RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 MED21Q13503 144 aa16.23■□□□□ 0.19
KRT28-201ENST00000306658 TCTN3Q6NUS6 607 aa16.23■□□□□ 0.19
KRT28-201ENST00000306658 TMEM205Q6UW68 189 aa16.23■□□□□ 0.19
KRT28-201ENST00000306658 FAM198BQ6UWH4 519 aa16.23■□□□□ 0.19
KRT28-201ENST00000306658 DEF8Q6ZN54 512 aa16.23■□□□□ 0.19
KRT28-201ENST00000306658 CPEB2Q7Z5Q1 589 aaKnown RBP16.23■□□□□ 0.19
KRT28-201ENST00000306658 SLCO6A1Q86UG4 719 aa16.23■□□□□ 0.19
KRT28-201ENST00000306658 BCORP1Q8N888 145 aa16.23■□□□□ 0.19
KRT28-201ENST00000306658 B3GNT7Q8NFL0 401 aa16.23■□□□□ 0.19
KRT28-201ENST00000306658 WDR36Q8NI36 951 aaKnown RBP16.23■□□□□ 0.19
KRT28-201ENST00000306658 LPAR4Q99677 370 aa16.23■□□□□ 0.19
KRT28-201ENST00000306658 SMPD3Q9NY59 655 aaPredicted RBP16.23■□□□□ 0.19
KRT28-201ENST00000306658 USE1Q9NZ43 259 aa16.23■□□□□ 0.19
KRT28-201ENST00000306658 PADI1Q9ULC6 663 aa16.23■□□□□ 0.19
KRT28-201ENST00000306658 PCDHGA3Q9Y5H0 932 aa16.23■□□□□ 0.19
KRT28-201ENST00000306658 LYVE1Q9Y5Y7 322 aa16.23■□□□□ 0.19
KRT28-201ENST00000306658 AP4B1Q9Y6B7 739 aa16.23■□□□□ 0.19
KRT28-201ENST00000306658 FRG2CA6NGY1 282 aa16.22■□□□□ 0.19
KRT28-201ENST00000306658 J3KTA2 159 aa16.22■□□□□ 0.19
KRT28-201ENST00000306658 M0R3H8 397 aa16.22■□□□□ 0.19
KRT28-201ENST00000306658 UGT2B17O75795 530 aa16.22■□□□□ 0.19
KRT28-201ENST00000306658 GADD45GO95257 159 aa16.22■□□□□ 0.19
KRT28-201ENST00000306658 EPPINO95925 133 aa16.22■□□□□ 0.19
KRT28-201ENST00000306658 NID1P14543 1247 aa16.22■□□□□ 0.19
KRT28-201ENST00000306658 PRKACGP22612 351 aa16.22■□□□□ 0.19
KRT28-201ENST00000306658 HMGA2P52926 109 aa16.22■□□□□ 0.19
KRT28-201ENST00000306658 LIMK1P53667 647 aa16.22■□□□□ 0.19
KRT28-201ENST00000306658 PSMD4P55036 377 aaKnown RBP16.22■□□□□ 0.19
KRT28-201ENST00000306658 SMIM11AP58511 58 aa16.22■□□□□ 0.19
KRT28-201ENST00000306658 NCF4Q15080 339 aa16.22■□□□□ 0.19
KRT28-201ENST00000306658 NNATQ16517 81 aa16.22■□□□□ 0.19
KRT28-201ENST00000306658 C6orf15Q6UXA7 325 aaPredicted RBP16.22■□□□□ 0.19
KRT28-201ENST00000306658 ZNF605Q86T29 641 aa16.22■□□□□ 0.19
KRT28-201ENST00000306658 COMTD1Q86VU5 262 aa16.22■□□□□ 0.19
KRT28-201ENST00000306658 HS3ST5Q8IZT8 346 aa16.22■□□□□ 0.19
KRT28-201ENST00000306658 OR4D11Q8NGI4 311 aa16.22■□□□□ 0.19
KRT28-201ENST00000306658 NR4A3Q92570 626 aa16.22■□□□□ 0.19
KRT28-201ENST00000306658 ADIPOR1Q96A54 375 aa16.22■□□□□ 0.19
KRT28-201ENST00000306658 GAL3ST4Q96RP7 486 aa16.22■□□□□ 0.19
KRT28-201ENST00000306658 ARHGDIGQ99819 225 aa16.22■□□□□ 0.19
KRT28-201ENST00000306658 GABARAPL1Q9H0R8 117 aa16.22■□□□□ 0.19
KRT28-201ENST00000306658 PDP1Q9P0J1 537 aaPredicted RBP16.22■□□□□ 0.19
KRT28-201ENST00000306658 KCND3Q9UK17 655 aa16.22■□□□□ 0.19
KRT28-201ENST00000306658 IGHV3-20A0A0C4DH32 117 aa16.21■□□□□ 0.19
KRT28-201ENST00000306658 TEX51A0A1B0GUA7 166 aa16.21■□□□□ 0.19
KRT28-201ENST00000306658 PEX12O00623 359 aa16.21■□□□□ 0.19
KRT28-201ENST00000306658 PCDH17O14917 1159 aa16.21■□□□□ 0.19
KRT28-201ENST00000306658 DENRO43583 198 aaKnown RBP16.21■□□□□ 0.19
KRT28-201ENST00000306658 IGKV1D-16P01601 117 aa16.21■□□□□ 0.19
KRT28-201ENST00000306658 GPR143P51810 404 aa16.21■□□□□ 0.19
KRT28-201ENST00000306658 EEF1A1P68104 462 aaKnown RBP16.21■□□□□ 0.19
KRT28-201ENST00000306658 PPP2R2BQ00005 443 aa16.21■□□□□ 0.19
KRT28-201ENST00000306658 GANABQ14697 944 aaKnown RBP16.21■□□□□ 0.19
KRT28-201ENST00000306658 EBPQ15125 230 aaKnown RBP16.21■□□□□ 0.19
KRT28-201ENST00000306658 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.21■□□□□ 0.19
KRT28-201ENST00000306658 NHSL2Q5HYW2 709 aa16.21■□□□□ 0.19
KRT28-201ENST00000306658 COLEC12Q5KU26 742 aa16.21■□□□□ 0.19
KRT28-201ENST00000306658 RNF220Q5VTB9 566 aa16.21■□□□□ 0.19
KRT28-201ENST00000306658 PAPD4Q6PIY7 484 aaKnown RBP16.21■□□□□ 0.19
KRT28-201ENST00000306658 ZNF836Q6ZNA1 936 aa16.21■□□□□ 0.19
KRT28-201ENST00000306658 RBM45Q8IUH3 476 aaKnown RBP16.21■□□□□ 0.19
KRT28-201ENST00000306658 LACC1Q8IV20 430 aa16.21■□□□□ 0.19
KRT28-201ENST00000306658 C9orf40Q8IXQ3 194 aa16.21■□□□□ 0.19
KRT28-201ENST00000306658 CLIP4Q8N3C7 705 aa16.21■□□□□ 0.19
KRT28-201ENST00000306658 OR6T1Q8NGN1 323 aa16.21■□□□□ 0.19
KRT28-201ENST00000306658 PHF10Q8WUB8 498 aaKnown RBP16.21■□□□□ 0.19
KRT28-201ENST00000306658 ZNF570Q96NI8 536 aa16.21■□□□□ 0.19
KRT28-201ENST00000306658 RDH12Q96NR8 316 aa16.21■□□□□ 0.19
KRT28-201ENST00000306658 SEMA4CQ9C0C4 833 aa16.21■□□□□ 0.19
KRT28-201ENST00000306658 NXF5Q9H1B4 397 aaKnown RBP16.21■□□□□ 0.19
KRT28-201ENST00000306658 EVA1AQ9H8M9 152 aa16.21■□□□□ 0.19
KRT28-201ENST00000306658 SMURF2Q9HAU4 748 aa16.21■□□□□ 0.19
KRT28-201ENST00000306658 ACER3Q9NUN7 267 aa16.21■□□□□ 0.19
KRT28-201ENST00000306658 KCNE5Q9UJ90 142 aa16.21■□□□□ 0.19
KRT28-201ENST00000306658 PPIEQ9UNP9 301 aaKnown RBP16.21■□□□□ 0.19
KRT28-201ENST00000306658 PTRH2Q9Y3E5 179 aaKnown RBP16.21■□□□□ 0.19
KRT28-201ENST00000306658 CHST2Q9Y4C5 530 aa16.21■□□□□ 0.19
KRT28-201ENST00000306658 PCDHGA10Q9Y5H3 936 aa16.21■□□□□ 0.19
KRT28-201ENST00000306658 ORC6Q9Y5N6 252 aa16.21■□□□□ 0.19
KRT28-201ENST00000306658 IFNA8P32881 189 aa16.21■□□□□ 0.18
KRT28-201ENST00000306658 PSPHP78330 225 aa16.21■□□□□ 0.18
KRT28-201ENST00000306658 MAPK14Q16539 360 aa16.21■□□□□ 0.18
KRT28-201ENST00000306658 ZSWIM7Q19AV6 140 aa16.21■□□□□ 0.18
KRT28-201ENST00000306658 C6orf52Q5T4I8 152 aa16.21■□□□□ 0.18
KRT28-201ENST00000306658 ZAR1Q86SH2 424 aa16.21■□□□□ 0.18
KRT28-201ENST00000306658 TAGAPQ8N103 731 aa16.21■□□□□ 0.18
KRT28-201ENST00000306658 ZSCAN1Q8NBB4 408 aa16.21■□□□□ 0.18
KRT28-201ENST00000306658 C17orf47Q8NEP4 570 aa16.21■□□□□ 0.18
KRT28-201ENST00000306658 NFAM1Q8NET5 270 aaPredicted RBP16.21■□□□□ 0.18
KRT28-201ENST00000306658 OR52J3Q8NH60 311 aa16.21■□□□□ 0.18
KRT28-201ENST00000306658 WFDC6Q9BQY6 131 aa16.21■□□□□ 0.18
KRT28-201ENST00000306658 WWTR1Q9GZV5 400 aa16.21■□□□□ 0.18
KRT28-201ENST00000306658 HOXD1Q9GZZ0 328 aa16.21■□□□□ 0.18
KRT28-201ENST00000306658 NMNAT1Q9HAN9 279 aaPredicted RBP16.21■□□□□ 0.18
KRT28-201ENST00000306658 RLIMQ9NVW2 624 aa16.21■□□□□ 0.18
KRT28-201ENST00000306658 ACAD8Q9UKU7 415 aa16.21■□□□□ 0.18
KRT28-201ENST00000306658 RIF1Q5UIP0 2472 aaKnown RBP16.2■□□□□ 0.18
KRT28-201ENST00000306658 NPIPA5A0A0B4J1W7 369 aa16.2■□□□□ 0.18
KRT28-201ENST00000306658 PROB1E7EW31 1015 aa16.2■□□□□ 0.18
KRT28-201ENST00000306658 NPIPA7E9PJI5 369 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms