RNA–Protein interactions for RNA: ENST00000307216.10

TMEM87A-201, Transcript of transmembrane protein 87A, humanhuman

TSL 1 (best) BASIC

Gene TMEM87A, Length 1,598 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87A-201ENST00000307216 UCK1Q9HA47 277 aa13.28□□□□□ -0.28
TMEM87A-201ENST00000307216 HHATLQ9HCP6 504 aa13.28□□□□□ -0.28
TMEM87A-201ENST00000307216 POMT2Q9UKY4 750 aa13.28□□□□□ -0.28
TMEM87A-201ENST00000307216 CDH10Q9Y6N8 788 aa13.28□□□□□ -0.28
TMEM87A-201ENST00000307216 LOC105369274A0A096LPK9 316 aa13.27□□□□□ -0.29
TMEM87A-201ENST00000307216 LOC102723532A0A0G2JNH3 316 aa13.27□□□□□ -0.29
TMEM87A-201ENST00000307216 DSCR3O14972 297 aa13.27□□□□□ -0.29
TMEM87A-201ENST00000307216 KLF4O43474 513 aa13.27□□□□□ -0.29
TMEM87A-201ENST00000307216 CHST10O43529 356 aa13.27□□□□□ -0.29
TMEM87A-201ENST00000307216 SRPX2O60687 465 aaPredicted RBP13.27□□□□□ -0.29
TMEM87A-201ENST00000307216 ZNF217O75362 1048 aa13.27□□□□□ -0.29
TMEM87A-201ENST00000307216 IGFBP1P08833 259 aaPredicted RBP13.27□□□□□ -0.29
TMEM87A-201ENST00000307216 SLC35E2P0CK97 266 aa13.27□□□□□ -0.29
TMEM87A-201ENST00000307216 THEGLP0DJG4 465 aa13.27□□□□□ -0.29
TMEM87A-201ENST00000307216 CPEP16870 476 aa13.27□□□□□ -0.29
TMEM87A-201ENST00000307216 NT5EP21589 574 aa13.27□□□□□ -0.29
TMEM87A-201ENST00000307216 GRK5P34947 590 aa13.27□□□□□ -0.29
TMEM87A-201ENST00000307216 MTNR1AP48039 350 aa13.27□□□□□ -0.29
TMEM87A-201ENST00000307216 POU6F2P78424 691 aaPredicted RBP13.27□□□□□ -0.29
TMEM87A-201ENST00000307216 BNC1Q01954 994 aa13.27□□□□□ -0.29
TMEM87A-201ENST00000307216 HHEXQ03014 270 aa13.27□□□□□ -0.29
TMEM87A-201ENST00000307216 EIF2B5Q13144 721 aaKnown RBP13.27□□□□□ -0.29
TMEM87A-201ENST00000307216 SSX1Q16384 188 aa13.27□□□□□ -0.29
TMEM87A-201ENST00000307216 SPANXN2Q5MJ10 180 aa13.27□□□□□ -0.29
TMEM87A-201ENST00000307216 PRICKLE2Q7Z3G6 844 aa13.27□□□□□ -0.29
TMEM87A-201ENST00000307216 PARGQ86W56 976 aa13.27□□□□□ -0.29
TMEM87A-201ENST00000307216 KIF18BQ86Y91 864 aa13.27□□□□□ -0.29
TMEM87A-201ENST00000307216 GID4Q8IVV7 300 aa13.27□□□□□ -0.29
TMEM87A-201ENST00000307216 OR4N4Q8N0Y3 316 aa13.27□□□□□ -0.29
TMEM87A-201ENST00000307216 SLC22A18ASQ8N1D0 253 aa13.27□□□□□ -0.29
TMEM87A-201ENST00000307216 CA13Q8N1Q1 262 aa13.27□□□□□ -0.29
TMEM87A-201ENST00000307216 IQCF1Q8N6M8 205 aa13.27□□□□□ -0.29
TMEM87A-201ENST00000307216 ANKK1Q8NFD2 765 aa13.27□□□□□ -0.29
TMEM87A-201ENST00000307216 HOXB13Q92826 284 aaPredicted RBP13.27□□□□□ -0.29
TMEM87A-201ENST00000307216 ITPKCQ96DU7 683 aa13.27□□□□□ -0.29
TMEM87A-201ENST00000307216 HS6ST2Q96MM7 605 aa13.27□□□□□ -0.29
TMEM87A-201ENST00000307216 COQ7Q99807 217 aa13.27□□□□□ -0.29
TMEM87A-201ENST00000307216 JAM3Q9BX67 310 aa13.27□□□□□ -0.29
TMEM87A-201ENST00000307216 ALOXE3Q9BYJ1 711 aa13.27□□□□□ -0.29
TMEM87A-201ENST00000307216 CPNE5Q9HCH3 593 aa13.27□□□□□ -0.29
TMEM87A-201ENST00000307216 MRPS33Q9Y291 106 aaKnown RBP13.27□□□□□ -0.29
TMEM87A-201ENST00000307216 CHST2Q9Y4C5 530 aa13.27□□□□□ -0.29
TMEM87A-201ENST00000307216 MN1Q10571 1320 aaPredicted RBP13.27□□□□□ -0.29
TMEM87A-201ENST00000307216 ZNF670-ZNF695F2Z2N8 137 aa13.26□□□□□ -0.29
TMEM87A-201ENST00000307216 FCMRO60667 390 aa13.26□□□□□ -0.29
TMEM87A-201ENST00000307216 EIF2S1P05198 315 aaKnown RBP13.26□□□□□ -0.29
TMEM87A-201ENST00000307216 PTGER1P34995 402 aa13.26□□□□□ -0.29
TMEM87A-201ENST00000307216 MAP3K8P41279 467 aa13.26□□□□□ -0.29
TMEM87A-201ENST00000307216 RORCP51449 518 aa13.26□□□□□ -0.29
TMEM87A-201ENST00000307216 RUNX1T1Q06455 604 aa13.26□□□□□ -0.29
TMEM87A-201ENST00000307216 CDC20Q12834 499 aa13.26□□□□□ -0.29
TMEM87A-201ENST00000307216 BIKQ13323 160 aa13.26□□□□□ -0.29
TMEM87A-201ENST00000307216 ZNHIT3Q15649 155 aaPredicted RBP13.26□□□□□ -0.29
TMEM87A-201ENST00000307216 PRICKLE4Q2TBC4 344 aa13.26□□□□□ -0.29
TMEM87A-201ENST00000307216 ZNF620Q6ZNG0 422 aa13.26□□□□□ -0.29
TMEM87A-201ENST00000307216 CDK20Q8IZL9 346 aa13.26□□□□□ -0.29
TMEM87A-201ENST00000307216 CLIP4Q8N3C7 705 aa13.26□□□□□ -0.29
TMEM87A-201ENST00000307216 OR2T33Q8NG76 320 aa13.26□□□□□ -0.29
TMEM87A-201ENST00000307216 OR52L1Q8NGH7 329 aa13.26□□□□□ -0.29
TMEM87A-201ENST00000307216 BRIX1Q8TDN6 353 aaKnown RBP13.26□□□□□ -0.29
TMEM87A-201ENST00000307216 CTHRC1Q96CG8 243 aa13.26□□□□□ -0.29
TMEM87A-201ENST00000307216 RNFT2Q96EX2 444 aa13.26□□□□□ -0.29
TMEM87A-201ENST00000307216 KLHDC7BQ96G42 594 aa13.26□□□□□ -0.29
TMEM87A-201ENST00000307216 FAM46AQ96IP4 442 aaKnown RBP13.26□□□□□ -0.29
TMEM87A-201ENST00000307216 ZNF578Q96N58 590 aaPredicted RBP13.26□□□□□ -0.29
TMEM87A-201ENST00000307216 ZNF559Q9BR84 538 aa13.26□□□□□ -0.29
TMEM87A-201ENST00000307216 CCDC32Q9BV29 185 aa13.26□□□□□ -0.29
TMEM87A-201ENST00000307216 FN3KQ9H479 309 aa13.26□□□□□ -0.29
TMEM87A-201ENST00000307216 C6orf106Q9H6K1 298 aaPredicted RBP13.26□□□□□ -0.29
TMEM87A-201ENST00000307216 CD93Q9NPY3 652 aa13.26□□□□□ -0.29
TMEM87A-201ENST00000307216 TAS2R16Q9NYV7 291 aa13.26□□□□□ -0.29
TMEM87A-201ENST00000307216 MAT2BQ9NZL9 334 aa13.26□□□□□ -0.29
TMEM87A-201ENST00000307216 GPR55Q9Y2T6 319 aaPredicted RBP13.26□□□□□ -0.29
TMEM87A-201ENST00000307216 SCN3AQ9NY46 2000 aa13.25□□□□□ -0.29
TMEM87A-201ENST00000307216 A0A1W2PPC4 97 aa13.25□□□□□ -0.29
TMEM87A-201ENST00000307216 CHURC1-FNTBB4DL54 471 aa13.25□□□□□ -0.29
TMEM87A-201ENST00000307216 C2CD4DB7Z1M9 353 aa13.25□□□□□ -0.29
TMEM87A-201ENST00000307216 FGF17O60258 216 aa13.25□□□□□ -0.29
TMEM87A-201ENST00000307216 ZIC2O95409 532 aaPredicted RBP13.25□□□□□ -0.29
TMEM87A-201ENST00000307216 IL1AP01583 271 aa13.25□□□□□ -0.29
TMEM87A-201ENST00000307216 TSPAN19P0C672 248 aa13.25□□□□□ -0.29
TMEM87A-201ENST00000307216 GAAP10253 952 aa13.25□□□□□ -0.29
TMEM87A-201ENST00000307216 TGM1P22735 817 aa13.25□□□□□ -0.29
TMEM87A-201ENST00000307216 TRHRP34981 398 aaPredicted RBP13.25□□□□□ -0.29
TMEM87A-201ENST00000307216 DEFA1P59665 94 aa13.25□□□□□ -0.29
TMEM87A-201ENST00000307216 DEFA3P59666 94 aa13.25□□□□□ -0.29
TMEM87A-201ENST00000307216 SHC2P98077 582 aa13.25□□□□□ -0.29
TMEM87A-201ENST00000307216 MAP4K2Q12851 820 aa13.25□□□□□ -0.29
TMEM87A-201ENST00000307216 DSG2Q14126 1118 aa13.25□□□□□ -0.29
TMEM87A-201ENST00000307216 FZD2Q14332 565 aa13.25□□□□□ -0.29
TMEM87A-201ENST00000307216 PGGHGQ32M88 737 aa13.25□□□□□ -0.29
TMEM87A-201ENST00000307216 COL13A1Q5TAT6 717 aaPredicted RBP13.25□□□□□ -0.29
TMEM87A-201ENST00000307216 NXNL2Q5VZ03 156 aa13.25□□□□□ -0.29
TMEM87A-201ENST00000307216 ZNF613Q6PF04 617 aa13.25□□□□□ -0.29
TMEM87A-201ENST00000307216 SYT13Q7L8C5 426 aa13.25□□□□□ -0.29
TMEM87A-201ENST00000307216 OLIG3Q7RTU3 272 aa13.25□□□□□ -0.29
TMEM87A-201ENST00000307216 LAPTM4BQ86VI4 370 aa13.25□□□□□ -0.29
TMEM87A-201ENST00000307216 POGLUT1Q8NBL1 392 aa13.25□□□□□ -0.29
TMEM87A-201ENST00000307216 PSD4Q8NDX1 1056 aa13.25□□□□□ -0.29
TMEM87A-201ENST00000307216 C7orf57Q8NEG2 295 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms