RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 ANKRD65E5RJM6 399 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 KIAA0513O60268 411 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 BCAS1O75363 584 aaPredicted RBP8.71□□□□□ -1.01
RFX3-201ENST00000302303 NEURL1O76050 574 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 WDPCPO95876 746 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 AGR2O95994 175 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 NR2F1P10589 423 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 NCK1P16333 377 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 GGT1P19440 569 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 TCN1P20061 433 aaPredicted RBP8.71□□□□□ -1.01
RFX3-201ENST00000302303 PGM1P36871 562 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 CD97P48960 835 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 RASSF2P50749 326 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 GAS1P54826 345 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 CXADRP78310 365 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 MFAP5Q13361 173 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 TUBA3CQ13748 450 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 SCARB2Q14108 478 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 ZNF141Q15928 474 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 CYP51A1Q16850 503 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 ZNF630Q2M218 657 aaPredicted RBP8.71□□□□□ -1.01
RFX3-201ENST00000302303 SPATS1Q496A3 300 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 KLHL26Q53HC5 615 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 FNDC7Q5VTL7 733 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 HLA-DQA1Q5Y7H0 255 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 REEP3Q6NUK4 255 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 TUBA3EQ6PEY2 450 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 IL20RBQ6UXL0 311 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 LINC00696Q6ZRV3 163 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 HMGN2P46Q86SG4 172 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 ULK2Q8IYT8 1036 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 ARHGAP24Q8N264 748 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 METTL25Q8N6Q8 603 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 C11orf65Q8NCR3 313 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 OR10G3Q8NGC4 313 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 TTC9Q92623 222 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 HAS2Q92819 552 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 EXTL1Q92935 676 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 SPACA9Q96E40 222 aaPredicted RBP8.71□□□□□ -1.01
RFX3-201ENST00000302303 CNTNAP3BQ96NU0 1288 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 KLHDC3Q9BQ90 382 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 WFDC6Q9BQY6 131 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 CNTNAP3Q9BZ76 1288 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 EXD2Q9NVH0 621 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 ANKRD10Q9NXR5 420 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 P2RX2Q9UBL9 471 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 EGFL7Q9UHF1 273 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 AP3M1Q9Y2T2 418 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 PCDHGB3Q9Y5G1 929 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 PCDHGA10Q9Y5H3 936 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 GPC6Q9Y625 555 aaPredicted RBP8.71□□□□□ -1.01
RFX3-201ENST00000302303 EXPH5Q8NEV8 1989 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 CACNA1GO43497 2377 aa8.71□□□□□ -1.02
RFX3-201ENST00000302303 SPENQ96T58 3664 aaKnown RBP8.7□□□□□ -1.02
RFX3-201ENST00000302303 ACACBO00763 2458 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 A0A0G2JPF8 293 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 PRAMEF25A6NGN4 478 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 AGAP5A6NIR3 686 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 CLDN24A6NM45 220 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 HNRNPCL2B2RXH8 293 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 HNRNPCL3B7ZW38 293 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 RRP9O43818 475 aaKnown RBP8.7□□□□□ -1.02
RFX3-201ENST00000302303 SLC28A2O43868 658 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 TPST1O60507 370 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 ICOSLGO75144 302 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 STX11O75558 287 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 REM1O75628 298 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 MFN2O95140 757 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 AK1P00568 194 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 F10P00742 488 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 HNRNPCL4P0DMR1 293 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 CCL3P10147 92 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 TBXA2RP21731 343 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 KDELR2P33947 212 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 HLCSP50747 726 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 SSR4P51571 173 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 AP2B1P63010 937 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 FOXK2Q01167 660 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 DMTNQ08495 405 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 PLCXD2Q0VAA5 305 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 TRIM25Q14258 630 aaKnown RBP8.7□□□□□ -1.02
RFX3-201ENST00000302303 DECR1Q16698 335 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 GRAMD1BQ3KR37 738 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 GLIPR1L2Q4G1C9 344 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 GPAT3Q53EU6 434 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 AGAP7PQ5VUJ5 663 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 PRAMEF8Q5VWM4 474 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 PRAMEF7Q5VXH5 474 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 BICRALQ6AI39 1079 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 SPINK14Q6IE38 97 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 BORAQ6PGQ7 559 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 ISLR2Q6UXK2 745 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 NUP54Q7Z3B4 507 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 C16orf62Q7Z3J2 963 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 TAGAPQ8N103 731 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 ZNF619Q8N2I2 560 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 POGLUT1Q8NBL1 392 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 MDS2Q8NDY4 140 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 HIPK4Q8NE63 616 aa8.7□□□□□ -1.02
RFX3-201ENST00000302303 CATSPER1Q8NEC5 780 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms