGFB-201ENST00000309422 CELA3AP09093 270 aa18.08■□□□□ 0.49
VEGFB-201ENST00000309422 GABRA1P14867 456 aa18.08■□□□□ 0.49
VEGFB-201ENST00000309422 TBXA2RP21731 343 aa18.08■□□□□ 0.49
VEGFB-201ENST00000309422 IL12AP29459 219 aa18.08■□□□□ 0.49
VEGFB-201ENST00000309422 SRD5A2P31213 254 aa18.08■□□□□ 0.49
VEGFB-201ENST00000309422 MDH1P40925 334 aaKnown RBP18.08■□□□□ 0.49
VEGFB-201ENST00000309422 PTGDSP41222 190 aa18.08■□□□□ 0.49
VEGFB-201ENST00000309422 CCNJQ5T5M9 372 aa18.08■□□□□ 0.49
VEGFB-201ENST00000309422 SAXO2Q658L1 398 aa18.08■□□□□ 0.49
VEGFB-201ENST00000309422 TMEM211Q6ICI0 200 aa18.08■□□□□ 0.49
VEGFB-201ENST00000309422 TNFAIP8L2Q6P589 184 aaPredicted RBP18.08■□□□□ 0.49
VEGFB-201ENST00000309422 ENPP6Q6UWR7 440 aa18.08■□□□□ 0.49
VEGFB-201ENST00000309422 OR9I1Q8NGQ6 314 aa18.08■□□□□ 0.49
VEGFB-201ENST00000309422 FGFR1OP2Q9NVK5 253 aa18.08■□□□□ 0.49
VEGFB-201ENST00000309422 TAS2R10Q9NYW0 307 aa18.08■□□□□ 0.49
VEGFB-201ENST00000309422 GCN1Q92616 2671 aaKnown RBP18.08■□□□□ 0.49
VEGFB-201ENST00000309422 HELZ2Q9BYK8 2649 aaKnown RBP18.08■□□□□ 0.48
VEGFB-201ENST00000309422 UBR5O95071 2799 aaPredicted RBP18.08■□□□□ 0.48
VEGFB-201ENST00000309422 RP1L1Q8IWN7 2480 aaPredicted RBP18.08■□□□□ 0.48
VEGFB-201ENST00000309422 SCN2BO60939 215 aa18.07■□□□□ 0.48
VEGFB-201ENST00000309422 WDR1O75083 606 aa18.07■□□□□ 0.48
VEGFB-201ENST00000309422 STX11O75558 287 aa18.07■□□□□ 0.48
VEGFB-201ENST00000309422 OXSR1O95747 527 aaPredicted RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms