RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 ESRRGP62508 458 aa20.68■□□□□ 0.9
SMAD1-201ENST00000302085 BIKQ13323 160 aa20.68■□□□□ 0.9
SMAD1-201ENST00000302085 PTGES3Q15185 160 aaKnown RBP20.68■□□□□ 0.9
SMAD1-201ENST00000302085 ZNHIT3Q15649 155 aaPredicted RBP20.68■□□□□ 0.9
SMAD1-201ENST00000302085 ZER1Q7Z7L7 766 aa20.68■□□□□ 0.9
SMAD1-201ENST00000302085 ZNF615Q8N8J6 731 aa20.68■□□□□ 0.9
SMAD1-201ENST00000302085 OR4K5Q8NGD3 323 aa20.68■□□□□ 0.9
SMAD1-201ENST00000302085 CEP76Q8TAP6 659 aa20.68■□□□□ 0.9
SMAD1-201ENST00000302085 ZNF578Q96N58 590 aaPredicted RBP20.68■□□□□ 0.9
SMAD1-201ENST00000302085 MCHR1Q99705 422 aa20.68■□□□□ 0.9
SMAD1-201ENST00000302085 DPYSL5Q9BPU6 564 aa20.68■□□□□ 0.9
SMAD1-201ENST00000302085 PELOQ9BRX2 385 aaKnown RBP20.68■□□□□ 0.9
SMAD1-201ENST00000302085 OR10A5Q9H207 317 aa20.68■□□□□ 0.9
SMAD1-201ENST00000302085 ADAMTS20P59510 1910 aa20.68■□□□□ 0.9
SMAD1-201ENST00000302085 PRAMEF2O60811 474 aa20.68■□□□□ 0.9
SMAD1-201ENST00000302085 ZNF136P52737 540 aa20.68■□□□□ 0.9
SMAD1-201ENST00000302085 TARDBPQ13148 414 aaKnown RBP eCLIP20.68■□□□□ 0.9
SMAD1-201ENST00000302085 PROX2Q3B8N5 592 aa20.68■□□□□ 0.9
SMAD1-201ENST00000302085 TRIM61Q5EBN2 209 aa20.68■□□□□ 0.9
SMAD1-201ENST00000302085 ENTPD8Q5MY95 495 aa20.68■□□□□ 0.9
SMAD1-201ENST00000302085 C1orf189Q5VU69 101 aa20.68■□□□□ 0.9
SMAD1-201ENST00000302085 TMEM236Q5W0B7 351 aa20.68■□□□□ 0.9
SMAD1-201ENST00000302085 NPSR1Q6W5P4 371 aa20.68■□□□□ 0.9
SMAD1-201ENST00000302085 SPARTQ8N0X7 666 aa20.68■□□□□ 0.9
SMAD1-201ENST00000302085 FAM81AQ8TBF8 368 aa20.68■□□□□ 0.9
SMAD1-201ENST00000302085 PTPMT1Q8WUK0 201 aaPredicted RBP20.68■□□□□ 0.9
SMAD1-201ENST00000302085 LRRN3Q9H3W5 708 aa20.68■□□□□ 0.9
SMAD1-201ENST00000302085 ZNF226Q9NYT6 803 aa20.68■□□□□ 0.9
SMAD1-201ENST00000302085 ENOPH1Q9UHY7 261 aa20.68■□□□□ 0.9
SMAD1-201ENST00000302085 SLC6A14Q9UN76 642 aa20.68■□□□□ 0.9
SMAD1-201ENST00000302085 IGKV3D-11A0A0A0MRZ8 115 aa20.67■□□□□ 0.9
SMAD1-201ENST00000302085 ZAR1LA6NP61 321 aa20.67■□□□□ 0.9
SMAD1-201ENST00000302085 IGFBP1P08833 259 aaPredicted RBP20.67■□□□□ 0.9
SMAD1-201ENST00000302085 ANKRD34CP0C6C1 535 aa20.67■□□□□ 0.9
SMAD1-201ENST00000302085 OSMP13725 252 aa20.67■□□□□ 0.9
SMAD1-201ENST00000302085 NID1P14543 1247 aa20.67■□□□□ 0.9
SMAD1-201ENST00000302085 FBLP22087 321 aaKnown RBP20.67■□□□□ 0.9
SMAD1-201ENST00000302085 RNF144AP50876 292 aaPredicted RBP20.67■□□□□ 0.9
SMAD1-201ENST00000302085 UGT2B15P54855 530 aa20.67■□□□□ 0.9
SMAD1-201ENST00000302085 ZBED5Q49AG3 693 aa20.67■□□□□ 0.9
SMAD1-201ENST00000302085 EIPR1Q53HC9 387 aa20.67■□□□□ 0.9
SMAD1-201ENST00000302085 YOD1Q5VVQ6 348 aaPredicted RBP20.67■□□□□ 0.9
SMAD1-201ENST00000302085 OR4D9Q8NGE8 314 aa20.67■□□□□ 0.9
SMAD1-201ENST00000302085 C16orf52Q8NHV5 167 aa20.67■□□□□ 0.9
SMAD1-201ENST00000302085 RHOXF1Q8NHV9 184 aa20.67■□□□□ 0.9
SMAD1-201ENST00000302085 TSLPQ969D9 159 aa20.67■□□□□ 0.9
SMAD1-201ENST00000302085 A0A087WUU8 490 aa20.66■□□□□ 0.9
SMAD1-201ENST00000302085 IGHV5-10-1A0A0J9YXX1 117 aa20.66■□□□□ 0.9
SMAD1-201ENST00000302085 A0A1B0GX78 115 aa20.66■□□□□ 0.9
SMAD1-201ENST00000302085 C17orf105B2RV13 164 aa20.66■□□□□ 0.9
SMAD1-201ENST00000302085 ARHGAP33O14559 1287 aa20.66■□□□□ 0.9
SMAD1-201ENST00000302085 AP3D1O14617 1153 aa20.66■□□□□ 0.9
SMAD1-201ENST00000302085 NTN1O95631 604 aa20.66■□□□□ 0.9
SMAD1-201ENST00000302085 THY1P04216 161 aa20.66■□□□□ 0.9
SMAD1-201ENST00000302085 GUSBP08236 651 aa20.66■□□□□ 0.9
SMAD1-201ENST00000302085 MMP11P24347 488 aa20.66■□□□□ 0.9
SMAD1-201ENST00000302085 CNR2P34972 360 aa20.66■□□□□ 0.9
SMAD1-201ENST00000302085 EFNA3P52797 238 aa20.66■□□□□ 0.9
SMAD1-201ENST00000302085 ILKQ13418 452 aa20.66■□□□□ 0.9
SMAD1-201ENST00000302085 TRAM2Q15035 370 aa20.66■□□□□ 0.9
SMAD1-201ENST00000302085 MRPL2Q5T653 305 aaKnown RBP20.66■□□□□ 0.9
SMAD1-201ENST00000302085 LINC00471Q8N535 108 aa20.66■□□□□ 0.9
SMAD1-201ENST00000302085 RCBTB1Q8NDN9 531 aa20.66■□□□□ 0.9
SMAD1-201ENST00000302085 RNF31Q96EP0 1072 aa20.66■□□□□ 0.9
SMAD1-201ENST00000302085 DUSP21Q9H596 190 aa20.66■□□□□ 0.9
SMAD1-201ENST00000302085 FANCEQ9HB96 536 aa20.66■□□□□ 0.9
SMAD1-201ENST00000302085 PNO1Q9NRX1 252 aaKnown RBP20.66■□□□□ 0.9
SMAD1-201ENST00000302085 SEC16AO15027 2179 aa20.66■□□□□ 0.9
SMAD1-201ENST00000302085 TP53P04637 393 aaPredicted RBP20.66■□□□□ 0.9
SMAD1-201ENST00000302085 CT45A8P0DMV1 189 aa20.66■□□□□ 0.9
SMAD1-201ENST00000302085 CT45A9P0DMV2 189 aa20.66■□□□□ 0.9
SMAD1-201ENST00000302085 JUNBP17275 347 aaPredicted RBP20.66■□□□□ 0.9
SMAD1-201ENST00000302085 POU1F1P28069 291 aa20.66■□□□□ 0.9
SMAD1-201ENST00000302085 KRT20P35900 424 aa20.66■□□□□ 0.9
SMAD1-201ENST00000302085 RFX3P48380 749 aa20.66■□□□□ 0.9
SMAD1-201ENST00000302085 IDH2P48735 452 aaKnown RBP20.66■□□□□ 0.9
SMAD1-201ENST00000302085 ST3GAL3Q11203 375 aa20.66■□□□□ 0.9
SMAD1-201ENST00000302085 NEDD8Q15843 81 aa20.66■□□□□ 0.9
SMAD1-201ENST00000302085 CT45A2Q5DJT8 189 aa20.66■□□□□ 0.9
SMAD1-201ENST00000302085 VWA2Q5GFL6 755 aa20.66■□□□□ 0.9
SMAD1-201ENST00000302085 MFSD4BQ5TF39 518 aa20.66■□□□□ 0.9
SMAD1-201ENST00000302085 XAF1Q6GPH4 301 aa20.66■□□□□ 0.9
SMAD1-201ENST00000302085 C1orf94Q6P1W5 598 aa20.66■□□□□ 0.9
SMAD1-201ENST00000302085 SLC23A3Q6PIS1 610 aa20.66■□□□□ 0.9
SMAD1-201ENST00000302085 QSOX2Q6ZRP7 698 aa20.66■□□□□ 0.9
SMAD1-201ENST00000302085 PLEKHM3Q6ZWE6 761 aa20.66■□□□□ 0.9
SMAD1-201ENST00000302085 GPR141Q7Z602 305 aa20.66■□□□□ 0.9
SMAD1-201ENST00000302085 SLC38A4Q969I6 547 aa20.66■□□□□ 0.9
SMAD1-201ENST00000302085 SENP5Q96HI0 755 aaPredicted RBP20.66■□□□□ 0.9
SMAD1-201ENST00000302085 GPA33Q99795 319 aa20.66■□□□□ 0.9
SMAD1-201ENST00000302085 POLR2J3Q9H1A7 115 aaKnown RBP20.66■□□□□ 0.9
SMAD1-201ENST00000302085 ERVK-18Q9QC07 812 aa20.66■□□□□ 0.9
SMAD1-201ENST00000302085 TPRKBQ9Y3C4 175 aa20.66■□□□□ 0.9
SMAD1-201ENST00000302085 CDHR4A6H8M9 788 aa20.65■□□□□ 0.9
SMAD1-201ENST00000302085 CCDC160A6NGH7 325 aa20.65■□□□□ 0.9
SMAD1-201ENST00000302085 AGRPO00253 132 aa20.65■□□□□ 0.9
SMAD1-201ENST00000302085 BCAS1O75363 584 aaPredicted RBP20.65■□□□□ 0.9
SMAD1-201ENST00000302085 PRG2P13727 222 aa20.65■□□□□ 0.9
SMAD1-201ENST00000302085 GABRB1P18505 474 aa20.65■□□□□ 0.9
SMAD1-201ENST00000302085 RHAGQ02094 409 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms