RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 CASC3O15234 703 aaKnown RBP12.51□□□□□ -0.41
DDX54-201ENST00000306014 ETHE1O95571 254 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 F11P03951 625 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 GKN3PP0CG01 181 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 XCR1P46094 333 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 SLC7A9P82251 487 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 TIAL1Q01085 375 aaKnown RBP eCLIP12.51□□□□□ -0.41
DDX54-201ENST00000306014 CTBSQ01459 385 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 ZNF385BQ569K4 471 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 FAM26DQ5JW98 314 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 CALHM3Q86XJ0 350 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 OR56A3Q8NH54 315 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 PMEPA1Q969W9 287 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 GON7Q9BXV9 100 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 SPATA6Q9NWH7 488 aaPredicted RBP12.51□□□□□ -0.41
DDX54-201ENST00000306014 CCL26Q9Y258 94 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 CACNG2Q9Y698 323 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 TRAPPC13A5PLN9 417 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 UBXN7O94888 489 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 TGM1P22735 817 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 GDI1P31150 447 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 MBTPS1Q14703 1052 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 FAM205BPQ63HN1 556 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 PLCZ1Q86YW0 608 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 MMP21Q8N119 569 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 ZNF582Q96NG8 517 aaPredicted RBP12.51□□□□□ -0.41
DDX54-201ENST00000306014 ZNF226Q9NYT6 803 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 AK6Q9Y3D8 172 aaKnown RBP12.51□□□□□ -0.41
DDX54-201ENST00000306014 TNS1Q9HBL0 1735 aaKnown RBP12.51□□□□□ -0.41
DDX54-201ENST00000306014 QSER1Q2KHR3 1735 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 GFYI3L273 518 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 GYPBP06028 91 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 FNTBP49356 437 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 IHHQ14623 411 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 ATXN7L3Q14CW9 347 aaPredicted RBP12.51□□□□□ -0.41
DDX54-201ENST00000306014 TP53I3Q53FA7 332 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 PRRT3Q5FWE3 981 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 ZNF683Q8IZ20 524 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 PHOSPHO1Q8TCT1 267 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 SLC7A13Q8TCU3 470 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 ACOT11Q8WXI4 607 aaPredicted RBP12.51□□□□□ -0.41
DDX54-201ENST00000306014 NSMAFQ92636 917 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 RBFOX1Q9NWB1 397 aaKnown RBP12.51□□□□□ -0.41
DDX54-201ENST00000306014 TGM4P49221 684 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 CHRNEQ04844 493 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 SLX4IPQ5VYV7 408 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 RPL13AP3Q6NVV1 102 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 TMPRSS12Q86WS5 348 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 CLDN22Q8N7P3 220 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 OR52I1Q8NGK6 324 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 OR5H6Q8NGV6 325 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 DNAJA4Q8WW22 397 aaPredicted RBP12.51□□□□□ -0.41
DDX54-201ENST00000306014 RAB7BQ96AH8 199 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 ACTR6Q9GZN1 396 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 FZD3Q9NPG1 666 aa12.51□□□□□ -0.41
DDX54-201ENST00000306014 NPIPA5A0A0B4J1W7 369 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 NPIPA7E9PJI5 369 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 FZD6O60353 706 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 PPP1R3DO95685 299 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 NPIPA8P0DM63 369 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 BMP1P13497 986 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 SPNP16150 400 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 GABRA5P31644 462 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 SLC1A3P43003 542 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 MRPL58Q14197 206 aaKnown RBP12.5□□□□□ -0.41
DDX54-201ENST00000306014 CDK10Q15131 360 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 RAB30Q15771 203 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 HES5Q5TA89 166 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 JAGN1Q8N5M9 183 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 OR6T1Q8NGN1 323 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 C15orf40Q8WUR7 153 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 ZMYND19Q96E35 227 aaPredicted RBP12.5□□□□□ -0.41
DDX54-201ENST00000306014 C16orf58Q96GQ5 468 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 POLDIP3Q9BY77 421 aaKnown RBP12.5□□□□□ -0.41
DDX54-201ENST00000306014 NPAP1Q9NZP6 1156 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 USP36Q9P275 1121 aaKnown RBP12.5□□□□□ -0.41
DDX54-201ENST00000306014 NEU3Q9UQ49 428 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 RFPL3O75679 317 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 ZNF823P16415 610 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 TYRP1P17643 537 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 GIFP27352 417 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 PRAMEF17Q5VTA0 474 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 GALNTL5Q7Z4T8 443 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 SDR16C5Q8N3Y7 309 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 OR6N2Q8NGY6 317 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 OR2L2Q8NH16 312 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 SLC7A6Q92536 515 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 OR51J1Q9H342 316 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 TRPV4Q9HBA0 871 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 GXYLT2A0PJZ3 443 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 WASH3PC4AMC7 463 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 GIMD1P0DJR0 217 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 CTBP2P56545 445 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 CDC20Q12834 499 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 CCNJQ5T5M9 372 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 ZNF776Q68DI1 518 aaPredicted RBP12.5□□□□□ -0.41
DDX54-201ENST00000306014 FAM71E1Q6IPT2 247 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 KLHL24Q6TFL4 600 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 ZNF227Q86WZ6 799 aa12.5□□□□□ -0.41
DDX54-201ENST00000306014 UBQLNLQ8IYU4 475 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms