RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 KLF16Q9BXK1 252 aaPredicted RBP13.17□□□□□ -0.3
PRKCB-201ENST00000303531 HEBP1Q9NRV9 189 aa13.17□□□□□ -0.3
PRKCB-201ENST00000303531 ERVK-19Q9WJR5 959 aa13.17□□□□□ -0.3
PRKCB-201ENST00000303531 PIAS3Q9Y6X2 628 aa13.17□□□□□ -0.3
PRKCB-201ENST00000303531 GSG1LQ6UXU4 331 aa13.17□□□□□ -0.3
PRKCB-201ENST00000303531 ITFG2Q969R8 447 aa13.17□□□□□ -0.3
PRKCB-201ENST00000303531 DDIT4LQ96D03 193 aa13.17□□□□□ -0.3
PRKCB-201ENST00000303531 THSD1Q9NS62 852 aa13.17□□□□□ -0.3
PRKCB-201ENST00000303531 ZDHHC7Q9NXF8 308 aa13.17□□□□□ -0.3
PRKCB-201ENST00000303531 ZNF701M0R085 212 aaPredicted RBP13.17□□□□□ -0.3
PRKCB-201ENST00000303531 NPC1O15118 1278 aa13.17□□□□□ -0.3
PRKCB-201ENST00000303531 IFNA5P01569 189 aa13.17□□□□□ -0.3
PRKCB-201ENST00000303531 CCINQ13939 588 aa13.17□□□□□ -0.3
PRKCB-201ENST00000303531 PLXDC1Q8IUK5 500 aa13.17□□□□□ -0.3
PRKCB-201ENST00000303531 FTMTQ8N4E7 242 aa13.17□□□□□ -0.3
PRKCB-201ENST00000303531 HIF3AQ9Y2N7 669 aa13.17□□□□□ -0.3
PRKCB-201ENST00000303531 HMX3A6NHT5 357 aa13.17□□□□□ -0.3
PRKCB-201ENST00000303531 SEC14L5O43304 696 aa13.17□□□□□ -0.3
PRKCB-201ENST00000303531 GJB3O75712 270 aa13.17□□□□□ -0.3
PRKCB-201ENST00000303531 NKX3-2P78367 333 aa13.17□□□□□ -0.3
PRKCB-201ENST00000303531 GDPGP1Q6ZNW5 385 aa13.17□□□□□ -0.3
PRKCB-201ENST00000303531 CFAP77Q6ZQR2 320 aa13.17□□□□□ -0.3
PRKCB-201ENST00000303531 SMIM14Q96QK8 99 aa13.17□□□□□ -0.3
PRKCB-201ENST00000303531 MMP28Q9H239 520 aa13.17□□□□□ -0.3
PRKCB-201ENST00000303531 MAN2C1Q9NTJ4 1040 aa13.17□□□□□ -0.3
PRKCB-201ENST00000303531 POT1Q9NUX5 634 aa13.17□□□□□ -0.3
PRKCB-201ENST00000303531 PCDHGA8Q9Y5G5 932 aa13.17□□□□□ -0.3
PRKCB-201ENST00000303531 GOSR2O14653 212 aa13.16□□□□□ -0.3
PRKCB-201ENST00000303531 POLR1CO15160 346 aaPredicted RBP13.16□□□□□ -0.3
PRKCB-201ENST00000303531 CCR7P32248 378 aa13.16□□□□□ -0.3
PRKCB-201ENST00000303531 RABIFP47224 123 aa13.16□□□□□ -0.3
PRKCB-201ENST00000303531 PRPS1P60891 318 aa13.16□□□□□ -0.3
PRKCB-201ENST00000303531 TREX2Q9BQ50 279 aaPredicted RBP13.16□□□□□ -0.3
PRKCB-201ENST00000303531 SCN11AQ9UI33 1791 aa13.16□□□□□ -0.3
PRKCB-201ENST00000303531 SDC3O75056 442 aa13.16□□□□□ -0.3
PRKCB-201ENST00000303531 PBX2P40425 430 aa13.16□□□□□ -0.3
PRKCB-201ENST00000303531 TCTE1Q5JU00 501 aa13.16□□□□□ -0.3
PRKCB-201ENST00000303531 DPPA4Q7L190 304 aa13.16□□□□□ -0.3
PRKCB-201ENST00000303531 ATOH8Q96SQ7 321 aa13.16□□□□□ -0.3
PRKCB-201ENST00000303531 HCFC1R1Q9NWW0 138 aa13.16□□□□□ -0.3
PRKCB-201ENST00000303531 ATE1O95260 518 aa13.16□□□□□ -0.3
PRKCB-201ENST00000303531 DIRAS3O95661 229 aa13.16□□□□□ -0.3
PRKCB-201ENST00000303531 CTSL3PQ5NE16 218 aa13.16□□□□□ -0.3
PRKCB-201ENST00000303531 GALNT6Q8NCL4 622 aa13.16□□□□□ -0.3
PRKCB-201ENST00000303531 ALOXE3Q9BYJ1 711 aa13.16□□□□□ -0.3
PRKCB-201ENST00000303531 FTSJ1Q9UET6 329 aa13.16□□□□□ -0.3
PRKCB-201ENST00000303531 RARRES3Q9UL19 164 aa13.16□□□□□ -0.3
PRKCB-201ENST00000303531 HMGN2P05204 90 aaKnown RBP13.16□□□□□ -0.3
PRKCB-201ENST00000303531 ADH6P28332 368 aa13.16□□□□□ -0.3
PRKCB-201ENST00000303531 TRIM46Q7Z4K8 759 aa13.16□□□□□ -0.3
PRKCB-201ENST00000303531 DEDD2Q8WXF8 326 aa13.16□□□□□ -0.3
PRKCB-201ENST00000303531 USP36Q9P275 1121 aaKnown RBP13.16□□□□□ -0.3
PRKCB-201ENST00000303531 MYEF2Q9P2K5 600 aaKnown RBP13.16□□□□□ -0.3
PRKCB-201ENST00000303531 MROH6A6NGR9 719 aa13.16□□□□□ -0.3
PRKCB-201ENST00000303531 CASC3O15234 703 aaKnown RBP13.16□□□□□ -0.3
PRKCB-201ENST00000303531 RIPPLY1Q0D2K3 151 aa13.16□□□□□ -0.3
PRKCB-201ENST00000303531 MALLQ13021 153 aa13.16□□□□□ -0.3
PRKCB-201ENST00000303531 PCGF3Q3KNV8 242 aa13.16□□□□□ -0.3
PRKCB-201ENST00000303531 ZC3H14Q6PJT7 736 aaKnown RBP13.16□□□□□ -0.3
PRKCB-201ENST00000303531 ZNF100Q8IYN0 542 aa13.16□□□□□ -0.3
PRKCB-201ENST00000303531 GPR137CQ8N3F9 429 aa13.16□□□□□ -0.3
PRKCB-201ENST00000303531 TMEM239Q8WW34 195 aa13.16□□□□□ -0.3
PRKCB-201ENST00000303531 SPRYD4Q8WW59 207 aaPredicted RBP13.16□□□□□ -0.3
PRKCB-201ENST00000303531 TCEAL3Q969E4 200 aa13.16□□□□□ -0.3
PRKCB-201ENST00000303531 MACROD1Q9BQ69 325 aa13.16□□□□□ -0.3
PRKCB-201ENST00000303531 TPSD1Q9BZJ3 242 aa13.16□□□□□ -0.3
PRKCB-201ENST00000303531 CLMPQ9H6B4 373 aa13.16□□□□□ -0.3
PRKCB-201ENST00000303531 HRGP04196 525 aa13.16□□□□□ -0.3
PRKCB-201ENST00000303531 CHMP24386 653 aa13.16□□□□□ -0.3
PRKCB-201ENST00000303531 RSU1Q15404 277 aa13.16□□□□□ -0.3
PRKCB-201ENST00000303531 RAB41Q5JT25 222 aa13.16□□□□□ -0.3
PRKCB-201ENST00000303531 DESI1Q6ICB0 168 aa13.16□□□□□ -0.3
PRKCB-201ENST00000303531 FAM43BQ6ZT52 329 aaPredicted RBP13.16□□□□□ -0.3
PRKCB-201ENST00000303531 TBC1D15Q8TC07 691 aa13.16□□□□□ -0.3
PRKCB-201ENST00000303531 CA14Q9ULX7 337 aa13.16□□□□□ -0.3
PRKCB-201ENST00000303531 AK6Q9Y3D8 172 aaKnown RBP13.16□□□□□ -0.3
PRKCB-201ENST00000303531 CEPT1Q9Y6K0 416 aa13.16□□□□□ -0.3
PRKCB-201ENST00000303531 CIB4A0PJX0 185 aa13.15□□□□□ -0.3
PRKCB-201ENST00000303531 ZNF14P17017 642 aaPredicted RBP13.15□□□□□ -0.3
PRKCB-201ENST00000303531 SLC2A5P22732 501 aa13.15□□□□□ -0.3
PRKCB-201ENST00000303531 ITGB7P26010 798 aa13.15□□□□□ -0.3
PRKCB-201ENST00000303531 SSTR4P31391 388 aa13.15□□□□□ -0.3
PRKCB-201ENST00000303531 HNRNPKP61978 463 aaKnown RBP eCLIP13.15□□□□□ -0.33e-7■■■■■ 30.6
PRKCB-201ENST00000303531 ELOAQ14241 798 aaKnown RBP13.15□□□□□ -0.3
PRKCB-201ENST00000303531 NADSYN1Q6IA69 706 aa13.15□□□□□ -0.3
PRKCB-201ENST00000303531 PDZD9Q8IXQ8 264 aa13.15□□□□□ -0.3
PRKCB-201ENST00000303531 NLGN4XQ8N0W4 816 aa13.15□□□□□ -0.3
PRKCB-201ENST00000303531 DNMT3AQ9Y6K1 912 aaPredicted RBP13.15□□□□□ -0.3
PRKCB-201ENST00000303531 NPIPA5A0A0B4J1W7 369 aa13.15□□□□□ -0.3
PRKCB-201ENST00000303531 NPIPA7E9PJI5 369 aa13.15□□□□□ -0.3
PRKCB-201ENST00000303531 NPIPA8P0DM63 369 aa13.15□□□□□ -0.3
PRKCB-201ENST00000303531 PTGER1P34995 402 aa13.15□□□□□ -0.3
PRKCB-201ENST00000303531 ZNF616Q08AN1 781 aa13.15□□□□□ -0.3
PRKCB-201ENST00000303531 GK3PQ14409 553 aa13.15□□□□□ -0.3
PRKCB-201ENST00000303531 ZFP90Q8TF47 636 aa13.15□□□□□ -0.3
PRKCB-201ENST00000303531 SLC6A16Q9GZN6 736 aa13.15□□□□□ -0.3
PRKCB-201ENST00000303531 RNF215Q9Y6U7 377 aa13.15□□□□□ -0.3
PRKCB-201ENST00000303531 A0A0A6YYH2 397 aa13.15□□□□□ -0.3
PRKCB-201ENST00000303531 A6NJ64 397 aa13.15□□□□□ -0.3
PRKCB-201ENST00000303531 CDK1P06493 297 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms